EnhancerDB
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  3. vista50892[chr6:12265023-12265287]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50892[chr6:12265023-12265287]
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Tissue distribution of vista50892
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Transcription factor that possibly regulate vista50892[chr6:12265023-12265287]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12265003 12265024 ZNF263 JASPAR yes 70312616
chr6 12265003 12265024 ZNF263 JASPAR yes 99955753
chr6 12265039 12265058 CTCF JASPAR yes 70312617
chr6 12265039 12265058 CTCF JASPAR yes 99955756
chr6 12265039 12265060 ZNF263 JASPAR yes 70312618
chr6 12265039 12265060 ZNF263 JASPAR yes 99955757
chr6 12265040 12265044 LFA1 TRANSFAC yes 70312619
chr6 12265040 12265044 LFA1 TRANSFAC yes 99955758
chr6 12265055 12265076 IRF1 JASPAR yes 70312620
chr6 12265055 12265076 IRF1 JASPAR yes 99955759
chr6 12265058 12265072 IRF7 JASPAR yes 70312621
chr6 12265058 12265072 IRF7 JASPAR yes 99955760
chr6 12265060 12265072 IRF1 JASPAR yes 70312622
chr6 12265060 12265072 IRF1 JASPAR yes 99955761
chr6 12265066 12265080 JUN JASPAR yes 70312623
chr6 12265066 12265080 JUN JASPAR yes 99955762
chr6 12265068 12265079 BATF JASPAR yes 70312624
chr6 12265068 12265079 BATF JASPAR yes 99955763
chr6 12265069 12265080 FOSL2 JASPAR yes 70312625
chr6 12265069 12265080 JUNB JASPAR yes 70312626
chr6 12265069 12265080 FOSL2 JASPAR yes 99955764
chr6 12265069 12265080 JUNB JASPAR yes 99955765
chr6 12265070 12265081 FOS JASPAR yes 70312627
chr6 12265070 12265081 FOSL1 JASPAR yes 70312628
chr6 12265070 12265081 FOS JASPAR yes 99955766
chr6 12265070 12265081 FOSL1 JASPAR yes 99955767
chr6 12265090 12265099 THAP1 JASPAR yes 70312629
chr6 12265090 12265099 THAP1 JASPAR yes 99955768
chr6 12265095 12265103 HOXA5 JASPAR yes 70312630
chr6 12265095 12265103 HOXA5 JASPAR yes 99955769
chr6 12265106 12265122 POU4F2 JASPAR yes 70312631
chr6 12265106 12265122 POU4F3 JASPAR yes 70312632
chr6 12265106 12265122 POU4F2 JASPAR yes 99955770
chr6 12265106 12265122 POU4F3 JASPAR yes 99955771
chr6 12265108 12265122 POU4F1 JASPAR yes 70312633
chr6 12265108 12265122 POU4F1 JASPAR yes 99955772
chr6 12265109 12265123 POU4F1 JASPAR yes 70312634
chr6 12265109 12265123 POU4F1 JASPAR yes 99955773
chr6 12265112 12265128 SOX8 JASPAR yes 70312635
chr6 12265112 12265128 SOX8 JASPAR yes 99955774
chr6 12265124 12265135 HOXC13 JASPAR yes 70312636
chr6 12265124 12265135 HOXC13 JASPAR yes 99955775
chr6 12265126 12265137 STAT1 JASPAR yes 70312637
chr6 12265126 12265137 STAT1 JASPAR yes 99955776
chr6 12265144 12265157 NR2F1 JASPAR yes 70312638
chr6 12265144 12265157 NR2F1 JASPAR yes 99955777
chr6 12265148 12265152 ESR1 TRANSFAC yes 70312639
chr6 12265148 12265152 ESR1 TRANSFAC yes 99955778
chr6 12265148 12265159 USF1 JASPAR yes 70312640
chr6 12265148 12265159 USF1 JASPAR yes 99955779
chr6 12265156 12265161 H4TF1 TRANSFAC yes 70312641
chr6 12265156 12265161 H4TF1 TRANSFAC yes 99955780
chr6 12265156 12265167 CEBPB JASPAR yes 70312642
chr6 12265156 12265167 CEBPB JASPAR yes 99955781
chr6 12265161 12265171 ALX3 JASPAR yes 70312643
chr6 12265161 12265171 EN2 JASPAR yes 70312644
chr6 12265161 12265171 ESX1 JASPAR yes 70312645
chr6 12265161 12265171 GBX2 JASPAR yes 70312646
chr6 12265161 12265171 GSX1 JASPAR yes 70312647
chr6 12265161 12265171 GSX2 JASPAR yes 70312648
chr6 12265161 12265171 LBX2 JASPAR yes 70312649
chr6 12265161 12265171 LHX2 JASPAR yes 70312650
chr6 12265161 12265171 ALX3 JASPAR yes 99955782
chr6 12265161 12265171 EN2 JASPAR yes 99955783
chr6 12265161 12265171 ESX1 JASPAR yes 99955784
chr6 12265161 12265171 GBX2 JASPAR yes 99955785
chr6 12265161 12265171 GSX1 JASPAR yes 99955786
chr6 12265161 12265171 GSX2 JASPAR yes 99955787
chr6 12265161 12265171 LBX2 JASPAR yes 99955788
chr6 12265161 12265171 LHX2 JASPAR yes 99955789
chr6 12265162 12265170 BARX1 JASPAR yes 70312651
chr6 12265162 12265170 BSX JASPAR yes 70312652
chr6 12265162 12265170 DLX6 JASPAR yes 70312653
chr6 12265162 12265170 ISX JASPAR yes 70312654
chr6 12265162 12265170 LBX1 JASPAR yes 70312655
chr6 12265162 12265170 LHX9 JASPAR yes 70312656
chr6 12265162 12265170 MSX1 JASPAR yes 70312657
chr6 12265162 12265170 MSX2 JASPAR yes 70312658
chr6 12265162 12265170 NKX6-2 JASPAR yes 70312659
chr6 12265162 12265170 PRRX1 JASPAR yes 70312660
chr6 12265162 12265170 RAX2 JASPAR yes 70312661
chr6 12265162 12265170 SHOX JASPAR yes 70312662
chr6 12265162 12265170 UNCX JASPAR yes 70312663
chr6 12265162 12265170 BARX1 JASPAR yes 99955790
chr6 12265162 12265170 BSX JASPAR yes 99955791
chr6 12265162 12265170 DLX6 JASPAR yes 99955792
chr6 12265162 12265170 ISX JASPAR yes 99955793
chr6 12265162 12265170 LBX1 JASPAR yes 99955794
chr6 12265162 12265170 LHX9 JASPAR yes 99955795
chr6 12265162 12265170 MSX1 JASPAR yes 99955796
chr6 12265162 12265170 MSX2 JASPAR yes 99955797
chr6 12265162 12265170 NKX6-2 JASPAR yes 99955798
chr6 12265162 12265170 PRRX1 JASPAR yes 99955799
chr6 12265162 12265170 RAX2 JASPAR yes 99955800
chr6 12265162 12265170 SHOX JASPAR yes 99955801
chr6 12265162 12265170 UNCX JASPAR yes 99955802
chr6 12265167 12265172 TFAP2A TRANSFAC yes 70312664
chr6 12265167 12265172 TFAP2A TRANSFAC yes 99955803
chr6 12265167 12265173 MZF1 JASPAR yes 70312665
chr6 12265167 12265173 MZF1 JASPAR yes 99955804
chr6 12265168 12265178 NFKB1 JASPAR yes 70312666
chr6 12265168 12265178 NFKB1 JASPAR yes 99955805
chr6 12265171 12265176 H4TF1 TRANSFAC yes 70312667
chr6 12265171 12265176 H4TF1 TRANSFAC yes 99955806
chr6 12265176 12265186 HOXA13 JASPAR yes 70312668
chr6 12265176 12265186 HOXC10 JASPAR yes 70312669
chr6 12265176 12265186 HOXD13 JASPAR yes 70312670
chr6 12265176 12265186 HOXA13 JASPAR yes 99955807
chr6 12265176 12265186 HOXC10 JASPAR yes 99955808
chr6 12265176 12265186 HOXD13 JASPAR yes 99955809
chr6 12265176 12265187 HOXC11 JASPAR yes 70312671
chr6 12265176 12265187 HOXC12 JASPAR yes 70312672
chr6 12265176 12265187 HOXC13 JASPAR yes 70312673
chr6 12265176 12265187 HOXD12 JASPAR yes 70312674
chr6 12265176 12265187 HOXC11 JASPAR yes 99955810
chr6 12265176 12265187 HOXC12 JASPAR yes 99955811
chr6 12265176 12265187 HOXC13 JASPAR yes 99955812
chr6 12265176 12265187 HOXD12 JASPAR yes 99955813
chr6 12265177 12265186 CDX1 JASPAR yes 70312675
chr6 12265177 12265186 CDX1 JASPAR yes 99955814
chr6 12265177 12265188 CDX2 JASPAR yes 70312676
chr6 12265177 12265188 CDX2 JASPAR yes 99955815
chr6 12265189 12265194 GATA2 JASPAR yes 70312677
chr6 12265189 12265194 GATA2 JASPAR yes 99955816
chr6 12265192 12265213 ZNF263 JASPAR yes 70312678
chr6 12265192 12265213 ZNF263 JASPAR yes 99955817
chr6 12265198 12265204 TCF4 TRANSFAC yes 70312679
chr6 12265198 12265204 TCF4 TRANSFAC yes 99955818
chr6 12265204 12265215 E2F6 JASPAR yes 70312680
chr6 12265204 12265215 E2F6 JASPAR yes 99955819
chr6 12265215 12265219 YY1 TRANSFAC yes 70312681
chr6 12265215 12265219 YY1 TRANSFAC yes 99955820
chr6 12265219 12265223 YY1 TRANSFAC yes 70312682
chr6 12265219 12265223 YY1 TRANSFAC yes 99955821
chr6 12265235 12265252 ZNF410 JASPAR yes 70312683
chr6 12265235 12265252 ZNF410 JASPAR yes 99955822
chr6 12265239 12265253 TCF7L2 JASPAR yes 70312684
chr6 12265239 12265253 TCF7L2 JASPAR yes 99955823
chr6 12265239 12265254 LEF1 JASPAR yes 70312685
chr6 12265239 12265254 LEF1 JASPAR yes 99955824
chr6 12265248 12265263 HNF4G JASPAR yes 70312686
chr6 12265248 12265263 HNF4G JASPAR yes 99955825
chr6 12265265 12265275 BARHL2 JASPAR yes 70312687
chr6 12265265 12265275 BARHL2 JASPAR yes 99955826
chr6 12265267 12265271 YY1 TRANSFAC yes 70312688
chr6 12265267 12265271 YY1 TRANSFAC yes 99955827
chr6 12265271 12265284 ZBTB18 JASPAR yes 70312689
chr6 12265271 12265284 ZBTB18 JASPAR yes 99955828
chr6 12265280 12265290 NKX2-3 JASPAR yes 70312690
chr6 12265280 12265290 NKX2-3 JASPAR yes 99955829
chr6 12265281 12265289 ISL2 JASPAR yes 70312691
chr6 12265281 12265289 ISL2 JASPAR yes 99955830
chr6 12265281 12265290 NKX3-2 JASPAR yes 70312692
chr6 12265281 12265290 NKX3-2 JASPAR yes 99955831
SNP sites on vista50892[chr6:12265023-12265287]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12265103 rs147741600 T G
HOXA5
8837319
chr6 12265184 rs541246780 G A
CDX1 CDX2 HOXA13 HOXC10 HOXC11 HOXC12 HOXC13 HOXD12 HOXD13
8837320
chr6 12265217 rs73722756 A G
YY1
8837321
chr6 12265246 rs560810486 A G
LEF1 TCF7L2 ZNF410
8837322
chr6 12265249 rs142003392 A G
HNF4G LEF1 TCF7L2 ZNF410
8837323
chr6 12265279 rs9462624 A T
ZBTB18
8837324
chr6 12265286 rs368086989 G C
ISL2 NKX2-3 NKX3-2
8837325
Genes possibly regulated by vista50892[chr6:12265023-12265287]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 74691
Expression level of Genes
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miRNAs possibly regulated by vista50892[chr6:12265023-12265287]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results