EnhancerDB
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  3. vista50944[chr6:13300304-13300532]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50944[chr6:13300304-13300532]
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Tissue distribution of vista50944
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Transcription factor that possibly regulate vista50944[chr6:13300304-13300532]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13300370 13300388 NFYA JASPAR yes 70315183
chr6 13300370 13300388 NFYA JASPAR yes 100017345
chr6 13300373 13300389 NFYA JASPAR yes 70315184
chr6 13300373 13300389 NFYA JASPAR yes 100017346
chr6 13300376 13300391 NFYB JASPAR yes 70315185
chr6 13300376 13300391 NFYB JASPAR yes 100017347
chr6 13300378 13300383 NFY TRANSFAC yes 70315186
chr6 13300378 13300383 NFY TRANSFAC yes 100017348
chr6 13300380 13300394 TLX1 JASPAR yes 70315187
chr6 13300380 13300394 TLX1 JASPAR yes 100017349
chr6 13300391 13300410 REST JASPAR yes 70315188
chr6 13300391 13300410 REST JASPAR yes 100017350
chr6 13300393 13300404 TFAP2A JASPAR yes 70315189
chr6 13300393 13300404 TFAP2A JASPAR yes 100017351
chr6 13300409 13300424 RUNX2 JASPAR yes 70315190
chr6 13300409 13300424 RUNX2 JASPAR yes 100017352
chr6 13300440 13300451 CEBPB JASPAR yes 70315191
chr6 13300440 13300451 CEBPB JASPAR yes 100017353
chr6 13300440 13300452 HLF JASPAR yes 70315192
chr6 13300440 13300452 HLF JASPAR yes 100017354
chr6 13300440 13300453 ATF4 JASPAR yes 70315193
chr6 13300440 13300453 ATF4 JASPAR yes 100017355
chr6 13300441 13300451 CEBPB JASPAR yes 70315194
chr6 13300441 13300451 CEBPD JASPAR yes 70315195
chr6 13300441 13300451 CEBPE JASPAR yes 70315196
chr6 13300441 13300451 CEBPG JASPAR yes 70315197
chr6 13300441 13300451 CEBPB JASPAR yes 100017356
chr6 13300441 13300451 CEBPD JASPAR yes 100017357
chr6 13300441 13300451 CEBPE JASPAR yes 100017358
chr6 13300441 13300451 CEBPG JASPAR yes 100017359
chr6 13300441 13300454 JUN JASPAR yes 70315198
chr6 13300441 13300454 JUN JASPAR yes 100017360
chr6 13300443 13300449 ATF1 TRANSFAC yes 70315199
chr6 13300443 13300449 ATF1 TRANSFAC yes 100017361
chr6 13300443 13300455 CREB1 JASPAR yes 70315200
chr6 13300443 13300455 CREB1 JASPAR yes 100017362
chr6 13300457 13300461 NFE TRANSFAC yes 70315201
chr6 13300457 13300461 NFE TRANSFAC yes 100017363
chr6 13300459 13300470 EBF1 JASPAR yes 70315202
chr6 13300459 13300470 EBF1 JASPAR yes 100017364
chr6 13300480 13300491 FOXB1 JASPAR yes 70315203
chr6 13300480 13300491 FOXB1 JASPAR yes 100017365
chr6 13300481 13300492 FOXB1 JASPAR yes 70315204
chr6 13300481 13300492 FOXB1 JASPAR yes 100017366
chr6 13300488 13300492 YY1 TRANSFAC yes 70315205
chr6 13300488 13300492 YY1 TRANSFAC yes 100017367
chr6 13300503 13300508 SP1 TRANSFAC yes 70315206
chr6 13300503 13300508 SP1 TRANSFAC yes 100017368
chr6 13300504 13300524 PPARG JASPAR yes 70315207
chr6 13300504 13300524 PPARG JASPAR yes 100017369
chr6 13300507 13300511 LFA1 TRANSFAC yes 70315208
chr6 13300507 13300511 LFA1 TRANSFAC yes 100017370
SNP sites on vista50944[chr6:13300304-13300532]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13300368 rs641293 A C no 8842910
chr6 13300407 rs148051715 G A
REST
8842911
chr6 13300454 rs641688 A G
CREB1 JUN
8842912
chr6 13300496 rs488297 C T no 8842913
chr6 13300502 rs641758 A G no 8842914
Genes possibly regulated by vista50944[chr6:13300304-13300532]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13266774 13328815 - TBC1D7 ENSG00000145979.13 13328815 0.85 0.99 6165 71717
Expression level of Genes
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miRNAs possibly regulated by vista50944[chr6:13300304-13300532]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results