EnhancerDB
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  3. vista50959[chr6:13455271-13455432]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50959[chr6:13455271-13455432]
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Tissue distribution of vista50959
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Transcription factor that possibly regulate vista50959[chr6:13455271-13455432]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538605
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538606
chr6 13455161 13455471 BHLHE40 UCSC Txn Factor no Conserved 108538607
chr6 13455273 13455285 HLF JASPAR yes 70316095
chr6 13455273 13455285 JDP2 JASPAR yes 70316096
chr6 13455273 13455285 HLF JASPAR yes 100033626
chr6 13455273 13455285 JDP2 JASPAR yes 100033627
chr6 13455273 13455286 ATF4 JASPAR yes 70316097
chr6 13455273 13455286 ATF4 JASPAR yes 100033628
chr6 13455310 13455320 BHLHE40 JASPAR yes 70316098
chr6 13455310 13455320 CLOCK JASPAR yes 70316099
chr6 13455310 13455320 HEY1 JASPAR yes 70316100
chr6 13455310 13455320 MAX JASPAR yes 70316101
chr6 13455310 13455320 MNT JASPAR yes 70316102
chr6 13455310 13455320 BHLHE40 JASPAR yes 100033629
chr6 13455310 13455320 CLOCK JASPAR yes 100033630
chr6 13455310 13455320 HEY1 JASPAR yes 100033631
chr6 13455310 13455320 MAX JASPAR yes 100033632
chr6 13455310 13455320 MNT JASPAR yes 100033633
chr6 13455312 13455317 MYC TRANSFAC yes 70316103
chr6 13455312 13455317 USF1 TRANSFAC yes 70316104
chr6 13455312 13455317 USF2 TRANSFAC yes 70316105
chr6 13455312 13455317 MYC TRANSFAC yes 100033634
chr6 13455312 13455317 USF1 TRANSFAC yes 100033635
chr6 13455312 13455317 USF2 TRANSFAC yes 100033636
chr6 13455317 13455330 SMAD2 JASPAR yes 70316106
chr6 13455317 13455330 SMAD2 JASPAR yes 100033637
chr6 13455340 13455360 RREB1 JASPAR yes 70316107
chr6 13455340 13455360 RREB1 JASPAR yes 100033638
chr6 13455341 13455353 FOXI1 JASPAR yes 70316108
chr6 13455341 13455353 FOXI1 JASPAR yes 100033639
chr6 13455342 13455362 RREB1 JASPAR yes 70316109
chr6 13455342 13455362 RREB1 JASPAR yes 100033640
chr6 13455344 13455364 RREB1 JASPAR yes 70316110
chr6 13455344 13455364 RREB1 JASPAR yes 100033641
chr6 13455345 13455351 HiNF-A TRANSFAC yes 70316111
chr6 13455345 13455351 HiNF-A TRANSFAC yes 100033642
chr6 13455346 13455366 RREB1 JASPAR yes 70316112
chr6 13455346 13455366 RREB1 JASPAR yes 100033643
chr6 13455349 13455369 RREB1 JASPAR yes 70316113
chr6 13455349 13455369 RREB1 JASPAR yes 100033644
chr6 13455352 13455372 RREB1 JASPAR yes 70316114
chr6 13455352 13455372 RREB1 JASPAR yes 100033645
chr6 13455354 13455374 RREB1 JASPAR yes 70316115
chr6 13455354 13455374 RREB1 JASPAR yes 100033646
chr6 13455424 13455438 TLX1 JASPAR yes 70316116
chr6 13455424 13455438 TLX1 JASPAR yes 100033647
SNP sites on vista50959[chr6:13455271-13455432]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista50959[chr6:13455271-13455432]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 67538
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 69017
Expression level of Genes
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miRNAs possibly regulated by vista50959[chr6:13455271-13455432]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results