EnhancerDB
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  3. vista50815[chr6:11365255-11365579]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50815[chr6:11365255-11365579]
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Tissue distribution of vista50815
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Transcription factor that possibly regulate vista50815[chr6:11365255-11365579]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11365242 11365533 NR3C1 UCSC Txn Factor no Conserved 108538387
chr6 11365256 11365277 ZNF263 JASPAR yes 70308845
chr6 11365256 11365277 ZNF263 JASPAR yes 99879682
chr6 11365271 11365276 SP1 TRANSFAC yes 70308846
chr6 11365271 11365276 SP1 TRANSFAC yes 99879683
chr6 11365275 11365280 SP1 TRANSFAC yes 70308847
chr6 11365275 11365280 SP1 TRANSFAC yes 99879684
chr6 11365278 11365282 LFA1 TRANSFAC yes 70308848
chr6 11365278 11365282 LFA1 TRANSFAC yes 99879685
chr6 11365302 11365314 YY1 JASPAR yes 70308849
chr6 11365302 11365314 YY1 JASPAR yes 99879686
chr6 11365304 11365315 YY2 JASPAR yes 70308850
chr6 11365304 11365315 YY2 JASPAR yes 99879687
chr6 11365305 11365311 YY1 JASPAR yes 70308851
chr6 11365305 11365311 YY1 JASPAR yes 99879688
chr6 11365330 11365344 GLIS2 JASPAR yes 70308852
chr6 11365330 11365344 GLIS3 JASPAR yes 70308853
chr6 11365330 11365344 GLIS2 JASPAR yes 99879689
chr6 11365330 11365344 GLIS3 JASPAR yes 99879690
chr6 11365342 11365357 AR JASPAR yes 70308854
chr6 11365342 11365357 AR JASPAR yes 99879691
chr6 11365351 11365355 NFE TRANSFAC yes 70308855
chr6 11365351 11365355 NFE TRANSFAC yes 99879692
chr6 11365351 11365364 SMAD2 JASPAR yes 70308856
chr6 11365351 11365364 SMAD2 JASPAR yes 99879693
chr6 11365365 11365380 AR JASPAR yes 70308857
chr6 11365365 11365380 AR JASPAR yes 99879694
chr6 11365365 11365382 NR3C1 JASPAR yes 70308858
chr6 11365365 11365382 NR3C2 JASPAR yes 70308859
chr6 11365365 11365382 NR3C1 JASPAR yes 99879695
chr6 11365365 11365382 NR3C2 JASPAR yes 99879696
chr6 11365367 11365374 NKX3-1 JASPAR yes 70308860
chr6 11365367 11365374 NKX3-1 JASPAR yes 99879697
chr6 11365367 11365382 AR JASPAR yes 70308861
chr6 11365367 11365382 AR JASPAR yes 99879698
chr6 11365377 11365389 FOXI1 JASPAR yes 70308862
chr6 11365377 11365389 FOXI1 JASPAR yes 99879699
chr6 11365393 11365397 YY1 TRANSFAC yes 70308863
chr6 11365393 11365397 YY1 TRANSFAC yes 99879700
chr6 11365394 11365405 CEBPA JASPAR yes 70308864
chr6 11365394 11365405 CEBPA JASPAR yes 99879701
chr6 11365406 11365427 ZNF263 JASPAR yes 70308865
chr6 11365406 11365427 ZNF263 JASPAR yes 99879702
chr6 11365409 11365419 MZF1 JASPAR yes 70308866
chr6 11365409 11365419 MZF1 JASPAR yes 99879703
chr6 11365412 11365418 SP1 TRANSFAC yes 70308867
chr6 11365412 11365418 SP1 TRANSFAC yes 99879704
chr6 11365420 11365434 TCF7L2 JASPAR yes 70308868
chr6 11365420 11365434 TCF7L2 JASPAR yes 99879705
chr6 11365425 11365434 NKX2-8 JASPAR yes 70308869
chr6 11365425 11365434 NKX2-8 JASPAR yes 99879706
chr6 11365425 11365435 NKX2-3 JASPAR yes 70308870
chr6 11365425 11365435 NKX2-3 JASPAR yes 99879707
chr6 11365435 11365443 LBX1 JASPAR yes 70308871
chr6 11365435 11365443 LBX1 JASPAR yes 99879708
chr6 11365449 11365463 SPI1 JASPAR yes 70308872
chr6 11365449 11365463 SPIC JASPAR yes 70308873
chr6 11365449 11365463 SPI1 JASPAR yes 99879709
chr6 11365449 11365463 SPIC JASPAR yes 99879710
chr6 11365460 11365470 NFATC3 JASPAR yes 70308874
chr6 11365460 11365470 NFATC3 JASPAR yes 99879711
chr6 11365476 11365487 USF1 JASPAR yes 70308875
chr6 11365476 11365487 USF1 JASPAR yes 99879712
chr6 11365489 11365499 TEAD1 JASPAR yes 70308876
chr6 11365489 11365499 TEAD4 JASPAR yes 70308877
chr6 11365489 11365499 TEAD1 JASPAR yes 99879713
chr6 11365489 11365499 TEAD4 JASPAR yes 99879714
chr6 11365490 11365498 TEAD3 JASPAR yes 70308878
chr6 11365490 11365498 TEAD3 JASPAR yes 99879715
chr6 11365499 11365516 RARA JASPAR yes 70308879
chr6 11365499 11365516 RARA JASPAR yes 99879716
chr6 11365509 11365523 RORA JASPAR yes 70308880
chr6 11365509 11365523 RORA JASPAR yes 99879717
chr6 11365521 11365536 FOXP1 JASPAR yes 70308881
chr6 11365521 11365536 FOXP1 JASPAR yes 99879718
chr6 11365526 11365544 NR3C1 JASPAR yes 70308882
chr6 11365526 11365544 NR3C1 JASPAR yes 99879719
chr6 11365529 11365539 MSC JASPAR yes 70308883
chr6 11365529 11365539 MYF6 JASPAR yes 70308884
chr6 11365529 11365539 MSC JASPAR yes 99879720
chr6 11365529 11365539 MYF6 JASPAR yes 99879721
chr6 11365534 11365544 GABPA JASPAR yes 70308885
chr6 11365534 11365544 GABPA JASPAR yes 99879722
chr6 11365534 11365547 ELF1 JASPAR yes 70308886
chr6 11365534 11365547 ELF1 JASPAR yes 99879723
chr6 11365537 11365548 NRL JASPAR yes 70308887
chr6 11365537 11365548 NRL JASPAR yes 99879724
chr6 11365556 11365560 TEAD2 TRANSFAC yes 70308888
chr6 11365556 11365560 TEAD2 TRANSFAC yes 99879725
chr6 11365560 11365569 JDP2 JASPAR yes 70308889
chr6 11365560 11365569 JDP2 JASPAR yes 99879726
chr6 11365579 11365599 PPARG JASPAR yes 70308890
chr6 11365579 11365599 PPARG JASPAR yes 99879727
SNP sites on vista50815[chr6:11365255-11365579]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11365358 rs201554411 GACAA G
NR3C1 SMAD2
8830222
chr6 11365362 rs141405417 A AACAC
NR3C1 SMAD2
8830223
chr6 11365382 rs112355852 G C
AR FOXI1 NR3C1 NR3C2
8830224
chr6 11365469 rs184704646 T C
NFATC3 NR3C1
8830225
chr6 11365491 rs1012502 A G
NR3C1 TEAD1 TEAD3 TEAD4
8830226
chr6 11365550 rs111830379 G A no 8830227
Genes possibly regulated by vista50815[chr6:11365255-11365579]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 82998
Expression level of Genes
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miRNAs possibly regulated by vista50815[chr6:11365255-11365579]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results