EnhancerDB
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  3. vista50902[chr6:12291396-12291672]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50902[chr6:12291396-12291672]
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Tissue distribution of vista50902
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Transcription factor that possibly regulate vista50902[chr6:12291396-12291672]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12291412 12291417 USF2 TRANSFAC yes 70313270
chr6 12291438 12291441 MYB TRANSFAC yes 70313271
chr6 12291445 12291455 SP1 JASPAR yes 70313272
chr6 12291447 12291468 ZNF263 JASPAR yes 70313273
chr6 12291448 12291458 SP1 JASPAR yes 70313274
chr6 12291448 12291458 ZNF740 JASPAR yes 70313275
chr6 12291449 12291459 SP1 JASPAR yes 70313276
chr6 12291449 12291459 ZNF740 JASPAR yes 70313277
chr6 12291449 12291469 RREB1 JASPAR yes 70313278
chr6 12291450 12291460 SP1 JASPAR yes 70313279
chr6 12291450 12291460 ZNF740 JASPAR yes 70313280
chr6 12291450 12291470 RREB1 JASPAR yes 70313281
chr6 12291450 12291471 ZNF263 JASPAR yes 70313282
chr6 12291451 12291461 SP1 JASPAR yes 70313283
chr6 12291451 12291461 ZNF740 JASPAR yes 70313284
chr6 12291451 12291471 RREB1 JASPAR yes 70313285
chr6 12291452 12291462 SP1 JASPAR yes 70313286
chr6 12291452 12291462 ZNF740 JASPAR yes 70313287
chr6 12291452 12291472 RREB1 JASPAR yes 70313288
chr6 12291453 12291463 SP1 JASPAR yes 70313289
chr6 12291453 12291463 ZNF740 JASPAR yes 70313290
chr6 12291453 12291473 RREB1 JASPAR yes 70313291
chr6 12291453 12291474 ZNF263 JASPAR yes 70313292
chr6 12291454 12291464 ZNF740 JASPAR yes 70313293
chr6 12291454 12291468 GLIS2 JASPAR yes 70313294
chr6 12291455 12291465 SP1 JASPAR yes 70313295
chr6 12291455 12291475 RREB1 JASPAR yes 70313296
chr6 12291456 12291476 RREB1 JASPAR yes 70313297
chr6 12291458 12291464 SP1 TRANSFAC yes 70313298
chr6 12291459 12291479 RREB1 JASPAR yes 70313299
chr6 12291464 12291483 CTCF JASPAR yes 70313300
chr6 12291465 12291475 SP1 JASPAR yes 70313301
chr6 12291467 12291481 GLIS2 JASPAR yes 70313302
chr6 12291467 12291481 ZIC1 JASPAR yes 70313303
chr6 12291467 12291482 ZIC4 JASPAR yes 70313304
chr6 12291469 12291482 TFAP2B JASPAR yes 70313305
chr6 12291470 12291482 TFAP2A JASPAR yes 70313306
chr6 12291471 12291482 TFAP2A JASPAR yes 70313307
chr6 12291471 12291482 TFAP2B JASPAR yes 70313308
chr6 12291471 12291485 ZIC1 JASPAR yes 70313309
chr6 12291477 12291482 SP1 TRANSFAC yes 70313310
chr6 12291492 12291505 ZBTB18 JASPAR yes 70313311
chr6 12291494 12291506 TAL1 JASPAR yes 70313312
chr6 12291498 12291510 FOXC2 JASPAR yes 70313313
chr6 12291499 12291510 FOXC1 JASPAR yes 70313314
chr6 12291500 12291511 FOXA1 JASPAR yes 70313315
chr6 12291527 12291541 IRF7 JASPAR yes 70313316
chr6 12291527 12291541 IRF8 JASPAR yes 70313317
chr6 12291527 12291542 IRF9 JASPAR yes 70313318
chr6 12291541 12291547 NFIC JASPAR yes 70313319
chr6 12291550 12291560 NFIA JASPAR yes 70313320
chr6 12291551 12291560 NFIX JASPAR yes 70313321
chr6 12291552 12291558 NFIC JASPAR yes 70313322
chr6 12291552 12291571 REST JASPAR yes 70313323
chr6 12291590 12291599 ZEB1 JASPAR yes 70313324
chr6 12291593 12291598 USF2 TRANSFAC yes 70313325
chr6 12291601 12291611 SP1 JASPAR yes 70313326
chr6 12291603 12291609 MAZ TRANSFAC yes 70313327
chr6 12291616 12291621 GATA2 JASPAR yes 70313328
chr6 12291667 12291671 H4TF2 TRANSFAC yes 70313329
SNP sites on vista50902[chr6:12291396-12291672]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12291450 rs543194624 TCC T
RREB1 SP1 ZNF263 ZNF740
8837554
chr6 12291450 rs56214323 TCC T
RREB1 SP1 ZNF263 ZNF740
8837555
chr6 12291450 rs762815492 TCC T
RREB1 SP1 ZNF263 ZNF740
8837556
chr6 12291460 rs548079459 C A,G
GLIS2 RREB1 SP1 ZNF263 ZNF740
8837557
Genes possibly regulated by vista50902[chr6:12291396-12291672]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 99200
Expression level of Genes
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miRNAs possibly regulated by vista50902[chr6:12291396-12291672]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results