EnhancerDB
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  3. vista50887[chr6:12232536-12232937]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50887[chr6:12232536-12232937]
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Tissue distribution of vista50887
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Transcription factor that possibly regulate vista50887[chr6:12232536-12232937]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12232699 12232931 RUNX3 UCSC Txn Factor no Conserved 108538523
chr6 12232532 12232540 FOXL1 JASPAR yes 70312337
chr6 12232532 12232540 FOXL1 JASPAR yes 99953184
chr6 12232543 12232556 DUXA JASPAR yes 70312338
chr6 12232543 12232556 DUXA JASPAR yes 99953185
chr6 12232544 12232555 DUX4 JASPAR yes 70312339
chr6 12232544 12232555 PHOX2A JASPAR yes 70312340
chr6 12232544 12232555 DUX4 JASPAR yes 99953186
chr6 12232544 12232555 PHOX2A JASPAR yes 99953187
chr6 12232545 12232560 JUND JASPAR yes 70312341
chr6 12232545 12232560 JUND JASPAR yes 99953188
chr6 12232546 12232559 JUN JASPAR yes 70312342
chr6 12232546 12232559 JUN JASPAR yes 99953189
chr6 12232552 12232564 TAL1 JASPAR yes 70312343
chr6 12232552 12232564 TAL1 JASPAR yes 99953190
chr6 12232553 12232565 BHLHE23 JASPAR yes 70312344
chr6 12232553 12232565 BHLHE23 JASPAR yes 99953191
chr6 12232554 12232564 BHLHE22 JASPAR yes 70312345
chr6 12232554 12232564 NEUROD2 JASPAR yes 70312346
chr6 12232554 12232564 OLIG1 JASPAR yes 70312347
chr6 12232554 12232564 OLIG2 JASPAR yes 70312348
chr6 12232554 12232564 OLIG3 JASPAR yes 70312349
chr6 12232554 12232564 BHLHE22 JASPAR yes 99953192
chr6 12232554 12232564 NEUROD2 JASPAR yes 99953193
chr6 12232554 12232564 OLIG1 JASPAR yes 99953194
chr6 12232554 12232564 OLIG2 JASPAR yes 99953195
chr6 12232554 12232564 OLIG3 JASPAR yes 99953196
chr6 12232561 12232566 ETS2 TRANSFAC yes 70312350
chr6 12232561 12232566 ETS2 TRANSFAC yes 99953197
chr6 12232571 12232586 MEF2A JASPAR yes 70312351
chr6 12232571 12232586 MEF2A JASPAR yes 99953198
chr6 12232572 12232587 MEF2C JASPAR yes 70312352
chr6 12232572 12232587 MEF2C JASPAR yes 99953199
chr6 12232573 12232585 MEF2A JASPAR yes 70312353
chr6 12232573 12232585 MEF2B JASPAR yes 70312354
chr6 12232573 12232585 MEF2D JASPAR yes 70312355
chr6 12232573 12232585 MEF2A JASPAR yes 99953200
chr6 12232573 12232585 MEF2B JASPAR yes 99953201
chr6 12232573 12232585 MEF2D JASPAR yes 99953202
chr6 12232574 12232584 MEF2A JASPAR yes 70312356
chr6 12232574 12232584 MEF2A JASPAR yes 99953203
chr6 12232575 12232579 YY1 TRANSFAC yes 70312357
chr6 12232575 12232579 YY1 TRANSFAC yes 99953204
chr6 12232586 12232607 IRF1 JASPAR yes 70312358
chr6 12232586 12232607 IRF1 JASPAR yes 99953205
chr6 12232588 12232603 STAT2 JASPAR yes 70312359
chr6 12232588 12232603 STAT2 JASPAR yes 99953206
chr6 12232600 12232612 PBX1 JASPAR yes 70312360
chr6 12232600 12232612 PBX1 JASPAR yes 99953207
chr6 12232605 12232616 CDX2 JASPAR yes 70312361
chr6 12232605 12232616 CDX2 JASPAR yes 99953208
chr6 12232606 12232617 HOXA10 JASPAR yes 70312362
chr6 12232606 12232617 HOXA10 JASPAR yes 99953209
chr6 12232607 12232616 CDX1 JASPAR yes 70312363
chr6 12232607 12232616 CDX1 JASPAR yes 99953210
chr6 12232607 12232617 HOXA13 JASPAR yes 70312364
chr6 12232607 12232617 HOXB13 JASPAR yes 70312365
chr6 12232607 12232617 HOXD13 JASPAR yes 70312366
chr6 12232607 12232617 HOXA13 JASPAR yes 99953211
chr6 12232607 12232617 HOXB13 JASPAR yes 99953212
chr6 12232607 12232617 HOXD13 JASPAR yes 99953213
chr6 12232611 12232627 SOX8 JASPAR yes 70312367
chr6 12232611 12232627 SOX8 JASPAR yes 99953214
chr6 12232627 12232639 FOXI1 JASPAR yes 70312368
chr6 12232627 12232639 FOXI1 JASPAR yes 99953215
chr6 12232633 12232643 RORA JASPAR yes 70312369
chr6 12232633 12232643 RORA JASPAR yes 99953216
chr6 12232634 12232647 NR2F1 JASPAR yes 70312370
chr6 12232634 12232647 NR2F1 JASPAR yes 99953217
chr6 12232638 12232642 ESR1 TRANSFAC yes 70312371
chr6 12232638 12232642 ESR1 TRANSFAC yes 99953218
chr6 12232638 12232649 USF1 JASPAR yes 70312372
chr6 12232638 12232649 USF1 JASPAR yes 99953219
chr6 12232639 12232649 TFEB JASPAR yes 70312373
chr6 12232639 12232649 TFEC JASPAR yes 70312374
chr6 12232639 12232649 TFEB JASPAR yes 99953220
chr6 12232639 12232649 TFEC JASPAR yes 99953221
chr6 12232647 12232658 STAT3 JASPAR yes 70312375
chr6 12232647 12232658 STAT3 JASPAR yes 99953222
chr6 12232653 12232667 BATF3 JASPAR yes 70312376
chr6 12232653 12232667 BATF3 JASPAR yes 99953223
chr6 12232656 12232677 REST JASPAR yes 70312377
chr6 12232656 12232677 REST JASPAR yes 99953224
chr6 12232670 12232681 CDX2 JASPAR yes 70312378
chr6 12232670 12232681 CDX2 JASPAR yes 99953225
chr6 12232671 12232682 HOXA10 JASPAR yes 70312379
chr6 12232671 12232682 HOXC11 JASPAR yes 70312380
chr6 12232671 12232682 HOXC12 JASPAR yes 70312381
chr6 12232671 12232682 HOXC13 JASPAR yes 70312382
chr6 12232671 12232682 HOXD12 JASPAR yes 70312383
chr6 12232671 12232682 HOXA10 JASPAR yes 99953226
chr6 12232671 12232682 HOXC11 JASPAR yes 99953227
chr6 12232671 12232682 HOXC12 JASPAR yes 99953228
chr6 12232671 12232682 HOXC13 JASPAR yes 99953229
chr6 12232671 12232682 HOXD12 JASPAR yes 99953230
chr6 12232672 12232681 CDX1 JASPAR yes 70312384
chr6 12232672 12232681 CDX1 JASPAR yes 99953231
chr6 12232672 12232682 HOXA13 JASPAR yes 70312385
chr6 12232672 12232682 HOXB13 JASPAR yes 70312386
chr6 12232672 12232682 HOXC10 JASPAR yes 70312387
chr6 12232672 12232682 HOXD11 JASPAR yes 70312388
chr6 12232672 12232682 HOXD13 JASPAR yes 70312389
chr6 12232672 12232682 HOXA13 JASPAR yes 99953232
chr6 12232672 12232682 HOXB13 JASPAR yes 99953233
chr6 12232672 12232682 HOXC10 JASPAR yes 99953234
chr6 12232672 12232682 HOXD11 JASPAR yes 99953235
chr6 12232672 12232682 HOXD13 JASPAR yes 99953236
chr6 12232683 12232701 MAFF JASPAR yes 70312390
chr6 12232683 12232701 MAFF JASPAR yes 99953237
chr6 12232686 12232700 JUN JASPAR yes 70312391
chr6 12232686 12232700 JUN JASPAR yes 99953238
chr6 12232688 12232699 BATF JASPAR yes 70312392
chr6 12232688 12232699 BATF JASPAR yes 99953239
chr6 12232689 12232700 JUNB JASPAR yes 70312393
chr6 12232689 12232700 NFE2L2 JASPAR yes 70312394
chr6 12232689 12232700 JUNB JASPAR yes 99953240
chr6 12232689 12232700 NFE2L2 JASPAR yes 99953241
chr6 12232690 12232701 FOS JASPAR yes 70312395
chr6 12232690 12232701 FOSL1 JASPAR yes 70312396
chr6 12232690 12232701 JUND JASPAR yes 70312397
chr6 12232690 12232701 FOS JASPAR yes 99953242
chr6 12232690 12232701 FOSL1 JASPAR yes 99953243
chr6 12232690 12232701 JUND JASPAR yes 99953244
chr6 12232691 12232705 JUN JASPAR yes 70312398
chr6 12232691 12232705 JUN JASPAR yes 99953245
chr6 12232692 12232699 JUN TRANSFAC yes 70312399
chr6 12232692 12232699 JUN TRANSFAC yes 99953246
chr6 12232692 12232703 BATF JASPAR yes 70312400
chr6 12232692 12232703 BATF JASPAR yes 99953247
chr6 12232702 12232706 YY1 TRANSFAC yes 70312401
chr6 12232702 12232706 YY1 TRANSFAC yes 99953248
chr6 12232739 12232754 SCRT1 JASPAR yes 70312402
chr6 12232739 12232754 SCRT1 JASPAR yes 99953249
chr6 12232741 12232744 MYB TRANSFAC yes 70312403
chr6 12232741 12232744 MYB TRANSFAC yes 99953250
chr6 12232741 12232754 SCRT2 JASPAR yes 70312404
chr6 12232741 12232754 SCRT2 JASPAR yes 99953251
chr6 12232745 12232757 TEAD1 JASPAR yes 70312405
chr6 12232745 12232757 TEAD1 JASPAR yes 99953252
chr6 12232746 12232757 FOXH1 JASPAR yes 70312406
chr6 12232746 12232757 FOXH1 JASPAR yes 99953253
chr6 12232747 12232757 TEAD1 JASPAR yes 70312407
chr6 12232747 12232757 TEAD4 JASPAR yes 70312408
chr6 12232747 12232757 TEAD1 JASPAR yes 99953254
chr6 12232747 12232757 TEAD4 JASPAR yes 99953255
chr6 12232748 12232756 TEAD3 JASPAR yes 70312409
chr6 12232748 12232756 TEAD3 JASPAR yes 99953256
chr6 12232751 12232762 DMRT3 JASPAR yes 70312410
chr6 12232751 12232762 DMRT3 JASPAR yes 99953257
chr6 12232752 12232763 CEBPB JASPAR yes 70312411
chr6 12232752 12232763 CEBPB JASPAR yes 99953258
chr6 12232766 12232770 YY1 TRANSFAC yes 70312412
chr6 12232766 12232770 YY1 TRANSFAC yes 99953259
chr6 12232793 12232801 MEIS2 JASPAR yes 70312413
chr6 12232793 12232801 MEIS3 JASPAR yes 70312414
chr6 12232793 12232801 MEIS2 JASPAR yes 99953260
chr6 12232793 12232801 MEIS3 JASPAR yes 99953261
chr6 12232794 12232798 NFE TRANSFAC yes 70312415
chr6 12232794 12232798 NFE TRANSFAC yes 99953262
chr6 12232794 12232801 MEIS1 JASPAR yes 70312416
chr6 12232794 12232801 MEIS1 JASPAR yes 99953263
chr6 12232802 12232823 IRF1 JASPAR yes 70312417
chr6 12232802 12232823 IRF1 JASPAR yes 99953264
chr6 12232804 12232819 PRDM1 JASPAR yes 70312418
chr6 12232804 12232819 STAT2 JASPAR yes 70312419
chr6 12232804 12232819 PRDM1 JASPAR yes 99953265
chr6 12232804 12232819 STAT2 JASPAR yes 99953266
chr6 12232805 12232819 STAT1 JASPAR yes 70312420
chr6 12232805 12232819 STAT1 JASPAR yes 99953267
chr6 12232806 12232818 IRF1 JASPAR yes 70312421
chr6 12232806 12232818 IRF1 JASPAR yes 99953268
chr6 12232806 12232827 ZNF263 JASPAR yes 70312422
chr6 12232806 12232827 ZNF263 JASPAR yes 99953269
chr6 12232810 12232821 FLI1 JASPAR yes 70312423
chr6 12232810 12232821 FLI1 JASPAR yes 99953270
chr6 12232811 12232815 YY1 TRANSFAC yes 70312424
chr6 12232811 12232815 YY1 TRANSFAC yes 99953271
chr6 12232811 12232821 ETV6 JASPAR yes 70312425
chr6 12232811 12232821 ETV6 JASPAR yes 99953272
chr6 12232812 12232820 FEV JASPAR yes 70312426
chr6 12232812 12232820 FEV JASPAR yes 99953273
chr6 12232814 12232821 SPIB JASPAR yes 70312427
chr6 12232814 12232821 SPIB JASPAR yes 99953274
chr6 12232835 12232853 IRF2 JASPAR yes 70312428
chr6 12232835 12232853 IRF2 JASPAR yes 99953275
chr6 12232840 12232852 IRF1 JASPAR yes 70312429
chr6 12232840 12232852 IRF1 JASPAR yes 99953276
chr6 12232840 12232854 IRF8 JASPAR yes 70312430
chr6 12232840 12232854 IRF8 JASPAR yes 99953277
chr6 12232854 12232859 ETS2 TRANSFAC yes 70312431
chr6 12232854 12232859 ETS2 TRANSFAC yes 99953278
chr6 12232862 12232875 POU2F2 JASPAR yes 70312432
chr6 12232862 12232875 POU2F2 JASPAR yes 99953279
chr6 12232876 12232886 HMBOX1 JASPAR yes 70312433
chr6 12232876 12232886 HMBOX1 JASPAR yes 99953280
chr6 12232917 12232927 BARHL2 JASPAR yes 70312434
chr6 12232917 12232927 BARHL2 JASPAR yes 99953281
SNP sites on vista50887[chr6:12232536-12232937]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12232579 rs114313524 T A
MEF2A MEF2B MEF2C MEF2D YY1
8837102
chr6 12232592 rs555707610 GT G
IRF1 STAT2
8837103
chr6 12232880 rs560748047 A G
HMBOX1 RUNX3
8837104
Genes possibly regulated by vista50887[chr6:12232536-12232937]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 42341
Expression level of Genes
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miRNAs possibly regulated by vista50887[chr6:12232536-12232937]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results