EnhancerDB
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  3. vista50886[chr6:12209013-12209223]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50886[chr6:12209013-12209223]
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Tissue distribution of vista50886
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Transcription factor that possibly regulate vista50886[chr6:12209013-12209223]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12209018 12209037 REST JASPAR yes 70312313
chr6 12209018 12209037 REST JASPAR yes 99951610
chr6 12209020 12209031 NRL JASPAR yes 70312314
chr6 12209020 12209031 NRL JASPAR yes 99951611
chr6 12209027 12209035 TBX15 JASPAR yes 70312315
chr6 12209027 12209035 TBX1 JASPAR yes 70312316
chr6 12209027 12209035 TBX4 JASPAR yes 70312317
chr6 12209027 12209035 TBX5 JASPAR yes 70312318
chr6 12209027 12209035 TBX15 JASPAR yes 99951612
chr6 12209027 12209035 TBX1 JASPAR yes 99951613
chr6 12209027 12209035 TBX4 JASPAR yes 99951614
chr6 12209027 12209035 TBX5 JASPAR yes 99951615
chr6 12209028 12209038 SREBF2 JASPAR yes 70312319
chr6 12209028 12209038 SREBF2 JASPAR yes 99951616
chr6 12209029 12209038 SNAI2 JASPAR yes 70312320
chr6 12209029 12209038 SNAI2 JASPAR yes 99951617
chr6 12209030 12209035 USF2 TRANSFAC yes 70312321
chr6 12209030 12209035 USF2 TRANSFAC yes 99951618
chr6 12209087 12209099 TAL1 JASPAR yes 70312322
chr6 12209087 12209099 TAL1 JASPAR yes 99951619
chr6 12209097 12209109 FOXI1 JASPAR yes 70312323
chr6 12209097 12209109 FOXI1 JASPAR yes 99951620
chr6 12209117 12209121 NFE TRANSFAC yes 70312324
chr6 12209117 12209121 NFE TRANSFAC yes 99951621
chr6 12209117 12209122 GATA1 TRANSFAC yes 70312325
chr6 12209117 12209122 GATA1 TRANSFAC yes 99951622
chr6 12209117 12209123 GATA3 JASPAR yes 70312326
chr6 12209117 12209123 GATA3 JASPAR yes 99951623
chr6 12209120 12209131 JUND JASPAR yes 70312327
chr6 12209120 12209131 JUND JASPAR yes 99951624
chr6 12209158 12209163 ETS2 TRANSFAC yes 70312328
chr6 12209158 12209163 ETS2 TRANSFAC yes 99951625
chr6 12209176 12209186 GSC2 JASPAR yes 70312329
chr6 12209176 12209186 GSC JASPAR yes 70312330
chr6 12209176 12209186 GSC2 JASPAR yes 99951626
chr6 12209176 12209186 GSC JASPAR yes 99951627
chr6 12209177 12209185 OTX1 JASPAR yes 70312331
chr6 12209177 12209185 OTX2 JASPAR yes 70312332
chr6 12209177 12209185 RHOXF1 JASPAR yes 70312333
chr6 12209177 12209185 OTX1 JASPAR yes 99951628
chr6 12209177 12209185 OTX2 JASPAR yes 99951629
chr6 12209177 12209185 RHOXF1 JASPAR yes 99951630
chr6 12209177 12209186 PITX3 JASPAR yes 70312334
chr6 12209177 12209186 PITX3 JASPAR yes 99951631
chr6 12209201 12209209 FOXO3 JASPAR yes 70312335
chr6 12209201 12209209 FOXO3 JASPAR yes 99951632
chr6 12209214 12209218 YY1 TRANSFAC yes 70312336
chr6 12209214 12209218 YY1 TRANSFAC yes 99951633
SNP sites on vista50886[chr6:12209013-12209223]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12209121 rs140810 TCTGA T
GATA1 GATA3 JUND NFE
8836938
chr6 12209121 rs370464296 TCTGA T
GATA1 GATA3 JUND NFE
8836939
Genes possibly regulated by vista50886[chr6:12209013-12209223]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 18627
Expression level of Genes
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miRNAs possibly regulated by vista50886[chr6:12209013-12209223]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results