EnhancerDB
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  3. vista50942[chr6:13261181-13261379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50942[chr6:13261181-13261379]
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Tissue distribution of vista50942
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Transcription factor that possibly regulate vista50942[chr6:13261181-13261379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13261170 13261188 NR3C1 JASPAR yes 70315090
chr6 13261170 13261188 NR3C1 JASPAR yes 100016620
chr6 13261182 13261197 RUNX2 JASPAR yes 70315091
chr6 13261182 13261197 RUNX2 JASPAR yes 100016621
chr6 13261185 13261191 SOX10 JASPAR yes 70315092
chr6 13261185 13261191 SOX10 JASPAR yes 100016622
chr6 13261191 13261196 SP1 TRANSFAC yes 70315093
chr6 13261191 13261196 SP1 TRANSFAC yes 100016623
chr6 13261194 13261207 NFKB2 JASPAR yes 70315094
chr6 13261194 13261207 NFKB2 JASPAR yes 100016624
chr6 13261195 13261205 NFKB1 JASPAR yes 70315095
chr6 13261195 13261205 NFKB1 JASPAR yes 100016625
chr6 13261195 13261206 NFKB1 JASPAR yes 70315096
chr6 13261195 13261206 NFKB1 JASPAR yes 100016626
chr6 13261199 13261203 NFE TRANSFAC yes 70315097
chr6 13261199 13261203 NFE TRANSFAC yes 100016627
chr6 13261219 13261227 FOXO3 JASPAR yes 70315098
chr6 13261219 13261227 FOXO3 JASPAR yes 100016628
chr6 13261237 13261241 NFE TRANSFAC yes 70315099
chr6 13261237 13261241 NFE TRANSFAC yes 100016629
chr6 13261237 13261242 GATA1 TRANSFAC yes 70315100
chr6 13261237 13261242 GATA1 TRANSFAC yes 100016630
chr6 13261237 13261243 GATA3 JASPAR yes 70315101
chr6 13261237 13261243 GATA3 JASPAR yes 100016631
chr6 13261242 13261253 SPDEF JASPAR yes 70315102
chr6 13261242 13261253 SPDEF JASPAR yes 100016632
chr6 13261243 13261252 ELK4 JASPAR yes 70315103
chr6 13261243 13261252 ELK4 JASPAR yes 100016633
chr6 13261243 13261253 ERG JASPAR yes 70315104
chr6 13261243 13261253 ETS1 JASPAR yes 70315105
chr6 13261243 13261253 ETV1 JASPAR yes 70315106
chr6 13261243 13261253 ETV3 JASPAR yes 70315107
chr6 13261243 13261253 ETV4 JASPAR yes 70315108
chr6 13261243 13261253 ETV5 JASPAR yes 70315109
chr6 13261243 13261253 FEV JASPAR yes 70315110
chr6 13261243 13261253 FLI1 JASPAR yes 70315111
chr6 13261243 13261253 ERG JASPAR yes 100016634
chr6 13261243 13261253 ETS1 JASPAR yes 100016635
chr6 13261243 13261253 ETV1 JASPAR yes 100016636
chr6 13261243 13261253 ETV3 JASPAR yes 100016637
chr6 13261243 13261253 ETV4 JASPAR yes 100016638
chr6 13261243 13261253 ETV5 JASPAR yes 100016639
chr6 13261243 13261253 FEV JASPAR yes 100016640
chr6 13261243 13261253 FLI1 JASPAR yes 100016641
chr6 13261247 13261256 NFIX JASPAR yes 70315112
chr6 13261247 13261256 NFIX JASPAR yes 100016642
chr6 13261247 13261257 NFIA JASPAR yes 70315113
chr6 13261247 13261257 NFIA JASPAR yes 100016643
chr6 13261249 13261255 NFIC JASPAR yes 70315114
chr6 13261249 13261255 NFIC JASPAR yes 100016644
chr6 13261275 13261290 MEF2C JASPAR yes 70315115
chr6 13261275 13261290 MEF2C JASPAR yes 100016645
chr6 13261276 13261291 MEF2A JASPAR yes 70315116
chr6 13261276 13261291 MEF2A JASPAR yes 100016646
chr6 13261277 13261289 MEF2A JASPAR yes 70315117
chr6 13261277 13261289 MEF2B JASPAR yes 70315118
chr6 13261277 13261289 MEF2D JASPAR yes 70315119
chr6 13261277 13261289 MEF2A JASPAR yes 100016647
chr6 13261277 13261289 MEF2B JASPAR yes 100016648
chr6 13261277 13261289 MEF2D JASPAR yes 100016649
chr6 13261278 13261288 MEF2A JASPAR yes 70315120
chr6 13261278 13261288 MEF2A JASPAR yes 100016650
chr6 13261285 13261288 MYB TRANSFAC yes 70315121
chr6 13261285 13261288 MYB TRANSFAC yes 100016651
chr6 13261295 13261299 YY1 TRANSFAC yes 70315122
chr6 13261295 13261299 YY1 TRANSFAC yes 100016652
chr6 13261307 13261321 GLIS3 JASPAR yes 70315123
chr6 13261307 13261321 GLIS3 JASPAR yes 100016653
chr6 13261312 13261332 PPARG JASPAR yes 70315124
chr6 13261312 13261332 PPARG JASPAR yes 100016654
SNP sites on vista50942[chr6:13261181-13261379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13261238 rs556293073 C CT
GATA1 GATA3 NFE
8842768
chr6 13261246 rs74521580 C T
ELK4 ERG ETS1 ETV1 ETV3 ETV4 ETV5 FEV FLI1 SPDEF
8842769
chr6 13261256 rs393032 C T
NFIA NFIX
8842770
Genes possibly regulated by vista50942[chr6:13261181-13261379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13266774 13328815 - TBC1D7 ENSG00000145979.13 13328815 0.85 0.99 6165 32564
Expression level of Genes
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miRNAs possibly regulated by vista50942[chr6:13261181-13261379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results