EnhancerDB
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  3. vista50857[chr6:11729368-11729745]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50857[chr6:11729368-11729745]
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Tissue distribution of vista50857
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Transcription factor that possibly regulate vista50857[chr6:11729368-11729745]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11729369 11729383 FOXF2 JASPAR yes 70310812
chr6 11729369 11729383 FOXF2 JASPAR yes 99910848
chr6 11729369 11729384 FOXP1 JASPAR yes 70310813
chr6 11729369 11729384 MYBL2 JASPAR yes 70310814
chr6 11729369 11729384 FOXP1 JASPAR yes 99910849
chr6 11729369 11729384 MYBL2 JASPAR yes 99910850
chr6 11729370 11729384 GATA2 JASPAR yes 70310815
chr6 11729370 11729384 GATA2 JASPAR yes 99910851
chr6 11729372 11729380 GATA3 JASPAR yes 70310816
chr6 11729372 11729380 GATA3 JASPAR yes 99910852
chr6 11729372 11729383 FOXP2 JASPAR yes 70310817
chr6 11729372 11729383 FOXP2 JASPAR yes 99910853
chr6 11729378 11729392 GATA2 JASPAR yes 70310818
chr6 11729378 11729392 GATA2 JASPAR yes 99910854
chr6 11729380 11729388 GATA5 JASPAR yes 70310819
chr6 11729380 11729388 GATA5 JASPAR yes 99910855
chr6 11729383 11729386 MYB TRANSFAC yes 70310820
chr6 11729383 11729386 MYB TRANSFAC yes 99910856
chr6 11729388 11729403 RUNX2 JASPAR yes 70310821
chr6 11729388 11729403 RUNX2 JASPAR yes 99910857
chr6 11729395 11729410 HNF4A JASPAR yes 70310822
chr6 11729395 11729410 HNF4A JASPAR yes 99910858
chr6 11729404 11729408 LFA1 TRANSFAC yes 70310823
chr6 11729404 11729408 LFA1 TRANSFAC yes 99910859
chr6 11729409 11729413 TEAD2 TRANSFAC yes 70310824
chr6 11729409 11729413 TEAD2 TRANSFAC yes 99910860
chr6 11729430 11729433 MYB TRANSFAC yes 70310825
chr6 11729430 11729433 MYB TRANSFAC yes 99910861
chr6 11729439 11729443 ESR1 TRANSFAC yes 70310826
chr6 11729439 11729443 ESR1 TRANSFAC yes 99910862
chr6 11729454 11729465 EBF1 JASPAR yes 70310827
chr6 11729454 11729465 EBF1 JASPAR yes 99910863
chr6 11729465 11729486 IRF1 JASPAR yes 70310828
chr6 11729465 11729486 IRF1 JASPAR yes 99910864
chr6 11729467 11729482 IRF9 JASPAR yes 70310829
chr6 11729467 11729482 IRF9 JASPAR yes 99910865
chr6 11729569 11729580 DUX4 JASPAR yes 70310830
chr6 11729569 11729580 DUX4 JASPAR yes 99910866
chr6 11729583 11729587 YY1 TRANSFAC yes 70310831
chr6 11729583 11729587 YY1 TRANSFAC yes 99910867
chr6 11729587 11729597 MSC JASPAR yes 70310832
chr6 11729587 11729597 MSC JASPAR yes 99910868
chr6 11729593 11729604 CEBPB JASPAR yes 70310833
chr6 11729593 11729604 CEBPB JASPAR yes 99910869
chr6 11729594 11729605 CEBPA JASPAR yes 70310834
chr6 11729594 11729605 CEBPA JASPAR yes 99910870
chr6 11729603 11729609 SP1 TRANSFAC yes 70310835
chr6 11729603 11729609 SP1 TRANSFAC yes 99910871
chr6 11729607 11729621 PLAG1 JASPAR yes 70310836
chr6 11729607 11729621 PLAG1 JASPAR yes 99910872
chr6 11729616 11729628 INSM1 JASPAR yes 70310837
chr6 11729616 11729628 INSM1 JASPAR yes 99910873
chr6 11729640 11729655 TFAP2C JASPAR yes 70310838
chr6 11729640 11729655 TFAP2C JASPAR yes 99910874
chr6 11729642 11729655 TFAP2A JASPAR yes 70310839
chr6 11729642 11729655 TFAP2B JASPAR yes 70310840
chr6 11729642 11729655 TFAP2C JASPAR yes 70310841
chr6 11729642 11729655 TFAP2A JASPAR yes 99910875
chr6 11729642 11729655 TFAP2B JASPAR yes 99910876
chr6 11729642 11729655 TFAP2C JASPAR yes 99910877
chr6 11729665 11729668 MYB TRANSFAC yes 70310842
chr6 11729665 11729668 MYB TRANSFAC yes 99910878
chr6 11729665 11729676 ELK4 JASPAR yes 70310843
chr6 11729665 11729676 FLI1 JASPAR yes 70310844
chr6 11729665 11729676 ELK4 JASPAR yes 99910879
chr6 11729665 11729676 FLI1 JASPAR yes 99910880
chr6 11729666 11729679 ELF1 JASPAR yes 70310845
chr6 11729666 11729679 ELF1 JASPAR yes 99910881
chr6 11729667 11729674 SPI1 JASPAR yes 70310846
chr6 11729667 11729674 SPI1 JASPAR yes 99910882
chr6 11729667 11729675 EHF JASPAR yes 70310847
chr6 11729667 11729675 FEV JASPAR yes 70310848
chr6 11729667 11729675 EHF JASPAR yes 99910883
chr6 11729667 11729675 FEV JASPAR yes 99910884
chr6 11729694 11729699 ETS2 TRANSFAC yes 70310849
chr6 11729694 11729699 ETS2 TRANSFAC yes 99910885
chr6 11729699 11729720 ZNF263 JASPAR yes 70310850
chr6 11729699 11729720 ZNF263 JASPAR yes 99910886
chr6 11729702 11729723 ZNF263 JASPAR yes 70310851
chr6 11729702 11729723 ZNF263 JASPAR yes 99910887
chr6 11729705 11729711 TCF4 TRANSFAC yes 70310852
chr6 11729705 11729711 TCF4 TRANSFAC yes 99910888
chr6 11729712 11729733 ZNF263 JASPAR yes 70310853
chr6 11729712 11729733 ZNF263 JASPAR yes 99910889
chr6 11729713 11729723 SP1 JASPAR yes 70310854
chr6 11729713 11729723 SP1 JASPAR yes 99910890
chr6 11729714 11729733 CTCF JASPAR yes 70310855
chr6 11729714 11729733 CTCF JASPAR yes 99910891
chr6 11729717 11729727 MZF1 JASPAR yes 70310856
chr6 11729717 11729727 MZF1 JASPAR yes 99910892
chr6 11729720 11729726 SP1 TRANSFAC yes 70310857
chr6 11729720 11729726 SP1 TRANSFAC yes 99910893
chr6 11729726 11729730 NFE TRANSFAC yes 70310858
chr6 11729726 11729730 NFE TRANSFAC yes 99910894
chr6 11729736 11729743 CEBPA TRANSFAC yes 70310859
chr6 11729736 11729743 CEBPA TRANSFAC yes 99910895
chr6 11729741 11729751 REL JASPAR yes 70310860
chr6 11729741 11729751 REL JASPAR yes 99910896
chr6 11729741 11729752 NFKB1 JASPAR yes 70310861
chr6 11729741 11729752 NFKB1 JASPAR yes 99910897
SNP sites on vista50857[chr6:11729368-11729745]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11729388 rs554060108 G A
GATA2 GATA5 RUNX2
8833206
chr6 11729417 rs17480539 C T no 8833207
chr6 11729440 rs210896 G T
ESR1
8833208
chr6 11729460 rs4713834 G C
EBF1
8833209
chr6 11729485 rs12198491 C G,T
IRF1
8833210
chr6 11729505 rs541700924 G GATT no 8833211
chr6 11729619 rs79788995 C T
INSM1 PLAG1
8833212
chr6 11729723 rs2294429 C G,T
CTCF MZF1 SP1 ZNF263
8833213
chr6 11729724 rs553673047 C G
CTCF MZF1 SP1 ZNF263
8833214
Genes possibly regulated by vista50857[chr6:11729368-11729745]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11712287 11807279 - ADTRP ENSG00000111863.8 11807279 0.89 0.99 6161 22466
Expression level of Genes
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miRNAs possibly regulated by vista50857[chr6:11729368-11729745]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results