EnhancerDB
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  3. vista50906[chr6:12332214-12332482]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50906[chr6:12332214-12332482]
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Tissue distribution of vista50906
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Transcription factor that possibly regulate vista50906[chr6:12332214-12332482]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12332094 12332670 EP300 UCSC Txn Factor no Conserved 108538538
chr6 12332128 12332649 TCF12 UCSC Txn Factor no Conserved 108538539
chr6 12332163 12332633 GATA3 UCSC Txn Factor no Conserved 108538540
chr6 12332195 12332475 FOXA1 UCSC Txn Factor no Conserved 108538541
chr6 12332283 12332547 CEBPB UCSC Txn Factor no Conserved 108538542
chr6 12332204 12332219 LEF1 JASPAR yes 70313490
chr6 12332204 12332219 LEF1 JASPAR yes 99961785
chr6 12332218 12332221 MYB TRANSFAC yes 70313491
chr6 12332218 12332221 MYB TRANSFAC yes 99961786
chr6 12332220 12332235 PRDM1 JASPAR yes 70313492
chr6 12332220 12332235 PRDM1 JASPAR yes 99961787
chr6 12332236 12332250 GATA2 JASPAR yes 70313493
chr6 12332236 12332250 GATA2 JASPAR yes 99961788
chr6 12332240 12332248 GATA3 JASPAR yes 70313494
chr6 12332240 12332248 GATA3 JASPAR yes 99961789
chr6 12332250 12332254 NFE TRANSFAC yes 70313495
chr6 12332250 12332254 NFE TRANSFAC yes 99961790
chr6 12332252 12332273 ZNF263 JASPAR yes 70313496
chr6 12332252 12332273 ZNF263 JASPAR yes 99961791
chr6 12332261 12332265 YY1 TRANSFAC yes 70313497
chr6 12332261 12332265 YY1 TRANSFAC yes 99961792
chr6 12332265 12332270 GATA2 JASPAR yes 70313498
chr6 12332265 12332270 GATA2 JASPAR yes 99961793
chr6 12332304 12332325 REST JASPAR yes 70313499
chr6 12332304 12332325 REST JASPAR yes 99961794
chr6 12332305 12332324 REST JASPAR yes 70313500
chr6 12332305 12332324 REST JASPAR yes 99961795
chr6 12332322 12332332 NFIA JASPAR yes 70313501
chr6 12332322 12332332 NFIA JASPAR yes 99961796
chr6 12332323 12332334 FOXA1 JASPAR yes 70313502
chr6 12332323 12332334 FOXA1 JASPAR yes 99961797
chr6 12332324 12332330 NFIC JASPAR yes 70313503
chr6 12332324 12332330 NFIC JASPAR yes 99961798
chr6 12332343 12332355 FOXI1 JASPAR yes 70313504
chr6 12332343 12332355 FOXI1 JASPAR yes 99961799
chr6 12332345 12332361 POU4F2 JASPAR yes 70313505
chr6 12332345 12332361 POU4F2 JASPAR yes 99961800
chr6 12332350 12332354 YY1 TRANSFAC yes 70313506
chr6 12332350 12332354 YY1 TRANSFAC yes 99961801
chr6 12332357 12332363 JUN TRANSFAC yes 70313507
chr6 12332357 12332363 JUN TRANSFAC yes 99961802
chr6 12332385 12332400 JUND JASPAR yes 70313508
chr6 12332385 12332400 JUND JASPAR yes 99961803
chr6 12332386 12332399 JUN JASPAR yes 70313509
chr6 12332386 12332399 JUN JASPAR yes 99961804
chr6 12332387 12332401 ATF7 JASPAR yes 70313510
chr6 12332387 12332401 BATF3 JASPAR yes 70313511
chr6 12332387 12332401 ATF7 JASPAR yes 99961805
chr6 12332387 12332401 BATF3 JASPAR yes 99961806
chr6 12332388 12332400 JDP2 JASPAR yes 70313512
chr6 12332388 12332400 JDP2 JASPAR yes 99961807
chr6 12332388 12332403 JUND JASPAR yes 70313513
chr6 12332388 12332403 JUND JASPAR yes 99961808
chr6 12332394 12332404 SREBF1 JASPAR yes 70313514
chr6 12332394 12332404 SREBF2 JASPAR yes 70313515
chr6 12332394 12332404 SREBF1 JASPAR yes 99961809
chr6 12332394 12332404 SREBF2 JASPAR yes 99961810
chr6 12332431 12332446 HSF1 JASPAR yes 70313516
chr6 12332431 12332446 HSF1 JASPAR yes 99961811
chr6 12332432 12332445 HSF2 JASPAR yes 70313517
chr6 12332432 12332445 HSF2 JASPAR yes 99961812
chr6 12332456 12332468 TFAP2B JASPAR yes 70313518
chr6 12332456 12332468 TFAP2C JASPAR yes 70313519
chr6 12332456 12332468 TFAP2B JASPAR yes 99961813
chr6 12332456 12332468 TFAP2C JASPAR yes 99961814
chr6 12332462 12332472 SP1 JASPAR yes 70313520
chr6 12332462 12332472 SP1 JASPAR yes 99961815
chr6 12332463 12332467 LFA1 TRANSFAC yes 70313521
chr6 12332463 12332467 LFA1 TRANSFAC yes 99961816
chr6 12332474 12332478 NFE TRANSFAC yes 70313522
chr6 12332474 12332478 NFE TRANSFAC yes 99961817
chr6 12332474 12332479 GATA1 TRANSFAC yes 70313523
chr6 12332474 12332479 GATA1 TRANSFAC yes 99961818
chr6 12332474 12332480 GATA3 JASPAR yes 70313524
chr6 12332474 12332480 GATA3 JASPAR yes 99961819
SNP sites on vista50906[chr6:12332214-12332482]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12332233 rs111509811 A G
EP300 FOXA1 GATA3 PRDM1 TCF12
8837894
chr6 12332258 rs183394148 C T
EP300 FOXA1 GATA3 TCF12 ZNF263
8837895
chr6 12332295 rs146760894 G A
CEBPB EP300 FOXA1 GATA3 TCF12
8837896
chr6 12332351 rs186613143 T C
CEBPB EP300 FOXA1 FOXI1 GATA3 POU4F2 TCF12 YY1
8837897
Genes possibly regulated by vista50906[chr6:12332214-12332482]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 58382
Expression level of Genes
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miRNAs possibly regulated by vista50906[chr6:12332214-12332482]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results