EnhancerDB
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  3. vista50957[chr6:13449737-13449960]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50957[chr6:13449737-13449960]
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Tissue distribution of vista50957
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Transcription factor that possibly regulate vista50957[chr6:13449737-13449960]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13449738 13449745 NKX3-1 JASPAR yes 70316015
chr6 13449738 13449745 NKX3-1 JASPAR yes 100032913
chr6 13449740 13449752 POU2F1 JASPAR yes 70316016
chr6 13449740 13449752 POU2F1 JASPAR yes 100032914
chr6 13449742 13449751 POU3F4 JASPAR yes 70316017
chr6 13449742 13449751 POU3F4 JASPAR yes 100032915
chr6 13449778 13449789 DUX4 JASPAR yes 70316018
chr6 13449778 13449789 DUX4 JASPAR yes 100032916
chr6 13449796 13449811 STAT1 JASPAR yes 70316019
chr6 13449796 13449811 STAT1 JASPAR yes 100032917
chr6 13449799 13449815 ZNF143 JASPAR yes 70316020
chr6 13449799 13449815 ZNF143 JASPAR yes 100032918
chr6 13449813 13449830 ZNF410 JASPAR yes 70316021
chr6 13449813 13449830 ZNF410 JASPAR yes 100032919
chr6 13449822 13449827 ETS2 TRANSFAC yes 70316022
chr6 13449822 13449827 ETS2 TRANSFAC yes 100032920
chr6 13449841 13449854 DUXA JASPAR yes 70316023
chr6 13449841 13449854 DUXA JASPAR yes 100032921
chr6 13449842 13449845 MYB TRANSFAC yes 70316024
chr6 13449842 13449845 MYB TRANSFAC yes 100032922
chr6 13449842 13449853 DUX4 JASPAR yes 70316025
chr6 13449842 13449853 DUX4 JASPAR yes 100032923
chr6 13449844 13449855 FOS JASPAR yes 70316026
chr6 13449844 13449855 FOS JASPAR yes 100032924
chr6 13449845 13449856 FOSL2 JASPAR yes 70316027
chr6 13449845 13449856 JUNB JASPAR yes 70316028
chr6 13449845 13449856 FOSL2 JASPAR yes 100032925
chr6 13449845 13449856 JUNB JASPAR yes 100032926
chr6 13449846 13449852 JUN TRANSFAC yes 70316029
chr6 13449846 13449852 JUN TRANSFAC yes 100032927
chr6 13449856 13449861 SP1 TRANSFAC yes 70316030
chr6 13449856 13449861 SP1 TRANSFAC yes 100032928
chr6 13449862 13449874 E2F8 JASPAR yes 70316031
chr6 13449862 13449874 E2F8 JASPAR yes 100032929
chr6 13449874 13449890 RFX3 JASPAR yes 70316032
chr6 13449874 13449890 RFX3 JASPAR yes 100032930
chr6 13449913 13449923 HOXA13 JASPAR yes 70316033
chr6 13449913 13449923 HOXB13 JASPAR yes 70316034
chr6 13449913 13449923 HOXD13 JASPAR yes 70316035
chr6 13449913 13449923 HOXA13 JASPAR yes 100032931
chr6 13449913 13449923 HOXB13 JASPAR yes 100032932
chr6 13449913 13449923 HOXD13 JASPAR yes 100032933
chr6 13449913 13449924 HOXC13 JASPAR yes 70316036
chr6 13449913 13449924 HOXC13 JASPAR yes 100032934
chr6 13449917 13449921 TEAD2 TRANSFAC yes 70316037
chr6 13449917 13449921 TEAD2 TRANSFAC yes 100032935
chr6 13449938 13449959 IRF1 JASPAR yes 70316038
chr6 13449938 13449959 IRF1 JASPAR yes 100032936
chr6 13449956 13449969 SMAD2 JASPAR yes 70316039
chr6 13449956 13449969 SMAD2 JASPAR yes 100032937
SNP sites on vista50957[chr6:13449737-13449960]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13449951 rs79623397 T C
IRF1
8844567
Genes possibly regulated by vista50957[chr6:13449737-13449960]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 62066
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 63545
Expression level of Genes
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miRNAs possibly regulated by vista50957[chr6:13449737-13449960]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results