EnhancerDB
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  3. vista50871[chr6:11830397-11830664]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50871[chr6:11830397-11830664]
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Tissue distribution of vista50871
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Transcription factor that possibly regulate vista50871[chr6:11830397-11830664]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11830410 11830423 SCRT2 JASPAR yes 70311649
chr6 11830410 11830423 SCRT2 JASPAR yes 99919860
chr6 11830410 11830425 SCRT1 JASPAR yes 70311650
chr6 11830410 11830425 SCRT1 JASPAR yes 99919861
chr6 11830426 11830440 POU4F1 JASPAR yes 70311651
chr6 11830426 11830440 POU4F1 JASPAR yes 99919862
chr6 11830426 11830442 POU4F2 JASPAR yes 70311652
chr6 11830426 11830442 POU4F3 JASPAR yes 70311653
chr6 11830426 11830442 POU4F2 JASPAR yes 99919863
chr6 11830426 11830442 POU4F3 JASPAR yes 99919864
chr6 11830429 11830439 GSX2 JASPAR yes 70311654
chr6 11830429 11830439 HOXB2 JASPAR yes 70311655
chr6 11830429 11830439 HOXB3 JASPAR yes 70311656
chr6 11830429 11830439 MNX1 JASPAR yes 70311657
chr6 11830429 11830439 POU6F1 JASPAR yes 70311658
chr6 11830429 11830439 GSX2 JASPAR yes 99919865
chr6 11830429 11830439 HOXB2 JASPAR yes 99919866
chr6 11830429 11830439 HOXB3 JASPAR yes 99919867
chr6 11830429 11830439 MNX1 JASPAR yes 99919868
chr6 11830429 11830439 POU6F1 JASPAR yes 99919869
chr6 11830430 11830438 LMX1A JASPAR yes 70311659
chr6 11830430 11830438 LMX1B JASPAR yes 70311660
chr6 11830430 11830438 NKX6-1 JASPAR yes 70311661
chr6 11830430 11830438 NKX6-2 JASPAR yes 70311662
chr6 11830430 11830438 VAX1 JASPAR yes 70311663
chr6 11830430 11830438 VAX2 JASPAR yes 70311664
chr6 11830430 11830438 VSX1 JASPAR yes 70311665
chr6 11830430 11830438 VSX2 JASPAR yes 70311666
chr6 11830430 11830438 LMX1A JASPAR yes 99919870
chr6 11830430 11830438 LMX1B JASPAR yes 99919871
chr6 11830430 11830438 NKX6-1 JASPAR yes 99919872
chr6 11830430 11830438 NKX6-2 JASPAR yes 99919873
chr6 11830430 11830438 VAX1 JASPAR yes 99919874
chr6 11830430 11830438 VAX2 JASPAR yes 99919875
chr6 11830430 11830438 VSX1 JASPAR yes 99919876
chr6 11830430 11830438 VSX2 JASPAR yes 99919877
chr6 11830432 11830447 HNF1A JASPAR yes 70311667
chr6 11830432 11830447 HNF1A JASPAR yes 99919878
chr6 11830443 11830458 TFAP2A JASPAR yes 70311668
chr6 11830443 11830458 TFAP2C JASPAR yes 70311669
chr6 11830443 11830458 TFAP2A JASPAR yes 99919879
chr6 11830443 11830458 TFAP2C JASPAR yes 99919880
chr6 11830444 11830455 TFAP2A JASPAR yes 70311670
chr6 11830444 11830455 TFAP2B JASPAR yes 70311671
chr6 11830444 11830455 TFAP2C JASPAR yes 70311672
chr6 11830444 11830455 TFAP2A JASPAR yes 99919881
chr6 11830444 11830455 TFAP2B JASPAR yes 99919882
chr6 11830444 11830455 TFAP2C JASPAR yes 99919883
chr6 11830475 11830485 MSC JASPAR yes 70311673
chr6 11830475 11830485 NHLH1 JASPAR yes 70311674
chr6 11830475 11830485 MSC JASPAR yes 99919884
chr6 11830475 11830485 NHLH1 JASPAR yes 99919885
chr6 11830481 11830494 TFAP2B JASPAR yes 70311675
chr6 11830481 11830494 TFAP2B JASPAR yes 99919886
chr6 11830482 11830495 TFAP2A JASPAR yes 70311676
chr6 11830482 11830495 TFAP2B JASPAR yes 70311677
chr6 11830482 11830495 TFAP2C JASPAR yes 70311678
chr6 11830482 11830495 TFAP2A JASPAR yes 99919887
chr6 11830482 11830495 TFAP2B JASPAR yes 99919888
chr6 11830482 11830495 TFAP2C JASPAR yes 99919889
chr6 11830489 11830510 REST JASPAR yes 70311679
chr6 11830489 11830510 REST JASPAR yes 99919890
chr6 11830490 11830509 REST JASPAR yes 70311680
chr6 11830490 11830509 REST JASPAR yes 99919891
chr6 11830492 11830503 ESRRA JASPAR yes 70311681
chr6 11830492 11830503 ESRRB JASPAR yes 70311682
chr6 11830492 11830503 ESRRA JASPAR yes 99919892
chr6 11830492 11830503 ESRRB JASPAR yes 99919893
chr6 11830493 11830501 NR4A2 JASPAR yes 70311683
chr6 11830493 11830501 NR4A2 JASPAR yes 99919894
chr6 11830494 11830504 RORA JASPAR yes 70311684
chr6 11830494 11830504 RORA JASPAR yes 99919895
chr6 11830511 11830516 USF2 TRANSFAC yes 70311685
chr6 11830511 11830516 USF2 TRANSFAC yes 99919896
chr6 11830514 11830527 ZBTB18 JASPAR yes 70311686
chr6 11830514 11830527 ZBTB18 JASPAR yes 99919897
chr6 11830515 11830527 PKNOX1 JASPAR yes 70311687
chr6 11830515 11830527 PKNOX2 JASPAR yes 70311688
chr6 11830515 11830527 TGIF1 JASPAR yes 70311689
chr6 11830515 11830527 TGIF2 JASPAR yes 70311690
chr6 11830515 11830527 PKNOX1 JASPAR yes 99919898
chr6 11830515 11830527 PKNOX2 JASPAR yes 99919899
chr6 11830515 11830527 TGIF1 JASPAR yes 99919900
chr6 11830515 11830527 TGIF2 JASPAR yes 99919901
chr6 11830516 11830526 MSC JASPAR yes 70311691
chr6 11830516 11830526 MYF6 JASPAR yes 70311692
chr6 11830516 11830526 NHLH1 JASPAR yes 70311693
chr6 11830516 11830526 TFAP4 JASPAR yes 70311694
chr6 11830516 11830526 MSC JASPAR yes 99919902
chr6 11830516 11830526 MYF6 JASPAR yes 99919903
chr6 11830516 11830526 NHLH1 JASPAR yes 99919904
chr6 11830516 11830526 TFAP4 JASPAR yes 99919905
chr6 11830528 11830546 MAFF JASPAR yes 70311695
chr6 11830528 11830546 MAFF JASPAR yes 99919906
chr6 11830529 11830544 MAFK JASPAR yes 70311696
chr6 11830529 11830544 MAFK JASPAR yes 99919907
chr6 11830531 11830536 ATF1 TRANSFAC yes 70311697
chr6 11830531 11830536 ATF1 TRANSFAC yes 99919908
chr6 11830533 11830544 NRL JASPAR yes 70311698
chr6 11830533 11830544 NRL JASPAR yes 99919909
chr6 11830538 11830543 MYC TRANSFAC yes 70311699
chr6 11830538 11830543 MYC TRANSFAC yes 99919910
chr6 11830544 11830552 FOXO3 JASPAR yes 70311700
chr6 11830544 11830552 FOXO3 JASPAR yes 99919911
chr6 11830554 11830565 RUNX1 JASPAR yes 70311701
chr6 11830554 11830565 RUNX1 JASPAR yes 99919912
chr6 11830559 11830574 STAT2 JASPAR yes 70311702
chr6 11830559 11830574 STAT2 JASPAR yes 99919913
chr6 11830560 11830574 STAT1 JASPAR yes 70311703
chr6 11830560 11830574 STAT1 JASPAR yes 99919914
chr6 11830568 11830578 MZF1 JASPAR yes 70311704
chr6 11830568 11830578 MZF1 JASPAR yes 99919915
chr6 11830601 11830606 MYC TRANSFAC yes 70311705
chr6 11830601 11830606 MYC TRANSFAC yes 99919916
chr6 11830612 11830616 YY1 TRANSFAC yes 70311706
chr6 11830612 11830616 YY1 TRANSFAC yes 99919917
chr6 11830613 11830621 FEV JASPAR yes 70311707
chr6 11830613 11830621 FEV JASPAR yes 99919918
chr6 11830619 11830640 MAFG JASPAR yes 70311708
chr6 11830619 11830640 MAFG JASPAR yes 99919919
chr6 11830649 11830666 BCL6B JASPAR yes 70311709
chr6 11830649 11830666 BCL6B JASPAR yes 99919920
chr6 11830652 11830663 STAT1 JASPAR yes 70311710
chr6 11830652 11830663 STAT3 JASPAR yes 70311711
chr6 11830652 11830663 STAT1 JASPAR yes 99919921
chr6 11830652 11830663 STAT3 JASPAR yes 99919922
SNP sites on vista50871[chr6:11830397-11830664]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11830470 rs145732952 G A no 8834106
chr6 11830533 rs574178109 C T
ATF1 MAFF MAFK NRL
8834107
chr6 11830571 rs563213312 A G
MZF1 STAT1 STAT2
8834108
chr6 11830653 rs35477429 CTG C
BCL6B STAT1 STAT3
8834109
Genes possibly regulated by vista50871[chr6:11830397-11830664]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11712287 11807279 - ADTRP ENSG00000111863.8 11807279 0.89 0.99 6161 76882
Expression level of Genes
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miRNAs possibly regulated by vista50871[chr6:11830397-11830664]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results