EnhancerDB
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  3. vista50894[chr6:12266931-12267079]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50894[chr6:12266931-12267079]
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Tissue distribution of vista50894
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Transcription factor that possibly regulate vista50894[chr6:12266931-12267079]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12266951 12266965 MTF1 JASPAR yes 70312860
chr6 12266951 12266965 MTF1 JASPAR yes 99956077
chr6 12266967 12266971 YY1 TRANSFAC yes 70312861
chr6 12266967 12266971 YY1 TRANSFAC yes 99956078
chr6 12267000 12267014 JUN JASPAR yes 70312862
chr6 12267000 12267014 JUN JASPAR yes 99956079
chr6 12267002 12267013 BATF JASPAR yes 70312863
chr6 12267002 12267013 BATF JASPAR yes 99956080
chr6 12267003 12267014 FOSL2 JASPAR yes 70312864
chr6 12267003 12267014 JUNB JASPAR yes 70312865
chr6 12267003 12267014 FOSL2 JASPAR yes 99956081
chr6 12267003 12267014 JUNB JASPAR yes 99956082
chr6 12267004 12267015 FOS JASPAR yes 70312866
chr6 12267004 12267015 FOSL1 JASPAR yes 70312867
chr6 12267004 12267015 JUND JASPAR yes 70312868
chr6 12267004 12267015 NFE2 JASPAR yes 70312869
chr6 12267004 12267015 FOS JASPAR yes 99956083
chr6 12267004 12267015 FOSL1 JASPAR yes 99956084
chr6 12267004 12267015 JUND JASPAR yes 99956085
chr6 12267004 12267015 NFE2 JASPAR yes 99956086
chr6 12267005 12267014 JDP2 JASPAR yes 70312870
chr6 12267005 12267014 JDP2 JASPAR yes 99956087
chr6 12267005 12267016 FOSL2 JASPAR yes 70312871
chr6 12267005 12267016 JUNB JASPAR yes 70312872
chr6 12267005 12267016 FOSL2 JASPAR yes 99956088
chr6 12267005 12267016 JUNB JASPAR yes 99956089
chr6 12267005 12267019 JUN JASPAR yes 70312873
chr6 12267005 12267019 JUN JASPAR yes 99956090
chr6 12267006 12267017 BATF JASPAR yes 70312874
chr6 12267006 12267017 BATF JASPAR yes 99956091
chr6 12267018 12267033 RUNX2 JASPAR yes 70312875
chr6 12267018 12267033 RUNX2 JASPAR yes 99956092
chr6 12267019 12267028 RUNX2 JASPAR yes 70312876
chr6 12267019 12267028 RUNX2 JASPAR yes 99956093
chr6 12267019 12267029 RUNX3 JASPAR yes 70312877
chr6 12267019 12267029 RUNX3 JASPAR yes 99956094
chr6 12267019 12267030 RUNX1 JASPAR yes 70312878
chr6 12267019 12267030 RUNX1 JASPAR yes 99956095
chr6 12267024 12267034 GABPA JASPAR yes 70312879
chr6 12267024 12267034 GABPA JASPAR yes 99956096
chr6 12267024 12267035 FLI1 JASPAR yes 70312880
chr6 12267024 12267035 FLI1 JASPAR yes 99956097
chr6 12267025 12267033 EHF JASPAR yes 70312881
chr6 12267025 12267033 EHF JASPAR yes 99956098
chr6 12267028 12267044 ZNF143 JASPAR yes 70312882
chr6 12267028 12267044 ZNF143 JASPAR yes 99956099
SNP sites on vista50894[chr6:12266931-12267079]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12266979 rs572085120 T C no 8837351
chr6 12266981 rs541005005 C T no 8837352
chr6 12266982 rs554296102 A G no 8837353
chr6 12267013 rs373203910 AT A
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
8837354
chr6 12267013 rs548225458 AT A
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
8837355
chr6 12267020 rs187632585 A G
RUNX1 RUNX2 RUNX3
8837356
Genes possibly regulated by vista50894[chr6:12266931-12267079]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 76483
Expression level of Genes
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miRNAs possibly regulated by vista50894[chr6:12266931-12267079]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results