EnhancerDB
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  3. vista50843[chr6:11605309-11605625]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50843[chr6:11605309-11605625]
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Tissue distribution of vista50843
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Transcription factor that possibly regulate vista50843[chr6:11605309-11605625]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11605302 11605317 MEF2C JASPAR yes 70310223
chr6 11605302 11605317 MEF2C JASPAR yes 99899826
chr6 11605320 11605334 POU4F1 JASPAR yes 70310224
chr6 11605320 11605334 POU4F1 JASPAR yes 99899827
chr6 11605321 11605333 HNF1B JASPAR yes 70310225
chr6 11605321 11605333 HNF1B JASPAR yes 99899828
chr6 11605337 11605343 LEF1 TRANSFAC yes 70310226
chr6 11605337 11605343 SOX10 JASPAR yes 70310227
chr6 11605337 11605343 LEF1 TRANSFAC yes 99899829
chr6 11605337 11605343 SOX10 JASPAR yes 99899830
chr6 11605355 11605370 FOXP1 JASPAR yes 70310228
chr6 11605355 11605370 FOXP1 JASPAR yes 99899831
chr6 11605358 11605369 FOXP2 JASPAR yes 70310229
chr6 11605358 11605369 FOXP2 JASPAR yes 99899832
chr6 11605371 11605377 SOX10 JASPAR yes 70310230
chr6 11605371 11605377 SOX10 JASPAR yes 99899833
chr6 11605384 11605405 REST JASPAR yes 70310231
chr6 11605384 11605405 REST JASPAR yes 99899834
chr6 11605385 11605404 REST JASPAR yes 70310232
chr6 11605385 11605404 REST JASPAR yes 99899835
chr6 11605387 11605402 RUNX2 JASPAR yes 70310233
chr6 11605387 11605402 RUNX2 JASPAR yes 99899836
chr6 11605438 11605442 NFE TRANSFAC yes 70310234
chr6 11605438 11605442 NFE TRANSFAC yes 99899837
chr6 11605439 11605453 EBF1 JASPAR yes 70310235
chr6 11605439 11605453 EBF1 JASPAR yes 99899838
chr6 11605440 11605451 EBF1 JASPAR yes 70310236
chr6 11605440 11605451 EBF1 JASPAR yes 99899839
chr6 11605441 11605447 MZF1 JASPAR yes 70310237
chr6 11605441 11605447 MZF1 JASPAR yes 99899840
chr6 11605442 11605456 PLAG1 JASPAR yes 70310238
chr6 11605442 11605456 PLAG1 JASPAR yes 99899841
chr6 11605475 11605487 IRF1 JASPAR yes 70310239
chr6 11605475 11605487 IRF1 JASPAR yes 99899842
chr6 11605480 11605484 YY1 TRANSFAC yes 70310240
chr6 11605480 11605484 YY1 TRANSFAC yes 99899843
chr6 11605530 11605541 GCM1 JASPAR yes 70310241
chr6 11605530 11605541 GCM1 JASPAR yes 99899844
chr6 11605536 11605541 SP1 TRANSFAC yes 70310242
chr6 11605536 11605541 SP1 TRANSFAC yes 99899845
chr6 11605562 11605567 ETS2 TRANSFAC yes 70310243
chr6 11605562 11605567 ETS2 TRANSFAC yes 99899846
chr6 11605563 11605578 FOXP1 JASPAR yes 70310244
chr6 11605563 11605578 FOXP1 JASPAR yes 99899847
chr6 11605566 11605577 FOXP2 JASPAR yes 70310245
chr6 11605566 11605577 FOXP2 JASPAR yes 99899848
chr6 11605576 11605587 CEBPB JASPAR yes 70310246
chr6 11605576 11605587 CEBPB JASPAR yes 99899849
chr6 11605576 11605589 ATF4 JASPAR yes 70310247
chr6 11605576 11605589 ATF4 JASPAR yes 99899850
chr6 11605577 11605588 CEBPA JASPAR yes 70310248
chr6 11605577 11605588 CEBPA JASPAR yes 99899851
chr6 11605590 11605594 YY1 TRANSFAC yes 70310249
chr6 11605590 11605594 YY1 TRANSFAC yes 99899852
chr6 11605592 11605598 TCF4 TRANSFAC yes 70310250
chr6 11605592 11605598 TCF4 TRANSFAC yes 99899853
chr6 11605597 11605618 ZNF263 JASPAR yes 70310251
chr6 11605597 11605618 ZNF263 JASPAR yes 99899854
chr6 11605604 11605607 MYB TRANSFAC yes 70310252
chr6 11605604 11605607 MYB TRANSFAC yes 99899855
chr6 11605619 11605625 MZF1 JASPAR yes 70310253
chr6 11605619 11605625 MZF1 JASPAR yes 99899856
SNP sites on vista50843[chr6:11605309-11605625]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11605377 rs75590295 G A
SOX10
8832124
chr6 11605475 rs190821043 G A
IRF1
8832125
chr6 11605559 rs140628134 G A no 8832126
Genes possibly regulated by vista50843[chr6:11605309-11605625]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11537938 11583757 + TMEM170B ENSG00000205269.4 11537938 0.78 0.88 6160 32629
Expression level of Genes
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miRNAs possibly regulated by vista50843[chr6:11605309-11605625]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results