EnhancerDB
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  3. vista50928[chr6:12771306-12771602]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50928[chr6:12771306-12771602]
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Tissue distribution of vista50928
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Transcription factor that possibly regulate vista50928[chr6:12771306-12771602]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12771323 12771326 MYB TRANSFAC yes 70314697
chr6 12771393 12771397 YY1 TRANSFAC yes 70314698
chr6 12771394 12771404 NFIA JASPAR yes 70314699
chr6 12771395 12771404 NFIX JASPAR yes 70314700
chr6 12771396 12771402 NFIC JASPAR yes 70314701
chr6 12771424 12771445 ZNF263 JASPAR yes 70314702
chr6 12771435 12771450 STAT2 JASPAR yes 70314703
chr6 12771438 12771448 NFATC3 JASPAR yes 70314704
chr6 12771440 12771447 NFATC2 JASPAR yes 70314705
chr6 12771444 12771454 PAX3 JASPAR yes 70314706
chr6 12771444 12771454 PAX7 JASPAR yes 70314707
chr6 12771444 12771455 PHOX2A JASPAR yes 70314708
chr6 12771444 12771455 PROP1 JASPAR yes 70314709
chr6 12771453 12771463 GSC2 JASPAR yes 70314710
chr6 12771454 12771462 OTX1 JASPAR yes 70314711
chr6 12771454 12771462 OTX2 JASPAR yes 70314712
chr6 12771454 12771463 PITX3 JASPAR yes 70314713
chr6 12771464 12771468 YY1 TRANSFAC yes 70314714
chr6 12771474 12771484 TBR1 JASPAR yes 70314715
chr6 12771490 12771504 FOXF2 JASPAR yes 70314716
chr6 12771490 12771505 FOXP1 JASPAR yes 70314717
chr6 12771491 12771501 HMBOX1 JASPAR yes 70314718
chr6 12771493 12771504 FOXP2 JASPAR yes 70314719
chr6 12771495 12771502 FOXD2 JASPAR yes 70314720
chr6 12771495 12771502 FOXI1 JASPAR yes 70314721
chr6 12771495 12771502 FOXL1 JASPAR yes 70314722
chr6 12771495 12771502 FOXO4 JASPAR yes 70314723
chr6 12771495 12771502 FOXO6 JASPAR yes 70314724
chr6 12771495 12771502 FOXP3 JASPAR yes 70314725
chr6 12771495 12771503 FOXD1 JASPAR yes 70314726
chr6 12771495 12771503 FOXG1 JASPAR yes 70314727
chr6 12771495 12771503 FOXO3 JASPAR yes 70314728
chr6 12771495 12771504 SRY JASPAR yes 70314729
chr6 12771497 12771506 SOX9 JASPAR yes 70314730
chr6 12771510 12771531 ZNF263 JASPAR yes 70314731
chr6 12771511 12771521 GSC2 JASPAR yes 70314732
chr6 12771511 12771521 GSC JASPAR yes 70314733
chr6 12771512 12771520 OTX1 JASPAR yes 70314734
chr6 12771512 12771520 OTX2 JASPAR yes 70314735
chr6 12771512 12771521 PITX3 JASPAR yes 70314736
chr6 12771524 12771539 ESR2 JASPAR yes 70314737
chr6 12771529 12771542 NR2F1 JASPAR yes 70314738
chr6 12771533 12771543 RORA JASPAR yes 70314739
chr6 12771533 12771547 NR2F1 JASPAR yes 70314740
chr6 12771571 12771579 FOXC1 JASPAR yes 70314741
SNP sites on vista50928[chr6:12771306-12771602]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12771416 rs73360022 G A,T no 8840498
Genes possibly regulated by vista50928[chr6:12771306-12771602]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12717893 13288645 + PHACTR1 ENSG00000112137.12 12717893 0.88 0.87 6164 46587
Expression level of Genes
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miRNAs possibly regulated by vista50928[chr6:12771306-12771602]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results