EnhancerDB
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  3. vista50896[chr6:12275390-12275636]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50896[chr6:12275390-12275636]
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Tissue distribution of vista50896
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Transcription factor that possibly regulate vista50896[chr6:12275390-12275636]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12275384 12275664 JUND UCSC Txn Factor no Conserved 108538526
chr6 12275458 12275570 USF2 UCSC Txn Factor no Conserved 108538527
chr6 12275495 12275688 GATA3 UCSC Txn Factor no Conserved 108538528
chr6 12275386 12275401 ZIC4 JASPAR yes 70312907
chr6 12275386 12275401 ZIC4 JASPAR yes 99956766
chr6 12275390 12275402 ZBTB7B JASPAR yes 70312908
chr6 12275390 12275402 ZBTB7B JASPAR yes 99956767
chr6 12275396 12275400 H4TF2 TRANSFAC yes 70312909
chr6 12275396 12275400 H4TF2 TRANSFAC yes 99956768
chr6 12275413 12275424 HOXC13 JASPAR yes 70312910
chr6 12275413 12275424 HOXC13 JASPAR yes 99956769
chr6 12275426 12275430 NFE TRANSFAC yes 70312911
chr6 12275426 12275430 NFE TRANSFAC yes 99956770
chr6 12275437 12275456 CTCF JASPAR yes 70312912
chr6 12275437 12275456 CTCF JASPAR yes 99956771
chr6 12275446 12275451 MYC TRANSFAC yes 70312913
chr6 12275446 12275451 MYC TRANSFAC yes 99956772
chr6 12275454 12275465 TFAP2A JASPAR yes 70312914
chr6 12275454 12275465 TFAP2C JASPAR yes 70312915
chr6 12275454 12275465 TFAP2A JASPAR yes 99956773
chr6 12275454 12275465 TFAP2C JASPAR yes 99956774
chr6 12275459 12275470 NFKB1 JASPAR yes 70312916
chr6 12275459 12275470 NFKB1 JASPAR yes 99956775
chr6 12275480 12275491 ELF5 JASPAR yes 70312917
chr6 12275480 12275491 ELF5 JASPAR yes 99956776
chr6 12275483 12275488 ETS2 TRANSFAC yes 70312918
chr6 12275483 12275488 ETS2 TRANSFAC yes 99956777
chr6 12275490 12275500 MAX JASPAR yes 70312919
chr6 12275490 12275500 MAX JASPAR yes 99956778
chr6 12275490 12275501 USF1 JASPAR yes 70312920
chr6 12275490 12275501 USF2 JASPAR yes 70312921
chr6 12275490 12275501 USF1 JASPAR yes 99956779
chr6 12275490 12275501 USF2 JASPAR yes 99956780
chr6 12275504 12275522 NR3C1 JASPAR yes 70312922
chr6 12275504 12275522 NR3C1 JASPAR yes 99956781
chr6 12275514 12275518 NFE TRANSFAC yes 70312923
chr6 12275514 12275518 NFE TRANSFAC yes 99956782
chr6 12275517 12275531 JUN JASPAR yes 70312924
chr6 12275517 12275531 JUN JASPAR yes 99956783
chr6 12275519 12275530 BATF JASPAR yes 70312925
chr6 12275519 12275530 BATF JASPAR yes 99956784
chr6 12275520 12275531 FOSL2 JASPAR yes 70312926
chr6 12275520 12275531 JUNB JASPAR yes 70312927
chr6 12275520 12275531 FOSL2 JASPAR yes 99956785
chr6 12275520 12275531 JUNB JASPAR yes 99956786
chr6 12275521 12275532 FOS JASPAR yes 70312928
chr6 12275521 12275532 FOSL1 JASPAR yes 70312929
chr6 12275521 12275532 JUND JASPAR yes 70312930
chr6 12275521 12275532 NFE2 JASPAR yes 70312931
chr6 12275521 12275532 FOS JASPAR yes 99956787
chr6 12275521 12275532 FOSL1 JASPAR yes 99956788
chr6 12275521 12275532 JUND JASPAR yes 99956789
chr6 12275521 12275532 NFE2 JASPAR yes 99956790
chr6 12275522 12275531 JDP2 JASPAR yes 70312932
chr6 12275522 12275531 JDP2 JASPAR yes 99956791
chr6 12275522 12275533 FOSL2 JASPAR yes 70312933
chr6 12275522 12275533 JUNB JASPAR yes 70312934
chr6 12275522 12275533 FOSL2 JASPAR yes 99956792
chr6 12275522 12275533 JUNB JASPAR yes 99956793
chr6 12275522 12275536 JUN JASPAR yes 70312935
chr6 12275522 12275536 JUN JASPAR yes 99956794
chr6 12275523 12275534 BATF JASPAR yes 70312936
chr6 12275523 12275534 BATF JASPAR yes 99956795
chr6 12275525 12275540 MEF2C JASPAR yes 70312937
chr6 12275525 12275540 MEF2C JASPAR yes 99956796
chr6 12275528 12275532 YY1 TRANSFAC yes 70312938
chr6 12275528 12275532 YY1 TRANSFAC yes 99956797
chr6 12275551 12275563 HNF1B JASPAR yes 70312939
chr6 12275551 12275563 HNF1B JASPAR yes 99956798
chr6 12275559 12275580 ZNF263 JASPAR yes 70312940
chr6 12275559 12275580 ZNF263 JASPAR yes 99956799
chr6 12275560 12275581 ZNF263 JASPAR yes 70312941
chr6 12275560 12275581 ZNF263 JASPAR yes 99956800
chr6 12275613 12275620 E2F1 TRANSFAC yes 70312942
chr6 12275613 12275620 E2F1 TRANSFAC yes 99956801
chr6 12275630 12275634 YY1 TRANSFAC yes 70312943
chr6 12275630 12275634 YY1 TRANSFAC yes 99956802
chr6 12275636 12275642 TCF4 TRANSFAC yes 70312944
chr6 12275636 12275642 TCF4 TRANSFAC yes 99956803
SNP sites on vista50896[chr6:12275390-12275636]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12275435 rs529518830 C T
JUND
8837411
Genes possibly regulated by vista50896[chr6:12275390-12275636]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 85040
Expression level of Genes
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miRNAs possibly regulated by vista50896[chr6:12275390-12275636]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results