EnhancerDB
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  3. vista50861[chr6:11733258-11733396]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50861[chr6:11733258-11733396]
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Tissue distribution of vista50861
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Transcription factor that possibly regulate vista50861[chr6:11733258-11733396]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11733256 11733266 SP1 JASPAR yes 70311105
chr6 11733256 11733266 SP1 JASPAR yes 99911455
chr6 11733267 11733278 USF1 JASPAR yes 70311106
chr6 11733267 11733278 USF1 JASPAR yes 99911456
chr6 11733280 11733284 LFA1 TRANSFAC yes 70311107
chr6 11733280 11733284 LFA1 TRANSFAC yes 99911457
chr6 11733310 11733320 NFATC3 JASPAR yes 70311108
chr6 11733310 11733320 NFATC3 JASPAR yes 99911458
chr6 11733311 11733318 NFATC2 JASPAR yes 70311109
chr6 11733311 11733318 NFATC2 JASPAR yes 99911459
chr6 11733315 11733319 H1TF2 TRANSFAC yes 70311110
chr6 11733315 11733319 NFE TRANSFAC yes 70311111
chr6 11733315 11733319 SRF TRANSFAC yes 70311112
chr6 11733315 11733319 H1TF2 TRANSFAC yes 99911460
chr6 11733315 11733319 NFE TRANSFAC yes 99911461
chr6 11733315 11733319 SRF TRANSFAC yes 99911462
chr6 11733315 11733336 MAFG JASPAR yes 70311113
chr6 11733315 11733336 MAFG JASPAR yes 99911463
chr6 11733319 11733330 NFE2L2 JASPAR yes 70311114
chr6 11733319 11733330 NFE2L2 JASPAR yes 99911464
chr6 11733320 11733338 MAFF JASPAR yes 70311115
chr6 11733320 11733338 MAFF JASPAR yes 99911465
chr6 11733338 11733352 ZIC1 JASPAR yes 70311116
chr6 11733338 11733352 ZIC1 JASPAR yes 99911466
chr6 11733338 11733353 ZIC3 JASPAR yes 70311117
chr6 11733338 11733353 ZIC4 JASPAR yes 70311118
chr6 11733338 11733353 ZIC3 JASPAR yes 99911467
chr6 11733338 11733353 ZIC4 JASPAR yes 99911468
chr6 11733344 11733353 SOX9 JASPAR yes 70311119
chr6 11733344 11733353 SOX9 JASPAR yes 99911469
chr6 11733346 11733355 SRY JASPAR yes 70311120
chr6 11733346 11733355 SRY JASPAR yes 99911470
chr6 11733347 11733360 EOMES JASPAR yes 70311121
chr6 11733347 11733360 EOMES JASPAR yes 99911471
chr6 11733350 11733360 TBX21 JASPAR yes 70311122
chr6 11733350 11733360 TBX21 JASPAR yes 99911472
chr6 11733363 11733373 HOXB13 JASPAR yes 70311123
chr6 11733363 11733373 HOXB13 JASPAR yes 99911473
chr6 11733364 11733379 MEF2C JASPAR yes 70311124
chr6 11733364 11733379 MEF2C JASPAR yes 99911474
chr6 11733367 11733371 YY1 TRANSFAC yes 70311125
chr6 11733367 11733371 YY1 TRANSFAC yes 99911475
chr6 11733371 11733382 FOXH1 JASPAR yes 70311126
chr6 11733371 11733382 FOXH1 JASPAR yes 99911476
chr6 11733372 11733378 ZNF354C JASPAR yes 70311127
chr6 11733372 11733378 ZNF354C JASPAR yes 99911477
chr6 11733378 11733390 PKNOX2 JASPAR yes 70311128
chr6 11733378 11733390 PKNOX2 JASPAR yes 99911478
chr6 11733394 11733399 MYC TRANSFAC yes 70311129
chr6 11733394 11733399 MYC TRANSFAC yes 99911479
SNP sites on vista50861[chr6:11733258-11733396]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11733260 rs141241629 C T
SP1
8833265
chr6 11733281 rs188225280 G A
LFA1
8833266
Genes possibly regulated by vista50861[chr6:11733258-11733396]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11712287 11807279 - ADTRP ENSG00000111863.8 11807279 0.89 0.99 6161 26117
Expression level of Genes
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miRNAs possibly regulated by vista50861[chr6:11733258-11733396]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results