EnhancerDB
  1. Home
  2. Enhancers
  3. vista50839[chr6:11539796-11540182]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50839[chr6:11539796-11540182]
Back to top
Tissue distribution of vista50839
Back to top
Transcription factor that possibly regulate vista50839[chr6:11539796-11540182]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11539808 11539821 HSF1 JASPAR yes 70310077
chr6 11539808 11539821 HSF4 JASPAR yes 70310078
chr6 11539818 11539829 CEBPB JASPAR yes 70310079
chr6 11539818 11539831 ATF4 JASPAR yes 70310080
chr6 11539830 11539834 NFE TRANSFAC yes 70310081
chr6 11539831 11539836 GATA2 JASPAR yes 70310082
chr6 11539842 11539857 RUNX2 JASPAR yes 70310083
chr6 11539845 11539856 RUNX1 JASPAR yes 70310084
chr6 11539847 11539856 RUNX2 JASPAR yes 70310085
chr6 11539854 11539858 YY1 TRANSFAC yes 70310086
chr6 11539858 11539861 MYB TRANSFAC yes 70310087
chr6 11539897 11539902 ETS2 TRANSFAC yes 70310088
chr6 11539904 11539915 FOXC1 JASPAR yes 70310089
chr6 11539906 11539915 SRY JASPAR yes 70310090
chr6 11539911 11539915 TEAD2 TRANSFAC yes 70310091
chr6 11539911 11539924 HSF2 JASPAR yes 70310092
chr6 11539915 11539926 STAT3 JASPAR yes 70310093
chr6 11539919 11539926 NFATC2 JASPAR yes 70310094
chr6 11539948 11539959 FOSL2 JASPAR yes 70310095
chr6 11539949 11539960 FOS JASPAR yes 70310096
chr6 11539950 11539963 DUXA JASPAR yes 70310097
chr6 11539951 11539962 DUX4 JASPAR yes 70310098
chr6 11539956 11539961 MYC TRANSFAC yes 70310099
chr6 11539979 11539987 GATA3 JASPAR yes 70310100
chr6 11539986 11539993 NKX3-1 JASPAR yes 70310101
chr6 11540005 11540009 YY1 TRANSFAC yes 70310102
chr6 11540009 11540014 GATA2 JASPAR yes 70310103
chr6 11540010 11540016 ZNF354C JASPAR yes 70310104
chr6 11540023 11540027 YY1 TRANSFAC yes 70310105
chr6 11540041 11540047 TCF4 TRANSFAC yes 70310106
chr6 11540042 11540051 SRY JASPAR yes 70310107
chr6 11540048 11540069 IRF1 JASPAR yes 70310108
chr6 11540070 11540090 TBX19 JASPAR yes 70310109
chr6 11540072 11540075 MYB TRANSFAC yes 70310110
chr6 11540073 11540083 NEUROG2 JASPAR yes 70310111
chr6 11540079 11540083 YY1 TRANSFAC yes 70310112
chr6 11540086 11540106 TP53 JASPAR yes 70310113
chr6 11540124 11540139 RUNX2 JASPAR yes 70310114
chr6 11540134 11540145 FOXA1 JASPAR yes 70310115
chr6 11540134 11540149 FOXA1 JASPAR yes 70310116
chr6 11540135 11540146 FOXB1 JASPAR yes 70310117
chr6 11540135 11540146 FOXC1 JASPAR yes 70310118
chr6 11540135 11540147 FOXC2 JASPAR yes 70310119
chr6 11540145 11540156 CDX2 JASPAR yes 70310120
chr6 11540146 11540157 HOXA10 JASPAR yes 70310121
chr6 11540147 11540156 CDX1 JASPAR yes 70310122
chr6 11540171 11540177 TCF4 TRANSFAC yes 70310123
chr6 11540172 11540181 SRY JASPAR yes 70310124
chr6 11540174 11540182 FOXO3 JASPAR yes 70310125
SNP sites on vista50839[chr6:11539796-11540182]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11539835 rs77500796 C T
GATA2
8831716
chr6 11539894 rs75802468 C T no 8831717
Genes possibly regulated by vista50839[chr6:11539796-11540182]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 0.78 0.88 6160 98142
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50839[chr6:11539796-11540182]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results