EnhancerDB
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  3. vista50832[chr6:11460199-11460430]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50832[chr6:11460199-11460430]
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Tissue distribution of vista50832
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Transcription factor that possibly regulate vista50832[chr6:11460199-11460430]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11460216 11460486 RUNX3 UCSC Txn Factor no Conserved 108538428
chr6 11460217 11460223 TBP TRANSFAC yes 70309767
chr6 11460217 11460223 TBP TRANSFAC yes 99891226
chr6 11460232 11460237 MYB TRANSFAC yes 70309768
chr6 11460232 11460237 MYB TRANSFAC yes 99891227
chr6 11460238 11460259 IRF1 JASPAR yes 70309769
chr6 11460238 11460259 IRF1 JASPAR yes 99891228
chr6 11460241 11460255 IRF7 JASPAR yes 70309770
chr6 11460241 11460255 IRF8 JASPAR yes 70309771
chr6 11460241 11460255 IRF7 JASPAR yes 99891229
chr6 11460241 11460255 IRF8 JASPAR yes 99891230
chr6 11460242 11460256 SPIC JASPAR yes 70309772
chr6 11460242 11460256 SPIC JASPAR yes 99891231
chr6 11460242 11460257 PRDM1 JASPAR yes 70309773
chr6 11460242 11460257 PRDM1 JASPAR yes 99891232
chr6 11460268 11460289 ZNF263 JASPAR yes 70309774
chr6 11460268 11460289 ZNF263 JASPAR yes 99891233
chr6 11460269 11460279 ZNF740 JASPAR yes 70309775
chr6 11460269 11460279 ZNF740 JASPAR yes 99891234
chr6 11460272 11460290 RARA JASPAR yes 70309776
chr6 11460272 11460290 RARA JASPAR yes 99891235
chr6 11460273 11460294 IRF1 JASPAR yes 70309777
chr6 11460273 11460294 IRF1 JASPAR yes 99891236
chr6 11460277 11460292 PRDM1 JASPAR yes 70309778
chr6 11460277 11460292 STAT2 JASPAR yes 70309779
chr6 11460277 11460292 PRDM1 JASPAR yes 99891237
chr6 11460277 11460292 STAT2 JASPAR yes 99891238
chr6 11460280 11460285 ETS2 TRANSFAC yes 70309780
chr6 11460280 11460285 ETS2 TRANSFAC yes 99891239
chr6 11460292 11460305 SMAD2 JASPAR yes 70309781
chr6 11460292 11460305 SMAD2 JASPAR yes 99891240
chr6 11460295 11460307 ZBTB7B JASPAR yes 70309782
chr6 11460295 11460307 ZBTB7C JASPAR yes 70309783
chr6 11460295 11460307 ZBTB7B JASPAR yes 99891241
chr6 11460295 11460307 ZBTB7C JASPAR yes 99891242
chr6 11460306 11460324 NR3C1 JASPAR yes 70309784
chr6 11460306 11460324 NR3C1 JASPAR yes 99891243
chr6 11460307 11460328 IRF1 JASPAR yes 70309785
chr6 11460307 11460328 IRF1 JASPAR yes 99891244
chr6 11460309 11460324 PRDM1 JASPAR yes 70309786
chr6 11460309 11460324 STAT2 JASPAR yes 70309787
chr6 11460309 11460324 PRDM1 JASPAR yes 99891245
chr6 11460309 11460324 STAT2 JASPAR yes 99891246
chr6 11460316 11460329 ELF1 JASPAR yes 70309788
chr6 11460316 11460329 ELF1 JASPAR yes 99891247
chr6 11460327 11460339 IRF1 JASPAR yes 70309789
chr6 11460327 11460339 IRF1 JASPAR yes 99891248
chr6 11460332 11460336 YY1 TRANSFAC yes 70309790
chr6 11460332 11460336 YY1 TRANSFAC yes 99891249
chr6 11460335 11460348 SCRT2 JASPAR yes 70309791
chr6 11460335 11460348 SCRT2 JASPAR yes 99891250
chr6 11460339 11460350 ETV2 JASPAR yes 70309792
chr6 11460339 11460350 SPDEF JASPAR yes 70309793
chr6 11460339 11460350 ETV2 JASPAR yes 99891251
chr6 11460339 11460350 SPDEF JASPAR yes 99891252
chr6 11460340 11460350 ERF JASPAR yes 70309794
chr6 11460340 11460350 ERG JASPAR yes 70309795
chr6 11460340 11460350 ETS1 JASPAR yes 70309796
chr6 11460340 11460350 ERF JASPAR yes 99891253
chr6 11460340 11460350 ERG JASPAR yes 99891254
chr6 11460340 11460350 ETS1 JASPAR yes 99891255
chr6 11460340 11460351 FLI1 JASPAR yes 70309797
chr6 11460340 11460351 FLI1 JASPAR yes 99891256
chr6 11460341 11460348 PEA3 TRANSFAC yes 70309798
chr6 11460341 11460348 PEA3 TRANSFAC yes 99891257
chr6 11460386 11460402 RFX2 JASPAR yes 70309799
chr6 11460386 11460402 RFX3 JASPAR yes 70309800
chr6 11460386 11460402 RFX4 JASPAR yes 70309801
chr6 11460386 11460402 RFX2 JASPAR yes 99891258
chr6 11460386 11460402 RFX3 JASPAR yes 99891259
chr6 11460386 11460402 RFX4 JASPAR yes 99891260
chr6 11460394 11460405 NFIL3 JASPAR yes 70309802
chr6 11460394 11460405 NFIL3 JASPAR yes 99891261
chr6 11460408 11460423 HSF1 JASPAR yes 70309803
chr6 11460408 11460423 HSF1 JASPAR yes 99891262
chr6 11460418 11460437 REST JASPAR yes 70309804
chr6 11460418 11460437 REST JASPAR yes 99891263
chr6 11460428 11460441 NFKB1 JASPAR yes 70309805
chr6 11460428 11460441 NFKB1 JASPAR yes 99891264
SNP sites on vista50832[chr6:11460199-11460430]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11460261 rs77714845 G A
RUNX3
8831271
chr6 11460284 rs150784378 G T
ETS2 IRF1 PRDM1 RARA RUNX3 STAT2 ZNF263
8831272
chr6 11460336 rs186340602 T G
IRF1 RUNX3 SCRT2 YY1
8831273
Genes possibly regulated by vista50832[chr6:11460199-11460430]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 22382
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 0.78 0.88 6160 22492
Expression level of Genes
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miRNAs possibly regulated by vista50832[chr6:11460199-11460430]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results