EnhancerDB
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  3. vista50897[chr6:12277553-12277959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50897[chr6:12277553-12277959]
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Tissue distribution of vista50897
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Transcription factor that possibly regulate vista50897[chr6:12277553-12277959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12277556 12277567 HOXA10 JASPAR yes 70312945
chr6 12277556 12277567 HOXA10 JASPAR yes 99957247
chr6 12277559 12277573 ONECUT3 JASPAR yes 70312946
chr6 12277559 12277573 ONECUT3 JASPAR yes 99957248
chr6 12277561 12277570 SRY JASPAR yes 70312947
chr6 12277561 12277570 SRY JASPAR yes 99957249
chr6 12277563 12277572 SOX9 JASPAR yes 70312948
chr6 12277563 12277572 SOX9 JASPAR yes 99957250
chr6 12277576 12277580 YY1 TRANSFAC yes 70312949
chr6 12277576 12277580 YY1 TRANSFAC yes 99957251
chr6 12277629 12277644 JUND JASPAR yes 70312950
chr6 12277629 12277644 JUND JASPAR yes 99957252
chr6 12277631 12277638 JUN TRANSFAC yes 70312951
chr6 12277631 12277638 JUN TRANSFAC yes 99957253
chr6 12277637 12277641 YY1 TRANSFAC yes 70312952
chr6 12277637 12277641 YY1 TRANSFAC yes 99957254
chr6 12277640 12277652 HNF1B JASPAR yes 70312953
chr6 12277640 12277652 HNF1B JASPAR yes 99957255
chr6 12277643 12277650 NKX3-1 JASPAR yes 70312954
chr6 12277643 12277650 NKX3-1 JASPAR yes 99957256
chr6 12277646 12277655 SRY JASPAR yes 70312955
chr6 12277646 12277655 SRY JASPAR yes 99957257
chr6 12277646 12277666 TBX19 JASPAR yes 70312956
chr6 12277646 12277666 TBX19 JASPAR yes 99957258
chr6 12277648 12277651 MYB TRANSFAC yes 70312957
chr6 12277648 12277651 MYB TRANSFAC yes 99957259
chr6 12277648 12277664 T JASPAR yes 70312958
chr6 12277648 12277664 T JASPAR yes 99957260
chr6 12277649 12277665 SOX8 JASPAR yes 70312959
chr6 12277649 12277665 SOX8 JASPAR yes 99957261
chr6 12277651 12277665 PAX6 JASPAR yes 70312960
chr6 12277651 12277665 PAX6 JASPAR yes 99957262
chr6 12277661 12277672 NFIL3 JASPAR yes 70312961
chr6 12277661 12277672 NFIL3 JASPAR yes 99957263
chr6 12277666 12277673 NKX3-1 JASPAR yes 70312962
chr6 12277666 12277673 NKX3-1 JASPAR yes 99957264
chr6 12277684 12277688 YY1 TRANSFAC yes 70312963
chr6 12277684 12277688 YY1 TRANSFAC yes 99957265
chr6 12277691 12277704 JUN JASPAR yes 70312964
chr6 12277691 12277704 JUN JASPAR yes 99957266
chr6 12277694 12277715 IRF1 JASPAR yes 70312965
chr6 12277694 12277715 IRF1 JASPAR yes 99957267
chr6 12277696 12277704 FEV JASPAR yes 70312966
chr6 12277696 12277704 FEV JASPAR yes 99957268
chr6 12277698 12277712 STAT1 JASPAR yes 70312967
chr6 12277698 12277712 STAT1 JASPAR yes 99957269
chr6 12277698 12277713 STAT2 JASPAR yes 70312968
chr6 12277698 12277713 STAT2 JASPAR yes 99957270
chr6 12277700 12277721 IRF1 JASPAR yes 70312969
chr6 12277700 12277721 IRF1 JASPAR yes 99957271
chr6 12277701 12277711 NFATC3 JASPAR yes 70312970
chr6 12277701 12277711 NFATC3 JASPAR yes 99957272
chr6 12277702 12277717 IRF9 JASPAR yes 70312971
chr6 12277702 12277717 IRF9 JASPAR yes 99957273
chr6 12277703 12277711 FOXO3 JASPAR yes 70312972
chr6 12277703 12277711 FOXO3 JASPAR yes 99957274
chr6 12277703 12277717 IRF8 JASPAR yes 70312973
chr6 12277703 12277717 IRF8 JASPAR yes 99957275
chr6 12277704 12277719 STAT2 JASPAR yes 70312974
chr6 12277704 12277719 STAT2 JASPAR yes 99957276
chr6 12277704 12277722 IRF2 JASPAR yes 70312975
chr6 12277704 12277722 IRF2 JASPAR yes 99957277
chr6 12277715 12277720 GATA2 JASPAR yes 70312976
chr6 12277715 12277720 GATA2 JASPAR yes 99957278
chr6 12277730 12277741 ESRRB JASPAR yes 70312977
chr6 12277730 12277741 ESRRB JASPAR yes 99957279
chr6 12277734 12277745 CEBPB JASPAR yes 70312978
chr6 12277734 12277745 CEBPB JASPAR yes 99957280
chr6 12277734 12277746 DBP JASPAR yes 70312979
chr6 12277734 12277746 HLF JASPAR yes 70312980
chr6 12277734 12277746 TEF JASPAR yes 70312981
chr6 12277734 12277746 DBP JASPAR yes 99957281
chr6 12277734 12277746 HLF JASPAR yes 99957282
chr6 12277734 12277746 TEF JASPAR yes 99957283
chr6 12277735 12277745 CEBPB JASPAR yes 70312982
chr6 12277735 12277745 CEBPD JASPAR yes 70312983
chr6 12277735 12277745 CEBPE JASPAR yes 70312984
chr6 12277735 12277745 CEBPG JASPAR yes 70312985
chr6 12277735 12277745 CEBPB JASPAR yes 99957284
chr6 12277735 12277745 CEBPD JASPAR yes 99957285
chr6 12277735 12277745 CEBPE JASPAR yes 99957286
chr6 12277735 12277745 CEBPG JASPAR yes 99957287
chr6 12277735 12277746 CEBPA JASPAR yes 70312986
chr6 12277735 12277746 CEBPA JASPAR yes 99957288
chr6 12277740 12277748 BARX1 JASPAR yes 70312987
chr6 12277740 12277748 BARX1 JASPAR yes 99957289
chr6 12277774 12277781 TBP TRANSFAC yes 70312988
chr6 12277774 12277781 TFIID TRANSFAC yes 70312989
chr6 12277774 12277781 TBP TRANSFAC yes 99957290
chr6 12277774 12277781 TFIID TRANSFAC yes 99957291
chr6 12277794 12277803 SRY JASPAR yes 70312990
chr6 12277794 12277803 SRY JASPAR yes 99957292
chr6 12277796 12277805 SOX9 JASPAR yes 70312991
chr6 12277796 12277805 SOX9 JASPAR yes 99957293
chr6 12277803 12277808 GATA2 JASPAR yes 70312992
chr6 12277803 12277808 GATA2 JASPAR yes 99957294
chr6 12277810 12277822 HNF1B JASPAR yes 70312993
chr6 12277810 12277822 HNF1B JASPAR yes 99957295
chr6 12277822 12277827 GATA1 TRANSFAC yes 70312994
chr6 12277822 12277827 GATA1 TRANSFAC yes 99957296
chr6 12277856 12277867 STAT1 JASPAR yes 70312995
chr6 12277856 12277867 STAT1 JASPAR yes 99957297
chr6 12277856 12277871 HSF1 JASPAR yes 70312996
chr6 12277856 12277871 HSF1 JASPAR yes 99957298
chr6 12277861 12277871 NFKB1 JASPAR yes 70312997
chr6 12277861 12277871 RELA JASPAR yes 70312998
chr6 12277861 12277871 REL JASPAR yes 70312999
chr6 12277861 12277871 NFKB1 JASPAR yes 99957299
chr6 12277861 12277871 RELA JASPAR yes 99957300
chr6 12277861 12277871 REL JASPAR yes 99957301
chr6 12277861 12277872 NFKB1 JASPAR yes 70313000
chr6 12277861 12277872 NFKB1 JASPAR yes 99957302
chr6 12277861 12277877 SOX4 JASPAR yes 70313001
chr6 12277861 12277877 SOX4 JASPAR yes 99957303
chr6 12277862 12277872 RELA JASPAR yes 70313002
chr6 12277862 12277872 REL JASPAR yes 70313003
chr6 12277862 12277872 RELA JASPAR yes 99957304
chr6 12277862 12277872 REL JASPAR yes 99957305
chr6 12277862 12277877 SOX21 JASPAR yes 70313004
chr6 12277862 12277877 SOX21 JASPAR yes 99957306
chr6 12277886 12277899 ELF1 JASPAR yes 70313005
chr6 12277886 12277899 ELF1 JASPAR yes 99957307
chr6 12277889 12277896 SPIB JASPAR yes 70313006
chr6 12277889 12277896 SPIB JASPAR yes 99957308
chr6 12277889 12277899 GABPA JASPAR yes 70313007
chr6 12277889 12277899 GABPA JASPAR yes 99957309
chr6 12277908 12277918 OLIG2 JASPAR yes 70313008
chr6 12277908 12277918 OLIG3 JASPAR yes 70313009
chr6 12277908 12277918 OLIG2 JASPAR yes 99957310
chr6 12277908 12277918 OLIG3 JASPAR yes 99957311
chr6 12277914 12277926 PKNOX1 JASPAR yes 70313010
chr6 12277914 12277926 TGIF2 JASPAR yes 70313011
chr6 12277914 12277926 PKNOX1 JASPAR yes 99957312
chr6 12277914 12277926 TGIF2 JASPAR yes 99957313
chr6 12277918 12277931 SMAD2 JASPAR yes 70313012
chr6 12277918 12277931 SMAD2 JASPAR yes 99957314
SNP sites on vista50897[chr6:12277553-12277959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12277598 rs115061992 G A,T no 8837441
chr6 12277622 rs6931867 C T no 8837442
chr6 12277729 rs547929797 G T no 8837443
Genes possibly regulated by vista50897[chr6:12277553-12277959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 87363
Expression level of Genes
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miRNAs possibly regulated by vista50897[chr6:12277553-12277959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results