EnhancerDB
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  3. vista50830[chr6:11439294-11439659]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50830[chr6:11439294-11439659]
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Tissue distribution of vista50830
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Transcription factor that possibly regulate vista50830[chr6:11439294-11439659]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11439291 11439306 RUNX2 JASPAR yes 70309673
chr6 11439291 11439306 RUNX2 JASPAR yes 99889760
chr6 11439294 11439305 RUNX1 JASPAR yes 70309674
chr6 11439294 11439305 RUNX1 JASPAR yes 99889761
chr6 11439333 11439342 VENTX JASPAR yes 70309675
chr6 11439333 11439342 VENTX JASPAR yes 99889762
chr6 11439336 11439340 YY1 TRANSFAC yes 70309676
chr6 11439336 11439340 YY1 TRANSFAC yes 99889763
chr6 11439339 11439350 FLI1 JASPAR yes 70309677
chr6 11439339 11439350 FLI1 JASPAR yes 99889764
chr6 11439341 11439349 FEV JASPAR yes 70309678
chr6 11439341 11439349 FEV JASPAR yes 99889765
chr6 11439359 11439368 NKX2-8 JASPAR yes 70309679
chr6 11439359 11439368 NKX2-8 JASPAR yes 99889766
chr6 11439359 11439369 NKX2-3 JASPAR yes 70309680
chr6 11439359 11439369 NKX2-3 JASPAR yes 99889767
chr6 11439365 11439376 FOXA1 JASPAR yes 70309681
chr6 11439365 11439376 FOXA1 JASPAR yes 99889768
chr6 11439370 11439385 STAT1 JASPAR yes 70309682
chr6 11439370 11439385 STAT1 JASPAR yes 99889769
chr6 11439372 11439383 STAT1 JASPAR yes 70309683
chr6 11439372 11439383 STAT3 JASPAR yes 70309684
chr6 11439372 11439383 STAT1 JASPAR yes 99889770
chr6 11439372 11439383 STAT3 JASPAR yes 99889771
chr6 11439379 11439388 SOX9 JASPAR yes 70309685
chr6 11439379 11439388 SOX9 JASPAR yes 99889772
chr6 11439389 11439396 SPI1 JASPAR yes 70309686
chr6 11439389 11439396 SPI1 JASPAR yes 99889773
chr6 11439400 11439403 MYB TRANSFAC yes 70309687
chr6 11439400 11439403 MYB TRANSFAC yes 99889774
chr6 11439424 11439439 SCRT1 JASPAR yes 70309688
chr6 11439424 11439439 SCRT1 JASPAR yes 99889775
chr6 11439447 11439457 NFATC3 JASPAR yes 70309689
chr6 11439447 11439457 NFATC3 JASPAR yes 99889776
chr6 11439449 11439456 NFATC2 JASPAR yes 70309690
chr6 11439449 11439456 NFATC2 JASPAR yes 99889777
chr6 11439453 11439471 RARA JASPAR yes 70309691
chr6 11439453 11439471 RARA JASPAR yes 99889778
chr6 11439460 11439469 SOX9 JASPAR yes 70309692
chr6 11439460 11439469 SOX9 JASPAR yes 99889779
chr6 11439475 11439479 YY1 TRANSFAC yes 70309693
chr6 11439475 11439479 YY1 TRANSFAC yes 99889780
chr6 11439493 11439505 PROX1 JASPAR yes 70309694
chr6 11439493 11439505 PROX1 JASPAR yes 99889781
chr6 11439498 11439508 SMAD3 JASPAR yes 70309695
chr6 11439498 11439508 SMAD3 JASPAR yes 99889782
chr6 11439504 11439520 SOX8 JASPAR yes 70309696
chr6 11439504 11439520 SOX8 JASPAR yes 99889783
chr6 11439507 11439517 NFATC3 JASPAR yes 70309697
chr6 11439507 11439517 NFATC3 JASPAR yes 99889784
chr6 11439509 11439516 NFATC2 JASPAR yes 70309698
chr6 11439509 11439516 NFATC2 JASPAR yes 99889785
chr6 11439545 11439549 YY1 TRANSFAC yes 70309699
chr6 11439545 11439549 YY1 TRANSFAC yes 99889786
chr6 11439566 11439581 HNF1A JASPAR yes 70309700
chr6 11439566 11439581 HNF1A JASPAR yes 99889787
chr6 11439567 11439579 HNF1B JASPAR yes 70309701
chr6 11439567 11439579 HNF1B JASPAR yes 99889788
chr6 11439567 11439580 HNF1B JASPAR yes 70309702
chr6 11439567 11439580 HNF1B JASPAR yes 99889789
chr6 11439599 11439613 SPI1 JASPAR yes 70309703
chr6 11439599 11439613 SPIC JASPAR yes 70309704
chr6 11439599 11439613 SPI1 JASPAR yes 99889790
chr6 11439599 11439613 SPIC JASPAR yes 99889791
chr6 11439600 11439613 ELF1 JASPAR yes 70309705
chr6 11439600 11439613 ELF1 JASPAR yes 99889792
chr6 11439603 11439613 ETV6 JASPAR yes 70309706
chr6 11439603 11439613 ETV6 JASPAR yes 99889793
chr6 11439604 11439612 EHF JASPAR yes 70309707
chr6 11439604 11439612 EHF JASPAR yes 99889794
chr6 11439605 11439612 SPI1 JASPAR yes 70309708
chr6 11439605 11439612 SPI1 JASPAR yes 99889795
chr6 11439621 11439625 TEAD2 TRANSFAC yes 70309709
chr6 11439621 11439625 TEAD2 TRANSFAC yes 99889796
chr6 11439621 11439626 TBP TRANSFAC yes 70309710
chr6 11439621 11439626 TBP TRANSFAC yes 99889797
chr6 11439623 11439638 FOXA1 JASPAR yes 70309711
chr6 11439623 11439638 FOXA1 JASPAR yes 99889798
chr6 11439624 11439635 FOXB1 JASPAR yes 70309712
chr6 11439624 11439635 FOXB1 JASPAR yes 99889799
chr6 11439630 11439642 POU2F1 JASPAR yes 70309713
chr6 11439630 11439642 POU2F1 JASPAR yes 99889800
chr6 11439631 11439643 POU3F1 JASPAR yes 70309714
chr6 11439631 11439643 POU3F2 JASPAR yes 70309715
chr6 11439631 11439643 POU3F1 JASPAR yes 99889801
chr6 11439631 11439643 POU3F2 JASPAR yes 99889802
chr6 11439631 11439644 POU2F2 JASPAR yes 70309716
chr6 11439631 11439644 POU2F2 JASPAR yes 99889803
chr6 11439632 11439640 FOXL1 JASPAR yes 70309717
chr6 11439632 11439640 FOXL1 JASPAR yes 99889804
chr6 11439632 11439641 POU5F1B JASPAR yes 70309718
chr6 11439632 11439641 POU5F1B JASPAR yes 99889805
chr6 11439633 11439650 RARA JASPAR yes 70309719
chr6 11439633 11439650 RARA JASPAR yes 99889806
chr6 11439645 11439649 ESR1 TRANSFAC yes 70309720
chr6 11439645 11439649 ESR1 TRANSFAC yes 99889807
SNP sites on vista50830[chr6:11439294-11439659]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11439414 rs148515371 A G no 8831121
chr6 11439643 rs16871350 T A
POU2F2 POU3F1 POU3F2 RARA
8831122
Genes possibly regulated by vista50830[chr6:11439294-11439659]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 43287
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 0.78 0.88 6160 1721
Expression level of Genes
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miRNAs possibly regulated by vista50830[chr6:11439294-11439659]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results