EnhancerDB
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  3. vista50833[chr6:11460602-11460937]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50833[chr6:11460602-11460937]
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Tissue distribution of vista50833
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Transcription factor that possibly regulate vista50833[chr6:11460602-11460937]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11460593 11460602 NKX2-8 JASPAR yes 70309806
chr6 11460593 11460602 NKX2-8 JASPAR yes 99891287
chr6 11460593 11460603 NKX2-3 JASPAR yes 70309807
chr6 11460593 11460603 NKX2-3 JASPAR yes 99891288
chr6 11460619 11460633 ZIC1 JASPAR yes 70309808
chr6 11460619 11460633 ZIC1 JASPAR yes 99891289
chr6 11460626 11460642 ZNF143 JASPAR yes 70309809
chr6 11460626 11460642 ZNF143 JASPAR yes 99891290
chr6 11460636 11460642 ESR1 TRANSFAC yes 70309810
chr6 11460636 11460642 ESR1 TRANSFAC yes 99891291
chr6 11460638 11460642 ESR1 TRANSFAC yes 70309811
chr6 11460638 11460642 ESR1 TRANSFAC yes 99891292
chr6 11460655 11460661 PEA3 TRANSFAC yes 70309812
chr6 11460655 11460661 PEA3 TRANSFAC yes 99891293
chr6 11460656 11460664 FEV JASPAR yes 70309813
chr6 11460656 11460664 FEV JASPAR yes 99891294
chr6 11460677 11460689 TAL1 JASPAR yes 70309814
chr6 11460677 11460689 TAL1 JASPAR yes 99891295
chr6 11460691 11460703 PROX1 JASPAR yes 70309815
chr6 11460691 11460703 PROX1 JASPAR yes 99891296
chr6 11460694 11460699 H4TF1 TRANSFAC yes 70309816
chr6 11460694 11460699 H4TF1 TRANSFAC yes 99891297
chr6 11460694 11460705 CEBPB JASPAR yes 70309817
chr6 11460694 11460705 CEBPB JASPAR yes 99891298
chr6 11460707 11460713 SOX10 JASPAR yes 70309818
chr6 11460707 11460713 SOX10 JASPAR yes 99891299
chr6 11460730 11460744 GATA2 JASPAR yes 70309819
chr6 11460730 11460744 GATA2 JASPAR yes 99891300
chr6 11460734 11460742 GATA3 JASPAR yes 70309820
chr6 11460734 11460742 GATA5 JASPAR yes 70309821
chr6 11460734 11460742 GATA3 JASPAR yes 99891301
chr6 11460734 11460742 GATA5 JASPAR yes 99891302
chr6 11460768 11460775 SPI1 JASPAR yes 70309822
chr6 11460768 11460775 SPI1 JASPAR yes 99891303
chr6 11460768 11460776 EHF JASPAR yes 70309823
chr6 11460768 11460776 EHF JASPAR yes 99891304
chr6 11460786 11460801 NR2C2 JASPAR yes 70309824
chr6 11460786 11460801 NR2C2 JASPAR yes 99891305
chr6 11460790 11460809 CTCF JASPAR yes 70309825
chr6 11460790 11460809 CTCF JASPAR yes 99891306
chr6 11460805 11460826 MAFG JASPAR yes 70309826
chr6 11460805 11460826 MAFG JASPAR yes 99891307
chr6 11460822 11460833 FOXH1 JASPAR yes 70309827
chr6 11460822 11460833 FOXH1 JASPAR yes 99891308
chr6 11460866 11460871 TFAP2A TRANSFAC yes 70309828
chr6 11460866 11460871 TFAP2A TRANSFAC yes 99891309
chr6 11460866 11460872 MZF1 JASPAR yes 70309829
chr6 11460866 11460872 MZF1 JASPAR yes 99891310
chr6 11460867 11460885 NR3C1 JASPAR yes 70309830
chr6 11460867 11460885 NR3C1 JASPAR yes 99891311
chr6 11460872 11460880 HOXA5 JASPAR yes 70309831
chr6 11460872 11460880 HOXA5 JASPAR yes 99891312
chr6 11460882 11460886 YY1 TRANSFAC yes 70309832
chr6 11460882 11460886 YY1 TRANSFAC yes 99891313
chr6 11460894 11460905 CDX2 JASPAR yes 70309833
chr6 11460894 11460905 CDX2 JASPAR yes 99891314
chr6 11460895 11460906 HOXA10 JASPAR yes 70309834
chr6 11460895 11460906 HOXC11 JASPAR yes 70309835
chr6 11460895 11460906 HOXC12 JASPAR yes 70309836
chr6 11460895 11460906 HOXC13 JASPAR yes 70309837
chr6 11460895 11460906 HOXD12 JASPAR yes 70309838
chr6 11460895 11460906 HOXA10 JASPAR yes 99891315
chr6 11460895 11460906 HOXC11 JASPAR yes 99891316
chr6 11460895 11460906 HOXC12 JASPAR yes 99891317
chr6 11460895 11460906 HOXC13 JASPAR yes 99891318
chr6 11460895 11460906 HOXD12 JASPAR yes 99891319
chr6 11460896 11460905 CDX1 JASPAR yes 70309839
chr6 11460896 11460905 CDX1 JASPAR yes 99891320
chr6 11460896 11460906 HOXA13 JASPAR yes 70309840
chr6 11460896 11460906 HOXC10 JASPAR yes 70309841
chr6 11460896 11460906 HOXD11 JASPAR yes 70309842
chr6 11460896 11460906 HOXD13 JASPAR yes 70309843
chr6 11460896 11460906 HOXA13 JASPAR yes 99891321
chr6 11460896 11460906 HOXC10 JASPAR yes 99891322
chr6 11460896 11460906 HOXD11 JASPAR yes 99891323
chr6 11460896 11460906 HOXD13 JASPAR yes 99891324
chr6 11460899 11460915 POU4F2 JASPAR yes 70309844
chr6 11460899 11460915 POU4F3 JASPAR yes 70309845
chr6 11460899 11460915 POU4F2 JASPAR yes 99891325
chr6 11460899 11460915 POU4F3 JASPAR yes 99891326
chr6 11460916 11460920 YY1 TRANSFAC yes 70309846
chr6 11460916 11460920 YY1 TRANSFAC yes 99891327
chr6 11460920 11460935 HNF4A JASPAR yes 70309847
chr6 11460920 11460935 HNF4A JASPAR yes 99891328
chr6 11460924 11460930 SOX10 JASPAR yes 70309848
chr6 11460924 11460930 SOX10 JASPAR yes 99891329
chr6 11460936 11460945 CDX1 JASPAR yes 70309849
chr6 11460936 11460945 CDX1 JASPAR yes 99891330
chr6 11460936 11460947 CDX2 JASPAR yes 70309850
chr6 11460936 11460947 CDX2 JASPAR yes 99891331
SNP sites on vista50833[chr6:11460602-11460937]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11460765 rs4713525 C T no 8831278
chr6 11460777 rs577553283 A G no 8831279
chr6 11460828 rs181503518 A C
FOXH1
8831280
Genes possibly regulated by vista50833[chr6:11460602-11460937]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 21979
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 0.78 0.88 6160 22999
Expression level of Genes
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miRNAs possibly regulated by vista50833[chr6:11460602-11460937]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results