EnhancerDB
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  3. vista50885[chr6:12208445-12208821]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50885[chr6:12208445-12208821]
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Tissue distribution of vista50885
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Transcription factor that possibly regulate vista50885[chr6:12208445-12208821]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12208429 12208713 FOS UCSC Txn Factor no Conserved 108538522
chr6 12208454 12208465 TBX20 JASPAR yes 70312252
chr6 12208454 12208465 TBX20 JASPAR yes 99951532
chr6 12208456 12208459 MYB TRANSFAC yes 70312253
chr6 12208456 12208459 MYB TRANSFAC yes 99951533
chr6 12208456 12208464 MGA JASPAR yes 70312254
chr6 12208456 12208464 TBX15 JASPAR yes 70312255
chr6 12208456 12208464 TBX1 JASPAR yes 70312256
chr6 12208456 12208464 TBX4 JASPAR yes 70312257
chr6 12208456 12208464 TBX5 JASPAR yes 70312258
chr6 12208456 12208464 MGA JASPAR yes 99951534
chr6 12208456 12208464 TBX15 JASPAR yes 99951535
chr6 12208456 12208464 TBX1 JASPAR yes 99951536
chr6 12208456 12208464 TBX4 JASPAR yes 99951537
chr6 12208456 12208464 TBX5 JASPAR yes 99951538
chr6 12208493 12208498 NFY TRANSFAC yes 70312259
chr6 12208493 12208498 NFY TRANSFAC yes 99951539
chr6 12208505 12208511 LEF1 TRANSFAC yes 70312260
chr6 12208505 12208511 SOX10 JASPAR yes 70312261
chr6 12208505 12208511 LEF1 TRANSFAC yes 99951540
chr6 12208505 12208511 SOX10 JASPAR yes 99951541
chr6 12208512 12208530 MAFF JASPAR yes 70312262
chr6 12208512 12208530 MAFF JASPAR yes 99951542
chr6 12208514 12208529 MAFK JASPAR yes 70312263
chr6 12208514 12208529 MAFK JASPAR yes 99951543
chr6 12208514 12208535 MAFG JASPAR yes 70312264
chr6 12208514 12208535 MAFG JASPAR yes 99951544
chr6 12208515 12208525 TFAP4 JASPAR yes 70312265
chr6 12208515 12208525 TFAP4 JASPAR yes 99951545
chr6 12208515 12208529 JUN JASPAR yes 70312266
chr6 12208515 12208529 JUN JASPAR yes 99951546
chr6 12208518 12208529 JUNB JASPAR yes 70312267
chr6 12208518 12208529 NFE2L2 JASPAR yes 70312268
chr6 12208518 12208529 JUNB JASPAR yes 99951547
chr6 12208518 12208529 NFE2L2 JASPAR yes 99951548
chr6 12208519 12208530 FOS JASPAR yes 70312269
chr6 12208519 12208530 FOSL1 JASPAR yes 70312270
chr6 12208519 12208530 JUND JASPAR yes 70312271
chr6 12208519 12208530 NFE2 JASPAR yes 70312272
chr6 12208519 12208530 FOS JASPAR yes 99951549
chr6 12208519 12208530 FOSL1 JASPAR yes 99951550
chr6 12208519 12208530 JUND JASPAR yes 99951551
chr6 12208519 12208530 NFE2 JASPAR yes 99951552
chr6 12208520 12208529 JDP2 JASPAR yes 70312273
chr6 12208520 12208529 JDP2 JASPAR yes 99951553
chr6 12208520 12208531 FOSL2 JASPAR yes 70312274
chr6 12208520 12208531 JUNB JASPAR yes 70312275
chr6 12208520 12208531 FOSL2 JASPAR yes 99951554
chr6 12208520 12208531 JUNB JASPAR yes 99951555
chr6 12208520 12208534 JUN JASPAR yes 70312276
chr6 12208520 12208534 JUN JASPAR yes 99951556
chr6 12208521 12208532 BATF JASPAR yes 70312277
chr6 12208521 12208532 BATF JASPAR yes 99951557
chr6 12208577 12208585 MEIS2 JASPAR yes 70312278
chr6 12208577 12208585 MEIS3 JASPAR yes 70312279
chr6 12208577 12208585 MEIS2 JASPAR yes 99951558
chr6 12208577 12208585 MEIS3 JASPAR yes 99951559
chr6 12208578 12208590 PKNOX1 JASPAR yes 70312280
chr6 12208578 12208590 PKNOX2 JASPAR yes 70312281
chr6 12208578 12208590 TGIF1 JASPAR yes 70312282
chr6 12208578 12208590 TGIF2 JASPAR yes 70312283
chr6 12208578 12208590 PKNOX1 JASPAR yes 99951560
chr6 12208578 12208590 PKNOX2 JASPAR yes 99951561
chr6 12208578 12208590 TGIF1 JASPAR yes 99951562
chr6 12208578 12208590 TGIF2 JASPAR yes 99951563
chr6 12208584 12208597 ELF1 JASPAR yes 70312284
chr6 12208584 12208597 ELF1 JASPAR yes 99951564
chr6 12208588 12208596 EHF JASPAR yes 70312285
chr6 12208588 12208596 FEV JASPAR yes 70312286
chr6 12208588 12208596 EHF JASPAR yes 99951565
chr6 12208588 12208596 FEV JASPAR yes 99951566
chr6 12208589 12208596 SPI1 JASPAR yes 70312287
chr6 12208589 12208596 SPI1 JASPAR yes 99951567
chr6 12208602 12208613 CEBPA JASPAR yes 70312288
chr6 12208602 12208613 CEBPA JASPAR yes 99951568
chr6 12208603 12208614 CEBPB JASPAR yes 70312289
chr6 12208603 12208614 CEBPB JASPAR yes 99951569
chr6 12208610 12208628 SRF JASPAR yes 70312290
chr6 12208610 12208628 SRF JASPAR yes 99951570
chr6 12208612 12208628 SRF JASPAR yes 70312291
chr6 12208612 12208628 SRF JASPAR yes 99951571
chr6 12208623 12208628 ETS2 TRANSFAC yes 70312292
chr6 12208623 12208628 ETS2 TRANSFAC yes 99951572
chr6 12208623 12208637 STAT1 JASPAR yes 70312293
chr6 12208623 12208637 STAT1 JASPAR yes 99951573
chr6 12208631 12208645 RORA JASPAR yes 70312294
chr6 12208631 12208645 RORA JASPAR yes 99951574
chr6 12208637 12208643 ESR1 TRANSFAC yes 70312295
chr6 12208637 12208643 ESR1 TRANSFAC yes 99951575
chr6 12208639 12208643 ESR1 TRANSFAC yes 70312296
chr6 12208639 12208643 ESR1 TRANSFAC yes 99951576
chr6 12208639 12208650 USF1 JASPAR yes 70312297
chr6 12208639 12208650 USF2 JASPAR yes 70312298
chr6 12208639 12208650 USF1 JASPAR yes 99951577
chr6 12208639 12208650 USF2 JASPAR yes 99951578
chr6 12208640 12208647 USF2 TRANSFAC yes 70312299
chr6 12208640 12208647 USF2 TRANSFAC yes 99951579
chr6 12208640 12208650 SREBF1 JASPAR yes 70312300
chr6 12208640 12208650 SREBF2 JASPAR yes 70312301
chr6 12208640 12208650 TFEC JASPAR yes 70312302
chr6 12208640 12208650 SREBF1 JASPAR yes 99951580
chr6 12208640 12208650 SREBF2 JASPAR yes 99951581
chr6 12208640 12208650 TFEC JASPAR yes 99951582
chr6 12208642 12208647 USF2 TRANSFAC yes 70312303
chr6 12208642 12208647 USF2 TRANSFAC yes 99951583
chr6 12208662 12208665 MYB TRANSFAC yes 70312304
chr6 12208662 12208665 MYB TRANSFAC yes 99951584
chr6 12208679 12208687 EHF JASPAR yes 70312305
chr6 12208679 12208687 EHF JASPAR yes 99951585
chr6 12208683 12208688 ETS2 TRANSFAC yes 70312306
chr6 12208683 12208688 ETS2 TRANSFAC yes 99951586
chr6 12208699 12208705 SP1 TRANSFAC yes 70312307
chr6 12208699 12208705 SP1 TRANSFAC yes 99951587
chr6 12208700 12208705 SP1 TRANSFAC yes 70312308
chr6 12208700 12208705 SP1 TRANSFAC yes 99951588
chr6 12208759 12208779 ESR1 JASPAR yes 70312309
chr6 12208759 12208779 ESR1 JASPAR yes 99951589
chr6 12208763 12208775 CREB1 JASPAR yes 70312310
chr6 12208763 12208775 CREB1 JASPAR yes 99951590
chr6 12208769 12208779 SP1 JASPAR yes 70312311
chr6 12208769 12208779 SP1 JASPAR yes 99951591
chr6 12208770 12208778 SP1 TRANSFAC yes 70312312
chr6 12208770 12208778 SP1 TRANSFAC yes 99951592
SNP sites on vista50885[chr6:12208445-12208821]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12208469 rs57471104 C T
FOS
8836932
chr6 12208665 rs219985 A T
FOS MYB
8836933
chr6 12208819 rs219986 G T no 8836934
Genes possibly regulated by vista50885[chr6:12208445-12208821]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 18225
Expression level of Genes
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miRNAs possibly regulated by vista50885[chr6:12208445-12208821]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results