EnhancerDB
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  3. vista50958[chr6:13454706-13455038]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50958[chr6:13454706-13455038]
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Tissue distribution of vista50958
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Transcription factor that possibly regulate vista50958[chr6:13454706-13455038]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13454797 13455221 CTCF UCSC Txn Factor no Conserved 108538603
chr6 13454883 13455147 RAD21 UCSC Txn Factor no Conserved 108538604
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538605
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538606
chr6 13454706 13454710 YY1 TRANSFAC yes 70316040
chr6 13454706 13454710 YY1 TRANSFAC yes 100033544
chr6 13454729 13454743 TLX1 JASPAR yes 70316041
chr6 13454729 13454743 TLX1 JASPAR yes 100033545
chr6 13454746 13454757 ELK4 JASPAR yes 70316042
chr6 13454746 13454757 FLI1 JASPAR yes 70316043
chr6 13454746 13454757 ELK4 JASPAR yes 100033546
chr6 13454746 13454757 FLI1 JASPAR yes 100033547
chr6 13454746 13454759 ELF3 JASPAR yes 70316044
chr6 13454746 13454759 ELF3 JASPAR yes 100033548
chr6 13454747 13454757 ETV6 JASPAR yes 70316045
chr6 13454747 13454757 ETV6 JASPAR yes 100033549
chr6 13454747 13454758 ELF5 JASPAR yes 70316046
chr6 13454747 13454758 ELF5 JASPAR yes 100033550
chr6 13454747 13454759 EHF JASPAR yes 70316047
chr6 13454747 13454759 ELF1 JASPAR yes 70316048
chr6 13454747 13454759 ELF4 JASPAR yes 70316049
chr6 13454747 13454759 EHF JASPAR yes 100033551
chr6 13454747 13454759 ELF1 JASPAR yes 100033552
chr6 13454747 13454759 ELF4 JASPAR yes 100033553
chr6 13454747 13454760 ELF1 JASPAR yes 70316050
chr6 13454747 13454760 ELF1 JASPAR yes 100033554
chr6 13454748 13454755 SPI1 JASPAR yes 70316051
chr6 13454748 13454755 SPI1 JASPAR yes 100033555
chr6 13454748 13454756 EHF JASPAR yes 70316052
chr6 13454748 13454756 FEV JASPAR yes 70316053
chr6 13454748 13454756 EHF JASPAR yes 100033556
chr6 13454748 13454756 FEV JASPAR yes 100033557
chr6 13454772 13454787 MEF2C JASPAR yes 70316054
chr6 13454772 13454787 MEF2C JASPAR yes 100033558
chr6 13454774 13454789 FOXP1 JASPAR yes 70316055
chr6 13454774 13454789 FOXP1 JASPAR yes 100033559
chr6 13454775 13454796 IRF1 JASPAR yes 70316056
chr6 13454775 13454796 IRF1 JASPAR yes 100033560
chr6 13454776 13454782 TBP TRANSFAC yes 70316057
chr6 13454776 13454782 TBP TRANSFAC yes 100033561
chr6 13454780 13454801 IRF1 JASPAR yes 70316058
chr6 13454780 13454801 IRF1 JASPAR yes 100033562
chr6 13454781 13454796 LEF1 JASPAR yes 70316059
chr6 13454781 13454796 LEF1 JASPAR yes 100033563
chr6 13454781 13454802 IRF1 JASPAR yes 70316060
chr6 13454781 13454802 IRF1 JASPAR yes 100033564
chr6 13454785 13454799 STAT1 JASPAR yes 70316061
chr6 13454785 13454799 STAT1 JASPAR yes 100033565
chr6 13454785 13454800 PRDM1 JASPAR yes 70316062
chr6 13454785 13454800 STAT2 JASPAR yes 70316063
chr6 13454785 13454800 PRDM1 JASPAR yes 100033566
chr6 13454785 13454800 STAT2 JASPAR yes 100033567
chr6 13454787 13454808 IRF1 JASPAR yes 70316064
chr6 13454787 13454808 IRF1 JASPAR yes 100033568
chr6 13454789 13454794 ETS2 TRANSFAC yes 70316065
chr6 13454789 13454794 ETS2 TRANSFAC yes 100033569
chr6 13454792 13454806 STAT1 JASPAR yes 70316066
chr6 13454792 13454806 STAT1 JASPAR yes 100033570
chr6 13454792 13454807 STAT2 JASPAR yes 70316067
chr6 13454792 13454807 STAT2 JASPAR yes 100033571
chr6 13454825 13454829 YY1 TRANSFAC yes 70316068
chr6 13454825 13454829 YY1 TRANSFAC yes 100033572
chr6 13454913 13454933 RREB1 JASPAR yes 70316069
chr6 13454913 13454933 RREB1 JASPAR yes 100033573
chr6 13454915 13454921 SOX10 JASPAR yes 70316070
chr6 13454915 13454921 SOX10 JASPAR yes 100033574
chr6 13454938 13454944 NFE2 TRANSFAC yes 70316071
chr6 13454938 13454944 NFE2 TRANSFAC yes 100033575
chr6 13454982 13454996 JUN JASPAR yes 70316072
chr6 13454982 13454996 JUN JASPAR yes 100033576
chr6 13454985 13454996 FOSL2 JASPAR yes 70316073
chr6 13454985 13454996 JUNB JASPAR yes 70316074
chr6 13454985 13454996 FOSL2 JASPAR yes 100033577
chr6 13454985 13454996 JUNB JASPAR yes 100033578
chr6 13454986 13454997 FOS JASPAR yes 70316075
chr6 13454986 13454997 FOSL1 JASPAR yes 70316076
chr6 13454986 13454997 JUND JASPAR yes 70316077
chr6 13454986 13454997 NFE2 JASPAR yes 70316078
chr6 13454986 13454997 FOS JASPAR yes 100033579
chr6 13454986 13454997 FOSL1 JASPAR yes 100033580
chr6 13454986 13454997 JUND JASPAR yes 100033581
chr6 13454986 13454997 NFE2 JASPAR yes 100033582
chr6 13454987 13454996 JDP2 JASPAR yes 70316079
chr6 13454987 13454996 JDP2 JASPAR yes 100033583
chr6 13454987 13454998 FOSL2 JASPAR yes 70316080
chr6 13454987 13454998 JUNB JASPAR yes 70316081
chr6 13454987 13454998 FOSL2 JASPAR yes 100033584
chr6 13454987 13454998 JUNB JASPAR yes 100033585
chr6 13454987 13455001 JUN JASPAR yes 70316082
chr6 13454987 13455001 JUN JASPAR yes 100033586
chr6 13454995 13455014 CTCF JASPAR yes 70316083
chr6 13454995 13455014 CTCF JASPAR yes 100033587
chr6 13454996 13455011 ZIC3 JASPAR yes 70316084
chr6 13454996 13455011 ZIC4 JASPAR yes 70316085
chr6 13454996 13455011 ZIC3 JASPAR yes 100033588
chr6 13454996 13455011 ZIC4 JASPAR yes 100033589
chr6 13454997 13455011 ZIC1 JASPAR yes 70316086
chr6 13454997 13455011 ZIC1 JASPAR yes 100033590
chr6 13455000 13455009 SNAI2 JASPAR yes 70316087
chr6 13455000 13455009 SNAI2 JASPAR yes 100033591
chr6 13455006 13455018 NHLH1 JASPAR yes 70316088
chr6 13455006 13455018 NHLH1 JASPAR yes 100033592
chr6 13455007 13455017 NHLH1 JASPAR yes 70316089
chr6 13455007 13455017 NHLH1 JASPAR yes 100033593
chr6 13455013 13455018 TFAP2A TRANSFAC yes 70316090
chr6 13455013 13455018 TFAP2A TRANSFAC yes 100033594
chr6 13455013 13455019 MZF1 JASPAR yes 70316091
chr6 13455013 13455019 MZF1 JASPAR yes 100033595
chr6 13455018 13455034 SOX4 JASPAR yes 70316092
chr6 13455018 13455034 SOX4 JASPAR yes 100033596
chr6 13455022 13455026 NFE TRANSFAC yes 70316093
chr6 13455022 13455026 NFE TRANSFAC yes 100033597
chr6 13455022 13455029 MEIS1 JASPAR yes 70316094
chr6 13455022 13455029 MEIS1 JASPAR yes 100033598
SNP sites on vista50958[chr6:13454706-13455038]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13454715 rs150936286 C T no 8844625
chr6 13454841 rs2841563 C T
CTCF
8844626
chr6 13454945 rs184290733 C T
CTCF RAD21
8844627
chr6 13454982 rs115734031 C G
CTCF GATA2 JUN RAD21
8844628
Genes possibly regulated by vista50958[chr6:13454706-13455038]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 67144
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 68623
Expression level of Genes
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miRNAs possibly regulated by vista50958[chr6:13454706-13455038]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results