EnhancerDB
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  3. vista50888[chr6:12233796-12234233]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50888[chr6:12233796-12234233]
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Tissue distribution of vista50888
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Transcription factor that possibly regulate vista50888[chr6:12233796-12234233]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12234229 12234661 CTCF UCSC Txn Factor no Conserved 108538524
chr6 12234229 12234661 CTCF UCSC Txn Factor no Conserved 108538525
chr6 12233802 12233814 MEF2A JASPAR yes 70312435
chr6 12233802 12233814 MEF2A JASPAR yes 99953404
chr6 12233810 12233814 TEAD2 TRANSFAC yes 70312436
chr6 12233810 12233814 TEAD2 TRANSFAC yes 99953405
chr6 12233813 12233826 ZBTB18 JASPAR yes 70312437
chr6 12233813 12233826 ZBTB18 JASPAR yes 99953406
chr6 12233815 12233827 TAL1 JASPAR yes 70312438
chr6 12233815 12233827 TAL1 JASPAR yes 99953407
chr6 12233846 12233850 LFA1 TRANSFAC yes 70312439
chr6 12233846 12233850 LFA1 TRANSFAC yes 99953408
chr6 12233854 12233874 RREB1 JASPAR yes 70312440
chr6 12233854 12233874 RREB1 JASPAR yes 99953409
chr6 12233874 12233883 NFIX JASPAR yes 70312441
chr6 12233874 12233883 NFIX JASPAR yes 99953410
chr6 12233874 12233884 NFIA JASPAR yes 70312442
chr6 12233874 12233884 NFIA JASPAR yes 99953411
chr6 12233875 12233884 HIC2 JASPAR yes 70312443
chr6 12233875 12233884 HIC2 JASPAR yes 99953412
chr6 12233875 12233895 ESR1 JASPAR yes 70312444
chr6 12233875 12233895 ESR1 JASPAR yes 99953413
chr6 12233876 12233882 NFIC JASPAR yes 70312445
chr6 12233876 12233882 NFIC JASPAR yes 99953414
chr6 12233878 12233896 ESR1 JASPAR yes 70312446
chr6 12233878 12233896 ESR1 JASPAR yes 99953415
chr6 12233896 12233909 JUN JASPAR yes 70312447
chr6 12233896 12233909 JUN JASPAR yes 99953416
chr6 12233912 12233927 MEF2C JASPAR yes 70312448
chr6 12233912 12233927 MEF2C JASPAR yes 99953417
chr6 12233933 12233943 NEUROG2 JASPAR yes 70312449
chr6 12233933 12233943 NEUROG2 JASPAR yes 99953418
chr6 12233942 12233950 FOXL1 JASPAR yes 70312450
chr6 12233942 12233950 FOXL1 JASPAR yes 99953419
chr6 12233950 12233968 ESR2 JASPAR yes 70312451
chr6 12233950 12233968 ESR2 JASPAR yes 99953420
chr6 12233956 12233969 NR2F1 JASPAR yes 70312452
chr6 12233956 12233969 NR2F1 JASPAR yes 99953421
chr6 12233999 12234012 ELF1 JASPAR yes 70312453
chr6 12233999 12234012 ELF1 JASPAR yes 99953422
chr6 12234002 12234009 SPIB JASPAR yes 70312454
chr6 12234002 12234009 SPIB JASPAR yes 99953423
chr6 12234002 12234012 ETV6 JASPAR yes 70312455
chr6 12234002 12234012 GABPA JASPAR yes 70312456
chr6 12234002 12234012 ETV6 JASPAR yes 99953424
chr6 12234002 12234012 GABPA JASPAR yes 99953425
chr6 12234002 12234013 ELK4 JASPAR yes 70312457
chr6 12234002 12234013 FLI1 JASPAR yes 70312458
chr6 12234002 12234013 ELK4 JASPAR yes 99953426
chr6 12234002 12234013 FLI1 JASPAR yes 99953427
chr6 12234003 12234011 EHF JASPAR yes 70312459
chr6 12234003 12234011 EHF JASPAR yes 99953428
chr6 12234004 12234011 SPI1 JASPAR yes 70312460
chr6 12234004 12234011 SPI1 JASPAR yes 99953429
chr6 12234020 12234034 EBF1 JASPAR yes 70312461
chr6 12234020 12234034 EBF1 JASPAR yes 99953430
chr6 12234046 12234067 ZNF263 JASPAR yes 70312462
chr6 12234046 12234067 ZNF263 JASPAR yes 99953431
chr6 12234049 12234070 ZNF263 JASPAR yes 70312463
chr6 12234049 12234070 ZNF263 JASPAR yes 99953432
chr6 12234052 12234073 ZNF263 JASPAR yes 70312464
chr6 12234052 12234073 ZNF263 JASPAR yes 99953433
chr6 12234054 12234060 ETS1 JASPAR yes 70312465
chr6 12234054 12234060 SPI1 JASPAR yes 70312466
chr6 12234054 12234060 ETS1 JASPAR yes 99953434
chr6 12234054 12234060 SPI1 JASPAR yes 99953435
chr6 12234060 12234070 SP1 JASPAR yes 70312467
chr6 12234060 12234070 SP1 JASPAR yes 99953436
chr6 12234061 12234082 ZNF263 JASPAR yes 70312468
chr6 12234061 12234082 ZNF263 JASPAR yes 99953437
chr6 12234102 12234108 JUN TRANSFAC yes 70312469
chr6 12234102 12234108 JUN TRANSFAC yes 99953438
chr6 12234124 12234136 GLI2 JASPAR yes 70312470
chr6 12234124 12234136 GLI2 JASPAR yes 99953439
chr6 12234124 12234139 RUNX2 JASPAR yes 70312471
chr6 12234124 12234139 RUNX2 JASPAR yes 99953440
chr6 12234125 12234135 RUNX3 JASPAR yes 70312472
chr6 12234125 12234135 RUNX3 JASPAR yes 99953441
chr6 12234125 12234145 RREB1 JASPAR yes 70312473
chr6 12234125 12234145 RREB1 JASPAR yes 99953442
chr6 12234149 12234156 MEIS1 JASPAR yes 70312474
chr6 12234149 12234156 MEIS1 JASPAR yes 99953443
chr6 12234149 12234157 MEIS2 JASPAR yes 70312475
chr6 12234149 12234157 MEIS3 JASPAR yes 70312476
chr6 12234149 12234157 MEIS2 JASPAR yes 99953444
chr6 12234149 12234157 MEIS3 JASPAR yes 99953445
chr6 12234156 12234168 POU3F1 JASPAR yes 70312477
chr6 12234156 12234168 POU3F1 JASPAR yes 99953446
chr6 12234157 12234169 POU2F1 JASPAR yes 70312478
chr6 12234157 12234169 POU2F1 JASPAR yes 99953447
chr6 12234158 12234170 HLF JASPAR yes 70312479
chr6 12234158 12234170 HLF JASPAR yes 99953448
chr6 12234159 12234167 FOXL1 JASPAR yes 70312480
chr6 12234159 12234167 FOXL1 JASPAR yes 99953449
chr6 12234160 12234171 NFIL3 JASPAR yes 70312481
chr6 12234160 12234171 NFIL3 JASPAR yes 99953450
chr6 12234170 12234191 IRF1 JASPAR yes 70312482
chr6 12234170 12234191 IRF1 JASPAR yes 99953451
chr6 12234174 12234188 STAT1 JASPAR yes 70312483
chr6 12234174 12234188 STAT1 JASPAR yes 99953452
chr6 12234174 12234189 STAT2 JASPAR yes 70312484
chr6 12234174 12234189 STAT2 JASPAR yes 99953453
chr6 12234182 12234198 SRF JASPAR yes 70312485
chr6 12234182 12234198 SRF JASPAR yes 99953454
chr6 12234202 12234208 TCF4 TRANSFAC yes 70312486
chr6 12234202 12234208 TCF4 TRANSFAC yes 99953455
chr6 12234215 12234225 MZF1 JASPAR yes 70312487
chr6 12234215 12234225 MZF1 JASPAR yes 99953456
chr6 12234216 12234222 MZF1 JASPAR yes 70312488
chr6 12234216 12234222 MZF1 JASPAR yes 99953457
chr6 12234217 12234227 SP1 JASPAR yes 70312489
chr6 12234217 12234227 SP1 JASPAR yes 99953458
chr6 12234218 12234228 SP1 JASPAR yes 70312490
chr6 12234218 12234228 SP1 JASPAR yes 99953459
chr6 12234221 12234231 MZF1 JASPAR yes 70312491
chr6 12234221 12234231 MZF1 JASPAR yes 99953460
chr6 12234231 12234241 NFIA JASPAR yes 70312492
chr6 12234231 12234241 NFIA JASPAR yes 99953461
chr6 12234233 12234239 NFIC JASPAR yes 70312493
chr6 12234233 12234239 NFIC JASPAR yes 99953462
SNP sites on vista50888[chr6:12233796-12234233]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12233838 rs74508807 C T no 8837121
chr6 12233888 rs10947858 C T
ESR1
8837122
chr6 12234090 rs9394657 G C no 8837123
chr6 12234203 rs144345766 CT C
TCF4
8837124
Genes possibly regulated by vista50888[chr6:12233796-12234233]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 43637
Expression level of Genes
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miRNAs possibly regulated by vista50888[chr6:12233796-12234233]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results