EnhancerDB
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  3. vista50952[chr6:13391107-13391478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50952[chr6:13391107-13391478]
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Tissue distribution of vista50952
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Transcription factor that possibly regulate vista50952[chr6:13391107-13391478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13391099 13391112 JUN JASPAR yes 70315650
chr6 13391099 13391112 JUN JASPAR yes 100024415
chr6 13391100 13391113 ATF4 JASPAR yes 70315651
chr6 13391100 13391113 ATF4 JASPAR yes 100024416
chr6 13391122 13391130 FOXC1 JASPAR yes 70315652
chr6 13391122 13391130 FOXC1 JASPAR yes 100024417
chr6 13391138 13391153 AR JASPAR yes 70315653
chr6 13391138 13391153 AR JASPAR yes 100024418
chr6 13391138 13391155 NR3C2 JASPAR yes 70315654
chr6 13391138 13391155 NR3C2 JASPAR yes 100024419
chr6 13391139 13391152 ELF1 JASPAR yes 70315655
chr6 13391139 13391152 ELF1 JASPAR yes 100024420
chr6 13391140 13391152 ELF4 JASPAR yes 70315656
chr6 13391140 13391152 ELF4 JASPAR yes 100024421
chr6 13391141 13391152 ETV2 JASPAR yes 70315657
chr6 13391141 13391152 ETV2 JASPAR yes 100024422
chr6 13391142 13391152 ELK1 JASPAR yes 70315658
chr6 13391142 13391152 ELK3 JASPAR yes 70315659
chr6 13391142 13391152 ERF JASPAR yes 70315660
chr6 13391142 13391152 ERG JASPAR yes 70315661
chr6 13391142 13391152 ETS1 JASPAR yes 70315662
chr6 13391142 13391152 ETV1 JASPAR yes 70315663
chr6 13391142 13391152 ETV3 JASPAR yes 70315664
chr6 13391142 13391152 ETV4 JASPAR yes 70315665
chr6 13391142 13391152 ETV6 JASPAR yes 70315666
chr6 13391142 13391152 FEV JASPAR yes 70315667
chr6 13391142 13391152 FLI1 JASPAR yes 70315668
chr6 13391142 13391152 GABPA JASPAR yes 70315669
chr6 13391142 13391152 ELK1 JASPAR yes 100024423
chr6 13391142 13391152 ELK3 JASPAR yes 100024424
chr6 13391142 13391152 ERF JASPAR yes 100024425
chr6 13391142 13391152 ERG JASPAR yes 100024426
chr6 13391142 13391152 ETS1 JASPAR yes 100024427
chr6 13391142 13391152 ETV1 JASPAR yes 100024428
chr6 13391142 13391152 ETV3 JASPAR yes 100024429
chr6 13391142 13391152 ETV4 JASPAR yes 100024430
chr6 13391142 13391152 ETV6 JASPAR yes 100024431
chr6 13391142 13391152 FEV JASPAR yes 100024432
chr6 13391142 13391152 FLI1 JASPAR yes 100024433
chr6 13391142 13391152 GABPA JASPAR yes 100024434
chr6 13391142 13391153 ELK4 JASPAR yes 70315670
chr6 13391142 13391153 FLI1 JASPAR yes 70315671
chr6 13391142 13391153 ELK4 JASPAR yes 100024435
chr6 13391142 13391153 FLI1 JASPAR yes 100024436
chr6 13391143 13391151 EHF JASPAR yes 70315672
chr6 13391143 13391151 FEV JASPAR yes 70315673
chr6 13391143 13391151 EHF JASPAR yes 100024437
chr6 13391143 13391151 FEV JASPAR yes 100024438
chr6 13391144 13391151 SPI1 JASPAR yes 70315674
chr6 13391144 13391151 SPI1 JASPAR yes 100024439
chr6 13391151 13391165 FOXF2 JASPAR yes 70315675
chr6 13391151 13391165 FOXF2 JASPAR yes 100024440
chr6 13391152 13391163 FOXH1 JASPAR yes 70315676
chr6 13391152 13391163 FOXH1 JASPAR yes 100024441
chr6 13391154 13391165 FOXP2 JASPAR yes 70315677
chr6 13391154 13391165 FOXP2 JASPAR yes 100024442
chr6 13391156 13391164 FOXG1 JASPAR yes 70315678
chr6 13391156 13391164 FOXG1 JASPAR yes 100024443
chr6 13391162 13391180 MAFF JASPAR yes 70315679
chr6 13391162 13391180 MAFF JASPAR yes 100024444
chr6 13391179 13391182 MYB TRANSFAC yes 70315680
chr6 13391179 13391182 MYB TRANSFAC yes 100024445
chr6 13391179 13391191 TAL1 JASPAR yes 70315681
chr6 13391179 13391191 TAL1 JASPAR yes 100024446
chr6 13391180 13391192 NHLH1 JASPAR yes 70315682
chr6 13391180 13391192 NHLH1 JASPAR yes 100024447
chr6 13391181 13391191 MSC JASPAR yes 70315683
chr6 13391181 13391191 NHLH1 JASPAR yes 70315684
chr6 13391181 13391191 TFAP4 JASPAR yes 70315685
chr6 13391181 13391191 MSC JASPAR yes 100024448
chr6 13391181 13391191 NHLH1 JASPAR yes 100024449
chr6 13391181 13391191 TFAP4 JASPAR yes 100024450
chr6 13391213 13391227 ONECUT2 JASPAR yes 70315686
chr6 13391213 13391227 ONECUT3 JASPAR yes 70315687
chr6 13391213 13391227 ONECUT2 JASPAR yes 100024451
chr6 13391213 13391227 ONECUT3 JASPAR yes 100024452
chr6 13391219 13391223 YY1 TRANSFAC yes 70315688
chr6 13391219 13391223 YY1 TRANSFAC yes 100024453
chr6 13391226 13391245 CTCF JASPAR yes 70315689
chr6 13391226 13391245 CTCF JASPAR yes 100024454
chr6 13391239 13391253 TLX1 JASPAR yes 70315690
chr6 13391239 13391253 TLX1 JASPAR yes 100024455
chr6 13391243 13391258 HNF4G JASPAR yes 70315691
chr6 13391243 13391258 HNF4G JASPAR yes 100024456
chr6 13391244 13391259 HNF4A JASPAR yes 70315692
chr6 13391244 13391259 HNF4A JASPAR yes 100024457
chr6 13391261 13391265 H1TF2 TRANSFAC yes 70315693
chr6 13391261 13391265 NFE TRANSFAC yes 70315694
chr6 13391261 13391265 SRF TRANSFAC yes 70315695
chr6 13391261 13391265 H1TF2 TRANSFAC yes 100024458
chr6 13391261 13391265 NFE TRANSFAC yes 100024459
chr6 13391261 13391265 SRF TRANSFAC yes 100024460
chr6 13391261 13391271 HOXA13 JASPAR yes 70315696
chr6 13391261 13391271 HOXB13 JASPAR yes 70315697
chr6 13391261 13391271 HOXD13 JASPAR yes 70315698
chr6 13391261 13391271 HOXA13 JASPAR yes 100024461
chr6 13391261 13391271 HOXB13 JASPAR yes 100024462
chr6 13391261 13391271 HOXD13 JASPAR yes 100024463
chr6 13391291 13391294 MYB TRANSFAC yes 70315699
chr6 13391291 13391294 MYB TRANSFAC yes 100024464
chr6 13391291 13391306 PRDM1 JASPAR yes 70315700
chr6 13391291 13391306 PRDM1 JASPAR yes 100024465
chr6 13391300 13391305 ETS2 TRANSFAC yes 70315701
chr6 13391300 13391305 ETS2 TRANSFAC yes 100024466
chr6 13391310 13391328 SRF JASPAR yes 70315702
chr6 13391310 13391328 SRF JASPAR yes 100024467
chr6 13391312 13391328 SRF JASPAR yes 70315703
chr6 13391312 13391328 SRF JASPAR yes 100024468
chr6 13391317 13391332 PRDM1 JASPAR yes 70315704
chr6 13391317 13391332 PRDM1 JASPAR yes 100024469
chr6 13391321 13391326 ETS2 TRANSFAC yes 70315705
chr6 13391321 13391326 ETS2 TRANSFAC yes 100024470
chr6 13391337 13391346 NKX3-2 JASPAR yes 70315706
chr6 13391337 13391346 NKX3-2 JASPAR yes 100024471
chr6 13391338 13391346 ISL2 JASPAR yes 70315707
chr6 13391338 13391346 ISL2 JASPAR yes 100024472
chr6 13391341 13391351 ALX3 JASPAR yes 70315708
chr6 13391341 13391351 MIXL1 JASPAR yes 70315709
chr6 13391341 13391351 NOTO JASPAR yes 70315710
chr6 13391341 13391351 POU6F1 JASPAR yes 70315711
chr6 13391341 13391351 ALX3 JASPAR yes 100024473
chr6 13391341 13391351 MIXL1 JASPAR yes 100024474
chr6 13391341 13391351 NOTO JASPAR yes 100024475
chr6 13391341 13391351 POU6F1 JASPAR yes 100024476
chr6 13391342 13391350 ISX JASPAR yes 70315712
chr6 13391342 13391350 LMX1A JASPAR yes 70315713
chr6 13391342 13391350 LMX1B JASPAR yes 70315714
chr6 13391342 13391350 NKX6-1 JASPAR yes 70315715
chr6 13391342 13391350 NKX6-2 JASPAR yes 70315716
chr6 13391342 13391350 PRRX1 JASPAR yes 70315717
chr6 13391342 13391350 RAX2 JASPAR yes 70315718
chr6 13391342 13391350 SHOX JASPAR yes 70315719
chr6 13391342 13391350 UNCX JASPAR yes 70315720
chr6 13391342 13391350 VAX1 JASPAR yes 70315721
chr6 13391342 13391350 ISX JASPAR yes 100024477
chr6 13391342 13391350 LMX1A JASPAR yes 100024478
chr6 13391342 13391350 LMX1B JASPAR yes 100024479
chr6 13391342 13391350 NKX6-1 JASPAR yes 100024480
chr6 13391342 13391350 NKX6-2 JASPAR yes 100024481
chr6 13391342 13391350 PRRX1 JASPAR yes 100024482
chr6 13391342 13391350 RAX2 JASPAR yes 100024483
chr6 13391342 13391350 SHOX JASPAR yes 100024484
chr6 13391342 13391350 UNCX JASPAR yes 100024485
chr6 13391342 13391350 VAX1 JASPAR yes 100024486
chr6 13391357 13391375 NFYA JASPAR yes 70315722
chr6 13391357 13391375 NFYA JASPAR yes 100024487
chr6 13391359 13391364 GATA2 JASPAR yes 70315723
chr6 13391359 13391364 GATA2 JASPAR yes 100024488
chr6 13391360 13391376 NFYA JASPAR yes 70315724
chr6 13391360 13391376 NFYA JASPAR yes 100024489
chr6 13391362 13391374 PBX1 JASPAR yes 70315725
chr6 13391362 13391374 PBX1 JASPAR yes 100024490
chr6 13391363 13391377 ONECUT3 JASPAR yes 70315726
chr6 13391363 13391377 ONECUT3 JASPAR yes 100024491
chr6 13391363 13391378 NFYB JASPAR yes 70315727
chr6 13391363 13391378 NFYB JASPAR yes 100024492
chr6 13391365 13391370 NFY TRANSFAC yes 70315728
chr6 13391365 13391370 NFY TRANSFAC yes 100024493
chr6 13391372 13391376 YY1 TRANSFAC yes 70315729
chr6 13391372 13391376 YY1 TRANSFAC yes 100024494
chr6 13391381 13391387 ZNF354C JASPAR yes 70315730
chr6 13391381 13391387 ZNF354C JASPAR yes 100024495
chr6 13391391 13391407 SOX8 JASPAR yes 70315731
chr6 13391391 13391407 SOX8 JASPAR yes 100024496
chr6 13391396 13391416 RREB1 JASPAR yes 70315732
chr6 13391396 13391416 RREB1 JASPAR yes 100024497
chr6 13391403 13391409 TCF4 TRANSFAC yes 70315733
chr6 13391403 13391409 TCF4 TRANSFAC yes 100024498
chr6 13391412 13391433 ZNF263 JASPAR yes 70315734
chr6 13391412 13391433 ZNF263 JASPAR yes 100024499
chr6 13391415 13391430 NR2C2 JASPAR yes 70315735
chr6 13391415 13391430 NR2C2 JASPAR yes 100024500
chr6 13391415 13391436 ZNF263 JASPAR yes 70315736
chr6 13391415 13391436 ZNF263 JASPAR yes 100024501
chr6 13391416 13391430 RXRB JASPAR yes 70315737
chr6 13391416 13391430 RXRB JASPAR yes 100024502
chr6 13391423 13391433 TBX21 JASPAR yes 70315738
chr6 13391423 13391433 TBX21 JASPAR yes 100024503
chr6 13391423 13391434 TBX20 JASPAR yes 70315739
chr6 13391423 13391434 TBX2 JASPAR yes 70315740
chr6 13391423 13391434 TBX20 JASPAR yes 100024504
chr6 13391423 13391434 TBX2 JASPAR yes 100024505
chr6 13391423 13391436 EOMES JASPAR yes 70315741
chr6 13391423 13391436 EOMES JASPAR yes 100024506
chr6 13391424 13391434 TBR1 JASPAR yes 70315742
chr6 13391424 13391434 TBR1 JASPAR yes 100024507
chr6 13391429 13391435 HiNF-A TRANSFAC yes 70315743
chr6 13391429 13391435 HiNF-A TRANSFAC yes 100024508
chr6 13391441 13391456 STAT1 JASPAR yes 70315744
chr6 13391441 13391456 STAT1 JASPAR yes 100024509
chr6 13391443 13391454 STAT1 JASPAR yes 70315745
chr6 13391443 13391454 STAT1 JASPAR yes 100024510
chr6 13391450 13391453 MYB TRANSFAC yes 70315746
chr6 13391450 13391453 MYB TRANSFAC yes 100024511
SNP sites on vista50952[chr6:13391107-13391478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13391155 rs821292 G A
FOXF2 FOXH1 FOXP2 NR3C2
8843818
chr6 13391347 rs17700842 T C
ALX3 ISX LMX1A LMX1B MIXL1 NKX6-1 NKX6-2 NOTO POU6F1 PRRX1 RAX2 SHOX UNCX VAX1
8843819
chr6 13391399 rs74625335 G A,C
RREB1 SOX8
8843820
chr6 13391454 rs59033253 C T
STAT1
8843821
chr6 13391476 rs149607464 G GT no 8843822
Genes possibly regulated by vista50952[chr6:13391107-13391478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13266774 13328815 - TBC1D7 ENSG00000145979.13 13328815 0.85 0.99 6165 37708
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 3584
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 5063
Expression level of Genes
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miRNAs possibly regulated by vista50952[chr6:13391107-13391478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results