EnhancerDB
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  3. vista50825[chr6:11405070-11405367]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50825[chr6:11405070-11405367]
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Tissue distribution of vista50825
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Transcription factor that possibly regulate vista50825[chr6:11405070-11405367]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11405059 11405074 MEF2C JASPAR yes 70309297
chr6 11405059 11405074 MEF2C JASPAR yes 99884660
chr6 11405060 11405075 MEF2A JASPAR yes 70309298
chr6 11405060 11405075 MEF2A JASPAR yes 99884661
chr6 11405061 11405073 MEF2A JASPAR yes 70309299
chr6 11405061 11405073 MEF2B JASPAR yes 70309300
chr6 11405061 11405073 MEF2D JASPAR yes 70309301
chr6 11405061 11405073 MEF2A JASPAR yes 99884662
chr6 11405061 11405073 MEF2B JASPAR yes 99884663
chr6 11405061 11405073 MEF2D JASPAR yes 99884664
chr6 11405062 11405072 MEF2A JASPAR yes 70309302
chr6 11405062 11405072 MEF2A JASPAR yes 99884665
chr6 11405067 11405082 FOXP1 JASPAR yes 70309303
chr6 11405067 11405082 FOXP1 JASPAR yes 99884666
chr6 11405067 11405088 IRF1 JASPAR yes 70309304
chr6 11405067 11405088 IRF1 JASPAR yes 99884667
chr6 11405069 11405075 TBP TRANSFAC yes 70309305
chr6 11405069 11405075 TBP TRANSFAC yes 99884668
chr6 11405071 11405086 STAT2 JASPAR yes 70309306
chr6 11405071 11405086 STAT2 JASPAR yes 99884669
chr6 11405096 11405107 GCM1 JASPAR yes 70309307
chr6 11405096 11405107 GCM1 JASPAR yes 99884670
chr6 11405105 11405116 EBF1 JASPAR yes 70309308
chr6 11405105 11405116 EBF1 JASPAR yes 99884671
chr6 11405142 11405157 MEF2A JASPAR yes 70309309
chr6 11405142 11405157 MEF2A JASPAR yes 99884672
chr6 11405143 11405158 MEF2C JASPAR yes 70309310
chr6 11405143 11405158 MEF2C JASPAR yes 99884673
chr6 11405144 11405156 MEF2A JASPAR yes 70309311
chr6 11405144 11405156 MEF2B JASPAR yes 70309312
chr6 11405144 11405156 MEF2D JASPAR yes 70309313
chr6 11405144 11405156 MEF2A JASPAR yes 99884674
chr6 11405144 11405156 MEF2B JASPAR yes 99884675
chr6 11405144 11405156 MEF2D JASPAR yes 99884676
chr6 11405145 11405155 MEF2A JASPAR yes 70309314
chr6 11405145 11405155 MEF2A JASPAR yes 99884677
chr6 11405146 11405150 YY1 TRANSFAC yes 70309315
chr6 11405146 11405150 YY1 TRANSFAC yes 99884678
chr6 11405158 11405175 RARA JASPAR yes 70309316
chr6 11405158 11405175 RARA JASPAR yes 99884679
chr6 11405163 11405175 TFAP2B JASPAR yes 70309317
chr6 11405163 11405175 TFAP2C JASPAR yes 70309318
chr6 11405163 11405175 TFAP2B JASPAR yes 99884680
chr6 11405163 11405175 TFAP2C JASPAR yes 99884681
chr6 11405170 11405174 LFA1 TRANSFAC yes 70309319
chr6 11405170 11405174 LFA1 TRANSFAC yes 99884682
chr6 11405200 11405212 POU3F1 JASPAR yes 70309320
chr6 11405200 11405212 POU3F2 JASPAR yes 70309321
chr6 11405200 11405212 POU3F1 JASPAR yes 99884683
chr6 11405200 11405212 POU3F2 JASPAR yes 99884684
chr6 11405201 11405205 YY1 TRANSFAC yes 70309322
chr6 11405201 11405205 YY1 TRANSFAC yes 99884685
chr6 11405205 11405218 POU3F3 JASPAR yes 70309323
chr6 11405205 11405218 POU3F3 JASPAR yes 99884686
chr6 11405205 11405219 POU1F1 JASPAR yes 70309324
chr6 11405205 11405219 POU1F1 JASPAR yes 99884687
chr6 11405206 11405218 POU3F1 JASPAR yes 70309325
chr6 11405206 11405218 POU3F2 JASPAR yes 70309326
chr6 11405206 11405218 POU3F1 JASPAR yes 99884688
chr6 11405206 11405218 POU3F2 JASPAR yes 99884689
chr6 11405206 11405219 POU2F2 JASPAR yes 70309327
chr6 11405206 11405219 POU2F2 JASPAR yes 99884690
chr6 11405207 11405216 POU3F4 JASPAR yes 70309328
chr6 11405207 11405216 POU5F1B JASPAR yes 70309329
chr6 11405207 11405216 POU3F4 JASPAR yes 99884691
chr6 11405207 11405216 POU5F1B JASPAR yes 99884692
chr6 11405213 11405234 IRF1 JASPAR yes 70309330
chr6 11405213 11405234 IRF1 JASPAR yes 99884693
chr6 11405215 11405230 STAT2 JASPAR yes 70309331
chr6 11405215 11405230 STAT2 JASPAR yes 99884694
chr6 11405216 11405230 STAT1 JASPAR yes 70309332
chr6 11405216 11405230 STAT1 JASPAR yes 99884695
chr6 11405217 11405232 IRF9 JASPAR yes 70309333
chr6 11405217 11405232 IRF9 JASPAR yes 99884696
chr6 11405286 11405289 MYB TRANSFAC yes 70309334
chr6 11405286 11405289 MYB TRANSFAC yes 99884697
chr6 11405296 11405317 ZNF263 JASPAR yes 70309335
chr6 11405296 11405317 ZNF263 JASPAR yes 99884698
chr6 11405297 11405318 ZNF263 JASPAR yes 70309336
chr6 11405297 11405318 ZNF263 JASPAR yes 99884699
chr6 11405304 11405318 SPI1 JASPAR yes 70309337
chr6 11405304 11405318 SPIC JASPAR yes 70309338
chr6 11405304 11405318 SPI1 JASPAR yes 99884700
chr6 11405304 11405318 SPIC JASPAR yes 99884701
chr6 11405305 11405315 MZF1 JASPAR yes 70309339
chr6 11405305 11405315 MZF1 JASPAR yes 99884702
chr6 11405305 11405326 ZNF263 JASPAR yes 70309340
chr6 11405305 11405326 ZNF263 JASPAR yes 99884703
chr6 11405308 11405313 TFAP2A TRANSFAC yes 70309341
chr6 11405308 11405313 TFAP2A TRANSFAC yes 99884704
chr6 11405308 11405314 MZF1 JASPAR yes 70309342
chr6 11405308 11405314 MZF1 JASPAR yes 99884705
chr6 11405308 11405329 ZNF263 JASPAR yes 70309343
chr6 11405308 11405329 ZNF263 JASPAR yes 99884706
chr6 11405309 11405319 SP1 JASPAR yes 70309344
chr6 11405309 11405319 SP1 JASPAR yes 99884707
chr6 11405309 11405330 ZNF263 JASPAR yes 70309345
chr6 11405309 11405330 ZNF263 JASPAR yes 99884708
chr6 11405310 11405315 ETS2 TRANSFAC yes 70309346
chr6 11405310 11405315 ETS2 TRANSFAC yes 99884709
chr6 11405317 11405322 GATA2 JASPAR yes 70309347
chr6 11405317 11405322 GATA2 JASPAR yes 99884710
chr6 11405317 11405331 SPI1 JASPAR yes 70309348
chr6 11405317 11405331 SPI1 JASPAR yes 99884711
chr6 11405322 11405332 SP1 JASPAR yes 70309349
chr6 11405322 11405332 SP1 JASPAR yes 99884712
chr6 11405323 11405328 ETS2 TRANSFAC yes 70309350
chr6 11405323 11405328 ETS2 TRANSFAC yes 99884713
chr6 11405333 11405345 TFAP2A JASPAR yes 70309351
chr6 11405333 11405345 TFAP2B JASPAR yes 70309352
chr6 11405333 11405345 TFAP2C JASPAR yes 70309353
chr6 11405333 11405345 TFAP2A JASPAR yes 99884714
chr6 11405333 11405345 TFAP2B JASPAR yes 99884715
chr6 11405333 11405345 TFAP2C JASPAR yes 99884716
chr6 11405333 11405348 TFAP2A JASPAR yes 70309354
chr6 11405333 11405348 TFAP2C JASPAR yes 70309355
chr6 11405333 11405348 TFAP2A JASPAR yes 99884717
chr6 11405333 11405348 TFAP2C JASPAR yes 99884718
chr6 11405335 11405344 TFAP2A JASPAR yes 70309356
chr6 11405335 11405344 TFAP2A JASPAR yes 99884719
chr6 11405340 11405344 LFA1 TRANSFAC yes 70309357
chr6 11405340 11405344 LFA1 TRANSFAC yes 99884720
chr6 11405347 11405356 NKX2-8 JASPAR yes 70309358
chr6 11405347 11405356 NKX2-8 JASPAR yes 99884721
chr6 11405352 11405363 FLI1 JASPAR yes 70309359
chr6 11405352 11405363 FLI1 JASPAR yes 99884722
chr6 11405354 11405361 SPI1 JASPAR yes 70309360
chr6 11405354 11405361 SPI1 JASPAR yes 99884723
chr6 11405354 11405362 FEV JASPAR yes 70309361
chr6 11405354 11405362 FEV JASPAR yes 99884724
chr6 11405356 11405361 ETS2 TRANSFAC yes 70309362
chr6 11405356 11405361 ETS2 TRANSFAC yes 99884725
chr6 11405357 11405370 EOMES JASPAR yes 70309363
chr6 11405357 11405370 EOMES JASPAR yes 99884726
chr6 11405359 11405369 TBR1 JASPAR yes 70309364
chr6 11405359 11405369 TBR1 JASPAR yes 99884727
chr6 11405359 11405370 TBX20 JASPAR yes 70309365
chr6 11405359 11405370 TBX2 JASPAR yes 70309366
chr6 11405359 11405370 TBX20 JASPAR yes 99884728
chr6 11405359 11405370 TBX2 JASPAR yes 99884729
chr6 11405360 11405370 TBX21 JASPAR yes 70309367
chr6 11405360 11405370 TBX21 JASPAR yes 99884730
chr6 11405366 11405370 YY1 TRANSFAC yes 70309368
chr6 11405366 11405370 YY1 TRANSFAC yes 99884731
SNP sites on vista50825[chr6:11405070-11405367]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11405081 rs530565808 A C
FOXP1 IRF1 STAT2
8830689
chr6 11405082 rs35695091 AC A
FOXP1 IRF1 STAT2
8830690
chr6 11405082 rs35706534 AC A
FOXP1 IRF1 STAT2
8830691
chr6 11405083 rs61299746 C A
IRF1 STAT2
8830692
chr6 11405291 rs11970100 G A no 8830693
chr6 11405294 rs57976753 C T no 8830694
Genes possibly regulated by vista50825[chr6:11405070-11405367]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 77511
Expression level of Genes
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miRNAs possibly regulated by vista50825[chr6:11405070-11405367]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results