EnhancerDB
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  3. vista50889[chr6:12234649-12234812]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50889[chr6:12234649-12234812]
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Tissue distribution of vista50889
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Transcription factor that possibly regulate vista50889[chr6:12234649-12234812]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12234229 12234661 CTCF UCSC Txn Factor no Conserved 108538524
chr6 12234229 12234661 CTCF UCSC Txn Factor no Conserved 108538525
chr6 12234653 12234661 FOXL1 JASPAR yes 70312494
chr6 12234653 12234661 FOXL1 JASPAR yes 99953503
chr6 12234673 12234682 PITX3 JASPAR yes 70312495
chr6 12234673 12234682 PITX3 JASPAR yes 99953504
chr6 12234673 12234683 GSC2 JASPAR yes 70312496
chr6 12234673 12234683 GSC JASPAR yes 70312497
chr6 12234673 12234683 GSC2 JASPAR yes 99953505
chr6 12234673 12234683 GSC JASPAR yes 99953506
chr6 12234674 12234682 OTX1 JASPAR yes 70312498
chr6 12234674 12234682 OTX2 JASPAR yes 70312499
chr6 12234674 12234682 OTX1 JASPAR yes 99953507
chr6 12234674 12234682 OTX2 JASPAR yes 99953508
chr6 12234685 12234700 RUNX2 JASPAR yes 70312500
chr6 12234685 12234700 RUNX2 JASPAR yes 99953509
chr6 12234686 12234695 RUNX2 JASPAR yes 70312501
chr6 12234686 12234695 RUNX2 JASPAR yes 99953510
chr6 12234686 12234696 RUNX3 JASPAR yes 70312502
chr6 12234686 12234696 RUNX3 JASPAR yes 99953511
chr6 12234694 12234699 ETS2 TRANSFAC yes 70312503
chr6 12234694 12234699 ETS2 TRANSFAC yes 99953512
chr6 12234726 12234747 ZNF263 JASPAR yes 70312504
chr6 12234726 12234747 ZNF263 JASPAR yes 99953513
chr6 12234735 12234745 SP1 JASPAR yes 70312505
chr6 12234735 12234745 SP1 JASPAR yes 99953514
chr6 12234737 12234742 SP1 TRANSFAC yes 70312506
chr6 12234737 12234742 SP1 TRANSFAC yes 99953515
chr6 12234742 12234750 NR4A2 JASPAR yes 70312507
chr6 12234742 12234750 NR4A2 JASPAR yes 99953516
chr6 12234743 12234760 RARA JASPAR yes 70312508
chr6 12234743 12234760 RARA JASPAR yes 99953517
chr6 12234744 12234748 ESR1 TRANSFAC yes 70312509
chr6 12234744 12234748 ESR1 TRANSFAC yes 99953518
chr6 12234745 12234757 HNF1B JASPAR yes 70312510
chr6 12234745 12234757 HNF1B JASPAR yes 99953519
chr6 12234755 12234759 H4TF2 TRANSFAC yes 70312511
chr6 12234755 12234759 H4TF2 TRANSFAC yes 99953520
SNP sites on vista50889[chr6:12234649-12234812]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12234665 rs114879320 A G no 8837129
chr6 12234810 rs6919706 C A no 8837130
Genes possibly regulated by vista50889[chr6:12234649-12234812]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 44216
Expression level of Genes
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miRNAs possibly regulated by vista50889[chr6:12234649-12234812]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results