EnhancerDB
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  3. vista50930[chr6:12799410-12799555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50930[chr6:12799410-12799555]
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Tissue distribution of vista50930
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Transcription factor that possibly regulate vista50930[chr6:12799410-12799555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12799438 12799445 TBP TRANSFAC yes 70314747
chr6 12799438 12799445 TFIID TRANSFAC yes 70314748
chr6 12799452 12799462 MZF1 JASPAR yes 70314749
chr6 12799460 12799474 BATF3 JASPAR yes 70314750
chr6 12799460 12799480 ESR1 JASPAR yes 70314751
chr6 12799461 12799466 GATA2 JASPAR yes 70314752
chr6 12799462 12799480 MAFF JASPAR yes 70314753
chr6 12799463 12799481 ESR2 JASPAR yes 70314754
chr6 12799464 12799481 ESR1 JASPAR yes 70314755
chr6 12799464 12799482 ESR2 JASPAR yes 70314756
chr6 12799465 12799478 JUN JASPAR yes 70314757
chr6 12799465 12799480 ESR2 JASPAR yes 70314758
chr6 12799482 12799487 GATA2 JASPAR yes 70314759
chr6 12799489 12799500 DMRT3 JASPAR yes 70314760
chr6 12799491 12799496 GATA2 JASPAR yes 70314761
chr6 12799504 12799508 ESR1 TRANSFAC yes 70314762
chr6 12799504 12799508 ESR1 TRANSFAC yes 99992815
chr6 12799516 12799527 NFE2L2 JASPAR yes 70314763
chr6 12799516 12799527 NFE2L2 JASPAR yes 99992816
chr6 12799519 12799525 ESR1 TRANSFAC yes 70314764
chr6 12799519 12799525 ESR1 TRANSFAC yes 99992817
chr6 12799521 12799525 ESR1 TRANSFAC yes 70314765
chr6 12799521 12799525 ESR1 TRANSFAC yes 99992818
chr6 12799523 12799538 ZIC3 JASPAR yes 70314766
chr6 12799523 12799538 ZIC4 JASPAR yes 70314767
chr6 12799523 12799538 ZIC3 JASPAR yes 99992819
chr6 12799523 12799538 ZIC4 JASPAR yes 99992820
chr6 12799524 12799538 ZIC1 JASPAR yes 70314768
chr6 12799524 12799538 ZIC1 JASPAR yes 99992821
chr6 12799534 12799538 ESR1 TRANSFAC yes 70314769
chr6 12799534 12799538 ESR1 TRANSFAC yes 99992822
chr6 12799540 12799552 TAL1 JASPAR yes 70314770
chr6 12799540 12799552 TAL1 JASPAR yes 99992823
chr6 12799541 12799553 NHLH1 JASPAR yes 70314771
chr6 12799541 12799553 NHLH1 JASPAR yes 99992824
chr6 12799542 12799552 TFAP4 JASPAR yes 70314772
chr6 12799542 12799552 TFAP4 JASPAR yes 99992825
SNP sites on vista50930[chr6:12799410-12799555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12799417 rs9472583 C A,T no 8840667
Genes possibly regulated by vista50930[chr6:12799410-12799555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12717893 13288645 + PHACTR1 ENSG00000112137.12 12717893 0.88 0.87 6164 18483
Expression level of Genes
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miRNAs possibly regulated by vista50930[chr6:12799410-12799555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results