EnhancerDB
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  3. vista50874[chr6:11877263-11877653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50874[chr6:11877263-11877653]
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Tissue distribution of vista50874
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Transcription factor that possibly regulate vista50874[chr6:11877263-11877653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11877109 11877699 NFIC UCSC Txn Factor no Conserved 108538489
chr6 11877172 11877558 FOXM1 UCSC Txn Factor no Conserved 108538490
chr6 11877172 11877606 ATF2 UCSC Txn Factor no Conserved 108538491
chr6 11877216 11877533 SPI1 UCSC Txn Factor no Conserved 108538492
chr6 11877221 11877624 RUNX3 UCSC Txn Factor no Conserved 108538493
chr6 11877241 11877889 STAT5A UCSC Txn Factor no Conserved 108538494
chr6 11877248 11877470 BATF UCSC Txn Factor no Conserved 108538495
chr6 11877255 11877484 TCF12 UCSC Txn Factor no Conserved 108538496
chr6 11877257 11877490 TCF3 UCSC Txn Factor no Conserved 108538497
chr6 11877282 11877292 BARHL2 JASPAR yes 70311787
chr6 11877282 11877292 BARHL2 JASPAR yes 99924212
chr6 11877285 11877301 ZNF143 JASPAR yes 70311788
chr6 11877285 11877301 ZNF143 JASPAR yes 99924213
chr6 11877295 11877305 REL JASPAR yes 70311789
chr6 11877295 11877305 REL JASPAR yes 99924214
chr6 11877334 11877352 IRF2 JASPAR yes 70311790
chr6 11877334 11877352 IRF2 JASPAR yes 99924215
chr6 11877335 11877356 IRF1 JASPAR yes 70311791
chr6 11877335 11877356 IRF1 JASPAR yes 99924216
chr6 11877337 11877352 PRDM1 JASPAR yes 70311792
chr6 11877337 11877352 STAT2 JASPAR yes 70311793
chr6 11877337 11877352 PRDM1 JASPAR yes 99924217
chr6 11877337 11877352 STAT2 JASPAR yes 99924218
chr6 11877338 11877352 STAT1 JASPAR yes 70311794
chr6 11877338 11877352 STAT1 JASPAR yes 99924219
chr6 11877339 11877351 IRF1 JASPAR yes 70311795
chr6 11877339 11877351 IRF1 JASPAR yes 99924220
chr6 11877339 11877354 IRF9 JASPAR yes 70311796
chr6 11877339 11877354 IRF9 JASPAR yes 99924221
chr6 11877366 11877377 NFE2 JASPAR yes 70311797
chr6 11877366 11877377 NFE2 JASPAR yes 99924222
chr6 11877368 11877374 ATF1 TRANSFAC yes 70311798
chr6 11877368 11877374 ATF1 TRANSFAC yes 99924223
chr6 11877368 11877375 XBP1 TRANSFAC yes 70311799
chr6 11877368 11877375 XBP1 TRANSFAC yes 99924224
chr6 11877368 11877380 CREB1 JASPAR yes 70311800
chr6 11877368 11877380 CREB1 JASPAR yes 99924225
chr6 11877375 11877389 NR2F1 JASPAR yes 70311801
chr6 11877375 11877389 NR2F1 JASPAR yes 99924226
chr6 11877377 11877391 PAX6 JASPAR yes 70311802
chr6 11877377 11877391 PAX6 JASPAR yes 99924227
chr6 11877380 11877394 RXRB JASPAR yes 70311803
chr6 11877380 11877394 RXRG JASPAR yes 70311804
chr6 11877380 11877394 RXRB JASPAR yes 99924228
chr6 11877380 11877394 RXRG JASPAR yes 99924229
chr6 11877380 11877395 NR2C2 JASPAR yes 70311805
chr6 11877380 11877395 NR2C2 JASPAR yes 99924230
chr6 11877394 11877407 SMAD2 JASPAR yes 70311806
chr6 11877394 11877407 SMAD2 JASPAR yes 99924231
chr6 11877421 11877431 HINFP JASPAR yes 70311807
chr6 11877421 11877431 HINFP JASPAR yes 99924232
chr6 11877421 11877439 NR3C1 JASPAR yes 70311808
chr6 11877421 11877439 NR3C1 JASPAR yes 99924233
chr6 11877434 11877442 FOXO3 JASPAR yes 70311809
chr6 11877434 11877442 FOXO3 JASPAR yes 99924234
chr6 11877437 11877443 HiNF-A TRANSFAC yes 70311810
chr6 11877437 11877443 HiNF-A TRANSFAC yes 99924235
chr6 11877443 11877448 SP1 TRANSFAC yes 70311811
chr6 11877443 11877448 SP1 TRANSFAC yes 99924236
chr6 11877445 11877455 GSC2 JASPAR yes 70311812
chr6 11877445 11877455 GSC JASPAR yes 70311813
chr6 11877445 11877455 GSC2 JASPAR yes 99924237
chr6 11877445 11877455 GSC JASPAR yes 99924238
chr6 11877446 11877454 OTX1 JASPAR yes 70311814
chr6 11877446 11877454 OTX2 JASPAR yes 70311815
chr6 11877446 11877454 OTX1 JASPAR yes 99924239
chr6 11877446 11877454 OTX2 JASPAR yes 99924240
chr6 11877471 11877484 POU3F3 JASPAR yes 70311816
chr6 11877471 11877484 POU3F3 JASPAR yes 99924241
chr6 11877471 11877485 POU1F1 JASPAR yes 70311817
chr6 11877471 11877485 POU1F1 JASPAR yes 99924242
chr6 11877480 11877495 HNF4A JASPAR yes 70311818
chr6 11877480 11877495 HNF4A JASPAR yes 99924243
chr6 11877481 11877495 NR2F1 JASPAR yes 70311819
chr6 11877481 11877495 NR2F1 JASPAR yes 99924244
chr6 11877481 11877496 HNF4G JASPAR yes 70311820
chr6 11877481 11877496 HNF4G JASPAR yes 99924245
chr6 11877483 11877498 SOX21 JASPAR yes 70311821
chr6 11877483 11877498 SOX21 JASPAR yes 99924246
chr6 11877487 11877493 NFIC JASPAR yes 70311822
chr6 11877487 11877493 NFIC JASPAR yes 99924247
chr6 11877509 11877524 SCRT1 JASPAR yes 70311823
chr6 11877509 11877524 SCRT1 JASPAR yes 99924248
chr6 11877510 11877520 MYF6 JASPAR yes 70311824
chr6 11877510 11877520 MYF6 JASPAR yes 99924249
chr6 11877519 11877530 NFKB1 JASPAR yes 70311825
chr6 11877519 11877530 NFKB1 JASPAR yes 99924250
chr6 11877520 11877530 NFKB1 JASPAR yes 70311826
chr6 11877520 11877530 NFKB1 JASPAR yes 99924251
chr6 11877569 11877585 POU4F2 JASPAR yes 70311827
chr6 11877569 11877585 POU4F2 JASPAR yes 99924252
chr6 11877571 11877575 YY1 TRANSFAC yes 70311828
chr6 11877571 11877575 YY1 TRANSFAC yes 99924253
chr6 11877582 11877586 NFE TRANSFAC yes 70311829
chr6 11877582 11877586 NFE TRANSFAC yes 99924254
chr6 11877587 11877598 ELK4 JASPAR yes 70311830
chr6 11877587 11877598 FLI1 JASPAR yes 70311831
chr6 11877587 11877598 ELK4 JASPAR yes 99924255
chr6 11877587 11877598 FLI1 JASPAR yes 99924256
chr6 11877587 11877600 ELF3 JASPAR yes 70311832
chr6 11877587 11877600 ELF3 JASPAR yes 99924257
chr6 11877588 11877599 ELF5 JASPAR yes 70311833
chr6 11877588 11877599 ELF5 JASPAR yes 99924258
chr6 11877588 11877600 EHF JASPAR yes 70311834
chr6 11877588 11877600 ELF1 JASPAR yes 70311835
chr6 11877588 11877600 ELF4 JASPAR yes 70311836
chr6 11877588 11877600 EHF JASPAR yes 99924259
chr6 11877588 11877600 ELF1 JASPAR yes 99924260
chr6 11877588 11877600 ELF4 JASPAR yes 99924261
chr6 11877588 11877601 ELF1 JASPAR yes 70311837
chr6 11877588 11877601 ELF1 JASPAR yes 99924262
chr6 11877589 11877596 SPI1 JASPAR yes 70311838
chr6 11877589 11877596 SPI1 JASPAR yes 99924263
chr6 11877589 11877597 EHF JASPAR yes 70311839
chr6 11877589 11877597 FEV JASPAR yes 70311840
chr6 11877589 11877597 EHF JASPAR yes 99924264
chr6 11877589 11877597 FEV JASPAR yes 99924265
chr6 11877647 11877667 RREB1 JASPAR yes 70311841
chr6 11877647 11877667 RREB1 JASPAR yes 99924266
chr6 11877653 11877658 MYC TRANSFAC yes 70311842
chr6 11877653 11877658 MYC TRANSFAC yes 99924267
SNP sites on vista50874[chr6:11877263-11877653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11877348 rs145079610 T G
ATF2 BATF FOXM1 IRF1 IRF2 IRF9 NFIC PRDM1 RUNX3 SPI1 STAT1 STAT2 STAT5A TCF12 TCF3
8834497
chr6 11877365 rs9470341 A G
ATF2 BATF FOXM1 NFIC RUNX3 SPI1 STAT5A TCF12 TCF3
8834498
chr6 11877468 rs186563522 C T
ATF2 BATF FOXM1 NFIC RUNX3 SPI1 STAT5A TCF12 TCF3
8834499
chr6 11877568 rs16872010 A G
ATF2 NFIC RUNX3 STAT5A
8834500
chr6 11877580 rs9462202 A G
ATF2 NFIC POU4F2 RUNX3 STAT5A
8834501
chr6 11877644 rs143629958 T A
NFIC STAT5A
8834502
Genes possibly regulated by vista50874[chr6:11877263-11877653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11712287 11807279 - ADTRP ENSG00000111863.8 11807279 0.89 0.99 6161 30016
Expression level of Genes
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miRNAs possibly regulated by vista50874[chr6:11877263-11877653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results