EnhancerDB
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  3. vista50912[chr6:12383787-12384051]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50912[chr6:12383787-12384051]
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Tissue distribution of vista50912
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Transcription factor that possibly regulate vista50912[chr6:12383787-12384051]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12383692 12384117 NFIC UCSC Txn Factor no Conserved 108538554
chr6 12383737 12384080 ATF2 UCSC Txn Factor no Conserved 108538555
chr6 12383742 12384074 RUNX3 UCSC Txn Factor no Conserved 108538556
chr6 12383825 12383945 SRF UCSC Txn Factor no Conserved 108538557
chr6 12383793 12383797 LFA1 TRANSFAC yes 70313775
chr6 12383793 12383797 LFA1 TRANSFAC yes 99968869
chr6 12383793 12383805 PKNOX2 JASPAR yes 70313776
chr6 12383793 12383805 PKNOX2 JASPAR yes 99968870
chr6 12383794 12383803 SNAI2 JASPAR yes 70313777
chr6 12383794 12383803 SNAI2 JASPAR yes 99968871
chr6 12383800 12383812 NHLH1 JASPAR yes 70313778
chr6 12383800 12383812 NHLH1 JASPAR yes 99968872
chr6 12383801 12383811 NHLH1 JASPAR yes 70313779
chr6 12383801 12383811 NHLH1 JASPAR yes 99968873
chr6 12383804 12383815 NFE2L2 JASPAR yes 70313780
chr6 12383804 12383815 NFE2L2 JASPAR yes 99968874
chr6 12383807 12383813 ESR1 TRANSFAC yes 70313781
chr6 12383807 12383813 ESR1 TRANSFAC yes 99968875
chr6 12383809 12383813 ESR1 TRANSFAC yes 70313782
chr6 12383809 12383813 ESR1 TRANSFAC yes 99968876
chr6 12383843 12383853 SP1 JASPAR yes 70313783
chr6 12383843 12383853 SP1 JASPAR yes 99968877
chr6 12383844 12383854 SP1 JASPAR yes 70313784
chr6 12383844 12383854 SP1 JASPAR yes 99968878
chr6 12383850 12383871 IRF1 JASPAR yes 70313785
chr6 12383850 12383871 IRF1 JASPAR yes 99968879
chr6 12383852 12383867 STAT2 JASPAR yes 70313786
chr6 12383852 12383867 STAT2 JASPAR yes 99968880
chr6 12383853 12383867 STAT1 JASPAR yes 70313787
chr6 12383853 12383867 STAT1 JASPAR yes 99968881
chr6 12383855 12383876 IRF1 JASPAR yes 70313788
chr6 12383855 12383876 IRF1 JASPAR yes 99968882
chr6 12383857 12383862 ETS2 TRANSFAC yes 70313789
chr6 12383857 12383862 ETS2 TRANSFAC yes 99968883
chr6 12383864 12383868 NFE TRANSFAC yes 70313790
chr6 12383864 12383868 NFE TRANSFAC yes 99968884
chr6 12383871 12383885 STAT1 JASPAR yes 70313791
chr6 12383871 12383885 STAT1 JASPAR yes 99968885
chr6 12383878 12383896 SRF JASPAR yes 70313792
chr6 12383878 12383896 SRF JASPAR yes 99968886
chr6 12383880 12383896 SRF JASPAR yes 70313793
chr6 12383880 12383896 SRF JASPAR yes 99968887
chr6 12383880 12383898 SRF JASPAR yes 70313794
chr6 12383880 12383898 SRF JASPAR yes 99968888
chr6 12383881 12383893 SRF JASPAR yes 70313795
chr6 12383881 12383893 SRF JASPAR yes 99968889
chr6 12383883 12383895 SRF JASPAR yes 70313796
chr6 12383883 12383895 SRF JASPAR yes 99968890
chr6 12383889 12383895 NFIC JASPAR yes 70313797
chr6 12383889 12383895 NFIC JASPAR yes 99968891
chr6 12383890 12383902 PKNOX2 JASPAR yes 70313798
chr6 12383890 12383902 PKNOX2 JASPAR yes 99968892
chr6 12383910 12383923 JUN JASPAR yes 70313799
chr6 12383910 12383923 JUN JASPAR yes 99968893
chr6 12383911 12383925 ATF7 JASPAR yes 70313800
chr6 12383911 12383925 BATF3 JASPAR yes 70313801
chr6 12383911 12383925 ATF7 JASPAR yes 99968894
chr6 12383911 12383925 BATF3 JASPAR yes 99968895
chr6 12383912 12383924 DBP JASPAR yes 70313802
chr6 12383912 12383924 HLF JASPAR yes 70313803
chr6 12383912 12383924 JDP2 JASPAR yes 70313804
chr6 12383912 12383924 DBP JASPAR yes 99968896
chr6 12383912 12383924 HLF JASPAR yes 99968897
chr6 12383912 12383924 JDP2 JASPAR yes 99968898
chr6 12383912 12383927 JUND JASPAR yes 70313805
chr6 12383912 12383927 JUND JASPAR yes 99968899
chr6 12383921 12383932 ELF5 JASPAR yes 70313806
chr6 12383921 12383932 ELF5 JASPAR yes 99968900
chr6 12383921 12383934 ELF1 JASPAR yes 70313807
chr6 12383921 12383934 ELF1 JASPAR yes 99968901
chr6 12383929 12383933 ESR1 TRANSFAC yes 70313808
chr6 12383929 12383933 ESR1 TRANSFAC yes 99968902
chr6 12383941 12383946 MYC TRANSFAC yes 70313809
chr6 12383941 12383946 MYC TRANSFAC yes 99968903
chr6 12383948 12383952 NFE TRANSFAC yes 70313810
chr6 12383948 12383952 NFE TRANSFAC yes 99968904
chr6 12383948 12383961 SMAD2 JASPAR yes 70313811
chr6 12383948 12383961 SMAD2 JASPAR yes 99968905
chr6 12383960 12383973 TFAP2A JASPAR yes 70313812
chr6 12383960 12383973 TFAP2B JASPAR yes 70313813
chr6 12383960 12383973 TFAP2C JASPAR yes 70313814
chr6 12383960 12383973 TFAP2A JASPAR yes 99968906
chr6 12383960 12383973 TFAP2B JASPAR yes 99968907
chr6 12383960 12383973 TFAP2C JASPAR yes 99968908
chr6 12383976 12383988 GRHL1 JASPAR yes 70313815
chr6 12383976 12383988 GRHL1 JASPAR yes 99968909
chr6 12383977 12383987 TFCP2 JASPAR yes 70313816
chr6 12383977 12383987 TFCP2 JASPAR yes 99968910
chr6 12383996 12384007 BATF JASPAR yes 70313817
chr6 12383996 12384007 BATF JASPAR yes 99968911
chr6 12384001 12384005 YY1 TRANSFAC yes 70313818
chr6 12384001 12384005 YY1 TRANSFAC yes 99968912
chr6 12384030 12384040 EN2 JASPAR yes 70313819
chr6 12384030 12384040 GBX1 JASPAR yes 70313820
chr6 12384030 12384040 GBX2 JASPAR yes 70313821
chr6 12384030 12384040 LBX2 JASPAR yes 70313822
chr6 12384030 12384040 LHX2 JASPAR yes 70313823
chr6 12384030 12384040 EN2 JASPAR yes 99968913
chr6 12384030 12384040 GBX1 JASPAR yes 99968914
chr6 12384030 12384040 GBX2 JASPAR yes 99968915
chr6 12384030 12384040 LBX2 JASPAR yes 99968916
chr6 12384030 12384040 LHX2 JASPAR yes 99968917
chr6 12384031 12384035 H1TF2 TRANSFAC yes 70313824
chr6 12384031 12384035 NFE TRANSFAC yes 70313825
chr6 12384031 12384035 SRF TRANSFAC yes 70313826
chr6 12384031 12384035 H1TF2 TRANSFAC yes 99968918
chr6 12384031 12384035 NFE TRANSFAC yes 99968919
chr6 12384031 12384035 SRF TRANSFAC yes 99968920
chr6 12384031 12384039 BARX1 JASPAR yes 70313827
chr6 12384031 12384039 BSX JASPAR yes 70313828
chr6 12384031 12384039 EN1 JASPAR yes 70313829
chr6 12384031 12384039 ISX JASPAR yes 70313830
chr6 12384031 12384039 LHX9 JASPAR yes 70313831
chr6 12384031 12384039 MSX1 JASPAR yes 70313832
chr6 12384031 12384039 MSX2 JASPAR yes 70313833
chr6 12384031 12384039 PRRX1 JASPAR yes 70313834
chr6 12384031 12384039 RAX2 JASPAR yes 70313835
chr6 12384031 12384039 SHOX JASPAR yes 70313836
chr6 12384031 12384039 BARX1 JASPAR yes 99968921
chr6 12384031 12384039 BSX JASPAR yes 99968922
chr6 12384031 12384039 EN1 JASPAR yes 99968923
chr6 12384031 12384039 ISX JASPAR yes 99968924
chr6 12384031 12384039 LHX9 JASPAR yes 99968925
chr6 12384031 12384039 MSX1 JASPAR yes 99968926
chr6 12384031 12384039 MSX2 JASPAR yes 99968927
chr6 12384031 12384039 PRRX1 JASPAR yes 99968928
chr6 12384031 12384039 RAX2 JASPAR yes 99968929
chr6 12384031 12384039 SHOX JASPAR yes 99968930
chr6 12384034 12384045 CEBPB JASPAR yes 70313837
chr6 12384034 12384045 CEBPB JASPAR yes 99968931
chr6 12384036 12384044 FEV JASPAR yes 70313838
chr6 12384036 12384044 FEV JASPAR yes 99968932
SNP sites on vista50912[chr6:12383787-12384051]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12383814 rs116415985 A T
ATF2 NFE2L2 NFIC RUNX3
8838515
chr6 12383911 rs62390111 T C
ATF2 ATF7 BATF3 JUN NFIC RUNX3 SRF
8838516
chr6 12383982 rs13218663 C T
ATF2 GRHL1 NFIC RUNX3 TFCP2
8838517
chr6 12384023 rs16872748 A C
ATF2 NFIC RUNX3
8838518
Genes possibly regulated by vista50912[chr6:12383787-12384051]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 6809
Expression level of Genes
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miRNAs possibly regulated by vista50912[chr6:12383787-12384051]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results