EnhancerDB
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  3. vista50881[chr6:12049856-12050263]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50881[chr6:12049856-12050263]
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Tissue distribution of vista50881
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Transcription factor that possibly regulate vista50881[chr6:12049856-12050263]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12049841 12049859 NR3C1 JASPAR yes 70312067
chr6 12049841 12049859 NR3C1 JASPAR yes 99940450
chr6 12049855 12049859 NFE TRANSFAC yes 70312068
chr6 12049855 12049859 NFE TRANSFAC yes 99940452
chr6 12049878 12049893 MEF2A JASPAR yes 70312069
chr6 12049878 12049893 MEF2A JASPAR yes 99940453
chr6 12049879 12049891 FOXI1 JASPAR yes 70312070
chr6 12049879 12049891 FOXI1 JASPAR yes 99940454
chr6 12049879 12049894 MEF2C JASPAR yes 70312071
chr6 12049879 12049894 MEF2C JASPAR yes 99940455
chr6 12049880 12049892 MEF2A JASPAR yes 70312072
chr6 12049880 12049892 MEF2B JASPAR yes 70312073
chr6 12049880 12049892 MEF2D JASPAR yes 70312074
chr6 12049880 12049892 MEF2A JASPAR yes 99940456
chr6 12049880 12049892 MEF2B JASPAR yes 99940457
chr6 12049880 12049892 MEF2D JASPAR yes 99940458
chr6 12049881 12049891 MEF2A JASPAR yes 70312075
chr6 12049881 12049891 MEF2A JASPAR yes 99940459
chr6 12049882 12049886 YY1 TRANSFAC yes 70312076
chr6 12049882 12049886 YY1 TRANSFAC yes 99940460
chr6 12049899 12049911 YY1 JASPAR yes 70312077
chr6 12049899 12049911 YY1 JASPAR yes 99940461
chr6 12049917 12049931 JUN JASPAR yes 70312078
chr6 12049917 12049931 JUN JASPAR yes 99940462
chr6 12049919 12049930 BATF JASPAR yes 70312079
chr6 12049919 12049930 BATF JASPAR yes 99940463
chr6 12049920 12049931 JUNB JASPAR yes 70312080
chr6 12049920 12049931 JUNB JASPAR yes 99940464
chr6 12049921 12049932 FOS JASPAR yes 70312081
chr6 12049921 12049932 FOSL1 JASPAR yes 70312082
chr6 12049921 12049932 FOS JASPAR yes 99940465
chr6 12049921 12049932 FOSL1 JASPAR yes 99940466
chr6 12049922 12049931 JDP2 JASPAR yes 70312083
chr6 12049922 12049931 JDP2 JASPAR yes 99940467
chr6 12049923 12049934 BATF JASPAR yes 70312084
chr6 12049923 12049934 BATF JASPAR yes 99940468
chr6 12049934 12049938 YY1 TRANSFAC yes 70312085
chr6 12049934 12049938 YY1 TRANSFAC yes 99940469
chr6 12049934 12049949 FOXP1 JASPAR yes 70312086
chr6 12049934 12049949 FOXP1 JASPAR yes 99940470
chr6 12049946 12049954 HOXA5 JASPAR yes 70312087
chr6 12049946 12049954 HOXA5 JASPAR yes 99940471
chr6 12049950 12049961 FOXH1 JASPAR yes 70312088
chr6 12049950 12049961 FOXH1 JASPAR yes 99940472
chr6 12049951 12049957 ZNF354C JASPAR yes 70312089
chr6 12049951 12049957 ZNF354C JASPAR yes 99940473
chr6 12049951 12049961 RELA JASPAR yes 70312090
chr6 12049951 12049961 REL JASPAR yes 70312091
chr6 12049951 12049961 RELA JASPAR yes 99940474
chr6 12049951 12049961 REL JASPAR yes 99940475
chr6 12049954 12049959 H4TF1 TRANSFAC yes 70312092
chr6 12049954 12049959 H4TF1 TRANSFAC yes 99940476
chr6 12049962 12049976 POU1F1 JASPAR yes 70312093
chr6 12049962 12049976 POU1F1 JASPAR yes 99940477
chr6 12049985 12049995 NKX2-3 JASPAR yes 70312094
chr6 12049985 12049995 NKX2-3 JASPAR yes 99940478
chr6 12049986 12049995 NKX2-8 JASPAR yes 70312095
chr6 12049986 12049995 NKX2-8 JASPAR yes 99940479
chr6 12049998 12050008 HOXD13 JASPAR yes 70312096
chr6 12049998 12050008 HOXD13 JASPAR yes 99940480
chr6 12049998 12050009 HOXA10 JASPAR yes 70312097
chr6 12049998 12050009 HOXA10 JASPAR yes 99940481
chr6 12050004 12050025 IRF1 JASPAR yes 70312098
chr6 12050004 12050025 IRF1 JASPAR yes 99940482
chr6 12050006 12050021 STAT2 JASPAR yes 70312099
chr6 12050006 12050021 STAT2 JASPAR yes 99940483
chr6 12050007 12050018 ELF5 JASPAR yes 70312100
chr6 12050007 12050018 ELF5 JASPAR yes 99940484
chr6 12050007 12050020 ELF1 JASPAR yes 70312101
chr6 12050007 12050020 ELF1 JASPAR yes 99940485
chr6 12050007 12050021 SPI1 JASPAR yes 70312102
chr6 12050007 12050021 SPIC JASPAR yes 70312103
chr6 12050007 12050021 SPI1 JASPAR yes 99940486
chr6 12050007 12050021 SPIC JASPAR yes 99940487
chr6 12050008 12050015 SPI1 JASPAR yes 70312104
chr6 12050008 12050015 SPI1 JASPAR yes 99940488
chr6 12050008 12050016 FEV JASPAR yes 70312105
chr6 12050008 12050016 FEV JASPAR yes 99940489
chr6 12050010 12050015 ETS2 TRANSFAC yes 70312106
chr6 12050010 12050015 ETS2 TRANSFAC yes 99940490
chr6 12050024 12050042 SRF JASPAR yes 70312107
chr6 12050024 12050042 SRF JASPAR yes 99940491
chr6 12050030 12050034 YY1 TRANSFAC yes 70312108
chr6 12050030 12050034 YY1 TRANSFAC yes 99940492
chr6 12050037 12050042 H4TF1 TRANSFAC yes 70312109
chr6 12050037 12050042 H4TF1 TRANSFAC yes 99940493
chr6 12050048 12050058 HOXA13 JASPAR yes 70312110
chr6 12050048 12050058 HOXB13 JASPAR yes 70312111
chr6 12050048 12050058 HOXD13 JASPAR yes 70312112
chr6 12050048 12050058 HOXA13 JASPAR yes 99940494
chr6 12050048 12050058 HOXB13 JASPAR yes 99940495
chr6 12050048 12050058 HOXD13 JASPAR yes 99940496
chr6 12050048 12050059 HOXA10 JASPAR yes 70312113
chr6 12050048 12050059 HOXA10 JASPAR yes 99940497
chr6 12050049 12050058 CDX1 JASPAR yes 70312114
chr6 12050049 12050058 CDX1 JASPAR yes 99940498
chr6 12050051 12050062 NFIL3 JASPAR yes 70312115
chr6 12050051 12050062 NFIL3 JASPAR yes 99940499
chr6 12050052 12050063 CEBPA JASPAR yes 70312116
chr6 12050052 12050063 CEBPA JASPAR yes 99940500
chr6 12050052 12050064 DBP JASPAR yes 70312117
chr6 12050052 12050064 HLF JASPAR yes 70312118
chr6 12050052 12050064 TEF JASPAR yes 70312119
chr6 12050052 12050064 DBP JASPAR yes 99940501
chr6 12050052 12050064 HLF JASPAR yes 99940502
chr6 12050052 12050064 TEF JASPAR yes 99940503
chr6 12050053 12050064 CEBPB JASPAR yes 70312120
chr6 12050053 12050064 CEBPB JASPAR yes 99940504
chr6 12050054 12050065 NFIL3 JASPAR yes 70312121
chr6 12050054 12050065 NFIL3 JASPAR yes 99940505
chr6 12050058 12050068 POU6F2 JASPAR yes 70312122
chr6 12050058 12050068 POU6F2 JASPAR yes 99940506
chr6 12050070 12050074 YY1 TRANSFAC yes 70312123
chr6 12050070 12050074 YY1 TRANSFAC yes 99940507
chr6 12050073 12050079 TCF4 TRANSFAC yes 70312124
chr6 12050073 12050079 TCF4 TRANSFAC yes 99940508
chr6 12050076 12050087 CEBPA JASPAR yes 70312125
chr6 12050076 12050087 CEBPA JASPAR yes 99940509
chr6 12050077 12050087 CEBPB JASPAR yes 70312126
chr6 12050077 12050087 CEBPD JASPAR yes 70312127
chr6 12050077 12050087 CEBPE JASPAR yes 70312128
chr6 12050077 12050087 CEBPB JASPAR yes 99940510
chr6 12050077 12050087 CEBPD JASPAR yes 99940511
chr6 12050077 12050087 CEBPE JASPAR yes 99940512
chr6 12050077 12050088 CEBPB JASPAR yes 70312129
chr6 12050077 12050088 CEBPB JASPAR yes 99940513
chr6 12050089 12050103 SPIC JASPAR yes 70312130
chr6 12050089 12050103 SPIC JASPAR yes 99940514
chr6 12050092 12050097 ETS2 TRANSFAC yes 70312131
chr6 12050092 12050097 ETS2 TRANSFAC yes 99940515
chr6 12050100 12050111 NFIL3 JASPAR yes 70312132
chr6 12050100 12050111 NFIL3 JASPAR yes 99940516
chr6 12050105 12050108 MYB TRANSFAC yes 70312133
chr6 12050105 12050108 MYB TRANSFAC yes 99940517
chr6 12050122 12050134 GRHL1 JASPAR yes 70312134
chr6 12050122 12050134 GRHL1 JASPAR yes 99940518
chr6 12050123 12050133 TFCP2 JASPAR yes 70312135
chr6 12050123 12050133 TFCP2 JASPAR yes 99940519
chr6 12050134 12050137 MYB TRANSFAC yes 70312136
chr6 12050134 12050137 MYB TRANSFAC yes 99940520
chr6 12050137 12050141 YY1 TRANSFAC yes 70312137
chr6 12050137 12050141 YY1 TRANSFAC yes 99940521
chr6 12050146 12050161 LEF1 JASPAR yes 70312138
chr6 12050146 12050161 LEF1 JASPAR yes 99940522
chr6 12050179 12050193 IRF7 JASPAR yes 70312139
chr6 12050179 12050193 IRF7 JASPAR yes 99940523
chr6 12050218 12050229 EBF1 JASPAR yes 70312140
chr6 12050218 12050229 EBF1 JASPAR yes 99940524
chr6 12050231 12050241 ETV4 JASPAR yes 70312141
chr6 12050231 12050241 ETV4 JASPAR yes 99940525
chr6 12050233 12050238 GATA2 JASPAR yes 70312142
chr6 12050233 12050238 GATA2 JASPAR yes 99940526
chr6 12050253 12050259 NFE2 TRANSFAC yes 70312143
chr6 12050253 12050259 NFE2 TRANSFAC yes 99940527
chr6 12050253 12050268 SCRT1 JASPAR yes 70312144
chr6 12050253 12050268 SCRT1 JASPAR yes 99940528
SNP sites on vista50881[chr6:12049856-12050263]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12049893 rs557841914 TAGAA T
MEF2A MEF2C
8835952
chr6 12049919 rs183913709 A G
BATF JUN
8835953
chr6 12049963 rs188578760 C G
POU1F1
8835954
chr6 12050095 rs116734395 C T
ETS2 SPIC
8835955
chr6 12050103 rs185760697 A C,G
NFIL3 SPIC
8835956
chr6 12050194 rs190079682 G A no 8835957
chr6 12050231 rs6934047 A G
ETV4
8835958
chr6 12050252 rs539320904 G A no 8835959
Genes possibly regulated by vista50881[chr6:12049856-12050263]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12008995 12165232 + HIVEP1 ENSG00000095951.12 12008995 0.71 0.99 6162 59139
Expression level of Genes
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miRNAs possibly regulated by vista50881[chr6:12049856-12050263]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results