EnhancerDB
  1. Home
  2. Enhancers
  3. vista50823[chr6:11399331-11399472]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50823[chr6:11399331-11399472]
Back to top
Tissue distribution of vista50823
Back to top
Transcription factor that possibly regulate vista50823[chr6:11399331-11399472]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11399175 11399565 EP300 UCSC Txn Factor no Conserved 108538418
chr6 11399211 11399558 NFIC UCSC Txn Factor no Conserved 108538419
chr6 11399220 11399516 HNF4A UCSC Txn Factor no Conserved 108538420
chr6 11399228 11399552 CEBPB UCSC Txn Factor no Conserved 108538421
chr6 11399253 11399497 HNF4G UCSC Txn Factor no Conserved 108538422
chr6 11399333 11399338 TFAP2A TRANSFAC yes 70309235
chr6 11399333 11399338 TFAP2A TRANSFAC yes 99884000
chr6 11399333 11399339 MZF1 JASPAR yes 70309236
chr6 11399333 11399339 MZF1 JASPAR yes 99884001
chr6 11399346 11399361 HNF4A JASPAR yes 70309237
chr6 11399346 11399361 HNF4A JASPAR yes 99884002
chr6 11399347 11399362 HNF4G JASPAR yes 70309238
chr6 11399347 11399362 LEF1 JASPAR yes 70309239
chr6 11399347 11399362 HNF4G JASPAR yes 99884003
chr6 11399347 11399362 LEF1 JASPAR yes 99884004
chr6 11399348 11399362 TCF7L2 JASPAR yes 70309240
chr6 11399348 11399362 TCF7L2 JASPAR yes 99884005
chr6 11399351 11399357 LEF1 TRANSFAC yes 70309241
chr6 11399351 11399357 TCF4 TRANSFAC yes 70309242
chr6 11399351 11399357 LEF1 TRANSFAC yes 99884006
chr6 11399351 11399357 TCF4 TRANSFAC yes 99884007
chr6 11399360 11399364 LFA1 TRANSFAC yes 70309243
chr6 11399360 11399364 LFA1 TRANSFAC yes 99884008
chr6 11399371 11399383 DBP JASPAR yes 70309244
chr6 11399371 11399383 HLF JASPAR yes 70309245
chr6 11399371 11399383 TEF JASPAR yes 70309246
chr6 11399371 11399383 DBP JASPAR yes 99884009
chr6 11399371 11399383 HLF JASPAR yes 99884010
chr6 11399371 11399383 TEF JASPAR yes 99884011
chr6 11399371 11399384 ATF4 JASPAR yes 70309247
chr6 11399371 11399384 ATF4 JASPAR yes 99884012
chr6 11399372 11399382 CEBPB JASPAR yes 70309248
chr6 11399372 11399382 CEBPD JASPAR yes 70309249
chr6 11399372 11399382 CEBPE JASPAR yes 70309250
chr6 11399372 11399382 CEBPG JASPAR yes 70309251
chr6 11399372 11399382 CEBPB JASPAR yes 99884013
chr6 11399372 11399382 CEBPD JASPAR yes 99884014
chr6 11399372 11399382 CEBPE JASPAR yes 99884015
chr6 11399372 11399382 CEBPG JASPAR yes 99884016
chr6 11399377 11399394 BCL6B JASPAR yes 70309252
chr6 11399377 11399394 BCL6B JASPAR yes 99884017
chr6 11399397 11399415 MAFF JASPAR yes 70309253
chr6 11399397 11399415 MAFF JASPAR yes 99884018
chr6 11399398 11399413 MAFK JASPAR yes 70309254
chr6 11399398 11399413 MAFK JASPAR yes 99884019
chr6 11399403 11399418 MEF2C JASPAR yes 70309255
chr6 11399403 11399418 MEF2C JASPAR yes 99884020
chr6 11399404 11399419 MEF2A JASPAR yes 70309256
chr6 11399404 11399419 MEF2A JASPAR yes 99884021
chr6 11399423 11399434 NFIL3 JASPAR yes 70309257
chr6 11399423 11399434 NFIL3 JASPAR yes 99884022
chr6 11399428 11399440 PBX1 JASPAR yes 70309258
chr6 11399428 11399440 PBX1 JASPAR yes 99884023
chr6 11399437 11399455 NR3C1 JASPAR yes 70309259
chr6 11399437 11399455 NR3C1 JASPAR yes 99884024
SNP sites on vista50823[chr6:11399331-11399472]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11399378 rs77812806 G A
ATF4 BCL6B CEBPB CEBPD CEBPE CEBPG DBP EP300 HLF HNF4A HNF4G NFIC TEF
8830606
Genes possibly regulated by vista50823[chr6:11399331-11399472]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 83250
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50823[chr6:11399331-11399472]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results