EnhancerDB
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  3. vista50842[chr6:11592688-11592910]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50842[chr6:11592688-11592910]
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Tissue distribution of vista50842
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Transcription factor that possibly regulate vista50842[chr6:11592688-11592910]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11592679 11592691 FOXC2 JASPAR yes 70310180
chr6 11592679 11592691 FOXC2 JASPAR yes 99897758
chr6 11592680 11592691 FOXB1 JASPAR yes 70310181
chr6 11592680 11592691 FOXC1 JASPAR yes 70310182
chr6 11592680 11592691 FOXB1 JASPAR yes 99897759
chr6 11592680 11592691 FOXC1 JASPAR yes 99897760
chr6 11592687 11592701 RORA JASPAR yes 70310183
chr6 11592687 11592701 RORA JASPAR yes 99897762
chr6 11592694 11592699 H4TF1 TRANSFAC yes 70310184
chr6 11592694 11592699 H4TF1 TRANSFAC yes 99897763
chr6 11592707 11592720 SMAD2 JASPAR yes 70310185
chr6 11592707 11592720 SMAD2 JASPAR yes 99897764
chr6 11592707 11592722 RFX5 JASPAR yes 70310186
chr6 11592707 11592722 RFX5 JASPAR yes 99897765
chr6 11592710 11592725 TFAP2A JASPAR yes 70310187
chr6 11592710 11592725 TFAP2C JASPAR yes 70310188
chr6 11592710 11592725 TFAP2A JASPAR yes 99897766
chr6 11592710 11592725 TFAP2C JASPAR yes 99897767
chr6 11592711 11592726 HNF4A JASPAR yes 70310189
chr6 11592711 11592726 HNF4A JASPAR yes 99897768
chr6 11592712 11592727 HNF4G JASPAR yes 70310190
chr6 11592712 11592727 HNF4G JASPAR yes 99897769
chr6 11592740 11592755 JUND JASPAR yes 70310191
chr6 11592740 11592755 JUND JASPAR yes 99897770
chr6 11592741 11592754 JUN JASPAR yes 70310192
chr6 11592741 11592754 JUN JASPAR yes 99897771
chr6 11592742 11592756 ATF7 JASPAR yes 70310193
chr6 11592742 11592756 BATF3 JASPAR yes 70310194
chr6 11592742 11592756 ATF7 JASPAR yes 99897772
chr6 11592742 11592756 BATF3 JASPAR yes 99897773
chr6 11592743 11592755 JDP2 JASPAR yes 70310195
chr6 11592743 11592755 JDP2 JASPAR yes 99897774
chr6 11592743 11592758 JUND JASPAR yes 70310196
chr6 11592743 11592758 JUND JASPAR yes 99897775
chr6 11592756 11592762 NFIC JASPAR yes 70310197
chr6 11592756 11592762 NFIC JASPAR yes 99897776
chr6 11592762 11592767 H4TF1 TRANSFAC yes 70310198
chr6 11592762 11592767 H4TF1 TRANSFAC yes 99897777
chr6 11592767 11592771 NFE TRANSFAC yes 70310199
chr6 11592767 11592771 NFE TRANSFAC yes 99897778
chr6 11592768 11592783 HSF1 JASPAR yes 70310200
chr6 11592768 11592783 HSF1 JASPAR yes 99897779
chr6 11592772 11592782 RELA JASPAR yes 70310201
chr6 11592772 11592782 REL JASPAR yes 70310202
chr6 11592772 11592782 RELA JASPAR yes 99897780
chr6 11592772 11592782 REL JASPAR yes 99897781
chr6 11592772 11592783 NFKB1 JASPAR yes 70310203
chr6 11592772 11592783 NFKB1 JASPAR yes 99897782
chr6 11592773 11592782 NF-kappaB TRANSFAC yes 70310204
chr6 11592773 11592782 NF-kappaB TRANSFAC yes 99897783
chr6 11592776 11592784 FEV JASPAR yes 70310205
chr6 11592776 11592784 FEV JASPAR yes 99897784
chr6 11592782 11592785 MYB TRANSFAC yes 70310206
chr6 11592782 11592785 MYB TRANSFAC yes 99897785
chr6 11592790 11592804 PLAG1 JASPAR yes 70310207
chr6 11592790 11592804 PLAG1 JASPAR yes 99897786
chr6 11592799 11592810 NFKB1 JASPAR yes 70310208
chr6 11592799 11592810 NFKB1 JASPAR yes 99897787
chr6 11592800 11592810 NFKB1 JASPAR yes 70310209
chr6 11592800 11592810 RELA JASPAR yes 70310210
chr6 11592800 11592810 NFKB1 JASPAR yes 99897788
chr6 11592800 11592810 RELA JASPAR yes 99897789
chr6 11592800 11592811 NFKB1 JASPAR yes 70310211
chr6 11592800 11592811 NFKB1 JASPAR yes 99897790
chr6 11592800 11592818 ESR1 JASPAR yes 70310212
chr6 11592800 11592818 ESR1 JASPAR yes 99897791
chr6 11592823 11592836 SMAD2 JASPAR yes 70310213
chr6 11592823 11592836 SMAD2 JASPAR yes 99897792
chr6 11592868 11592879 GCM1 JASPAR yes 70310214
chr6 11592868 11592879 GCM1 JASPAR yes 99897793
chr6 11592869 11592879 GCM2 JASPAR yes 70310215
chr6 11592869 11592879 GCM2 JASPAR yes 99897794
chr6 11592877 11592881 TEAD2 TRANSFAC yes 70310216
chr6 11592877 11592881 TEAD2 TRANSFAC yes 99897795
chr6 11592877 11592882 TBP TRANSFAC yes 70310217
chr6 11592877 11592882 TBP TRANSFAC yes 99897796
chr6 11592877 11592883 TFIID TRANSFAC yes 70310218
chr6 11592877 11592883 TFIID TRANSFAC yes 99897797
chr6 11592898 11592910 PKNOX1 JASPAR yes 70310219
chr6 11592898 11592910 PKNOX2 JASPAR yes 70310220
chr6 11592898 11592910 TGIF1 JASPAR yes 70310221
chr6 11592898 11592910 TGIF2 JASPAR yes 70310222
chr6 11592898 11592910 PKNOX1 JASPAR yes 99897798
chr6 11592898 11592910 PKNOX2 JASPAR yes 99897799
chr6 11592898 11592910 TGIF1 JASPAR yes 99897800
chr6 11592898 11592910 TGIF2 JASPAR yes 99897801
SNP sites on vista50842[chr6:11592688-11592910]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11592837 rs192014819 G A,C,T no 8831938
chr6 11592880 rs139043958 T C
TBP TEAD2 TFIID
8831939
chr6 11592887 rs398000467 CA C no 8831940
chr6 11592887 rs5874327 CA C no 8831941
Genes possibly regulated by vista50842[chr6:11592688-11592910]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 0.78 0.88 6160 45250
Expression level of Genes
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miRNAs possibly regulated by vista50842[chr6:11592688-11592910]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results