EnhancerDB
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  3. vista50960[chr6:13462093-13462464]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50960[chr6:13462093-13462464]
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Tissue distribution of vista50960
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Transcription factor that possibly regulate vista50960[chr6:13462093-13462464]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13462094 13462098 LFA1 TRANSFAC yes 70316117
chr6 13462094 13462098 LFA1 TRANSFAC yes 100034661
chr6 13462131 13462142 CEBPA JASPAR yes 70316118
chr6 13462131 13462142 CEBPA JASPAR yes 100034662
chr6 13462132 13462143 CEBPB JASPAR yes 70316119
chr6 13462132 13462143 CEBPB JASPAR yes 100034663
chr6 13462135 13462149 JUN JASPAR yes 70316120
chr6 13462135 13462149 JUN JASPAR yes 100034664
chr6 13462137 13462148 BATF JASPAR yes 70316121
chr6 13462137 13462148 BATF JASPAR yes 100034665
chr6 13462138 13462149 FOSL2 JASPAR yes 70316122
chr6 13462138 13462149 JUNB JASPAR yes 70316123
chr6 13462138 13462149 FOSL2 JASPAR yes 100034666
chr6 13462138 13462149 JUNB JASPAR yes 100034667
chr6 13462139 13462150 FOS JASPAR yes 70316124
chr6 13462139 13462150 FOSL1 JASPAR yes 70316125
chr6 13462139 13462150 JUND JASPAR yes 70316126
chr6 13462139 13462150 NFE2 JASPAR yes 70316127
chr6 13462139 13462150 FOS JASPAR yes 100034668
chr6 13462139 13462150 FOSL1 JASPAR yes 100034669
chr6 13462139 13462150 JUND JASPAR yes 100034670
chr6 13462139 13462150 NFE2 JASPAR yes 100034671
chr6 13462139 13462159 PPARG JASPAR yes 70316128
chr6 13462139 13462159 PPARG JASPAR yes 100034672
chr6 13462140 13462149 JDP2 JASPAR yes 70316129
chr6 13462140 13462149 JDP2 JASPAR yes 100034673
chr6 13462140 13462151 FOSL2 JASPAR yes 70316130
chr6 13462140 13462151 JUNB JASPAR yes 70316131
chr6 13462140 13462151 FOSL2 JASPAR yes 100034674
chr6 13462140 13462151 JUNB JASPAR yes 100034675
chr6 13462140 13462154 JUN JASPAR yes 70316132
chr6 13462140 13462154 JUN JASPAR yes 100034676
chr6 13462148 13462152 H1TF2 TRANSFAC yes 70316133
chr6 13462148 13462152 NFE TRANSFAC yes 70316134
chr6 13462148 13462152 SRF TRANSFAC yes 70316135
chr6 13462148 13462152 H1TF2 TRANSFAC yes 100034677
chr6 13462148 13462152 NFE TRANSFAC yes 100034678
chr6 13462148 13462152 SRF TRANSFAC yes 100034679
chr6 13462149 13462164 TFAP2A JASPAR yes 70316136
chr6 13462149 13462164 TFAP2A JASPAR yes 100034680
chr6 13462152 13462164 TFAP2A JASPAR yes 70316137
chr6 13462152 13462164 TFAP2B JASPAR yes 70316138
chr6 13462152 13462164 TFAP2C JASPAR yes 70316139
chr6 13462152 13462164 TFAP2A JASPAR yes 100034681
chr6 13462152 13462164 TFAP2B JASPAR yes 100034682
chr6 13462152 13462164 TFAP2C JASPAR yes 100034683
chr6 13462152 13462167 TFAP2A JASPAR yes 70316140
chr6 13462152 13462167 TFAP2C JASPAR yes 70316141
chr6 13462152 13462167 TFAP2A JASPAR yes 100034684
chr6 13462152 13462167 TFAP2C JASPAR yes 100034685
chr6 13462153 13462162 TFAP2A JASPAR yes 70316142
chr6 13462153 13462162 TFAP2A JASPAR yes 100034686
chr6 13462154 13462163 TFAP2A JASPAR yes 70316143
chr6 13462154 13462163 TFAP2A JASPAR yes 100034687
chr6 13462159 13462163 LFA1 TRANSFAC yes 70316144
chr6 13462159 13462163 LFA1 TRANSFAC yes 100034688
chr6 13462169 13462188 CTCF JASPAR yes 70316145
chr6 13462169 13462188 CTCF JASPAR yes 100034689
chr6 13462174 13462186 TAL1 JASPAR yes 70316146
chr6 13462174 13462186 TAL1 JASPAR yes 100034690
chr6 13462176 13462186 FIGLA JASPAR yes 70316147
chr6 13462176 13462186 FIGLA JASPAR yes 100034691
chr6 13462176 13462188 TAL1 JASPAR yes 70316148
chr6 13462176 13462188 TAL1 JASPAR yes 100034692
chr6 13462183 13462187 ESR1 TRANSFAC yes 70316149
chr6 13462183 13462187 ESR1 TRANSFAC yes 100034693
chr6 13462264 13462276 DBP JASPAR yes 70316150
chr6 13462264 13462276 HLF JASPAR yes 70316151
chr6 13462264 13462276 TEF JASPAR yes 70316152
chr6 13462264 13462276 DBP JASPAR yes 100034694
chr6 13462264 13462276 HLF JASPAR yes 100034695
chr6 13462264 13462276 TEF JASPAR yes 100034696
chr6 13462265 13462275 CEBPB JASPAR yes 70316153
chr6 13462265 13462275 CEBPD JASPAR yes 70316154
chr6 13462265 13462275 CEBPE JASPAR yes 70316155
chr6 13462265 13462275 CEBPG JASPAR yes 70316156
chr6 13462265 13462275 CEBPB JASPAR yes 100034697
chr6 13462265 13462275 CEBPD JASPAR yes 100034698
chr6 13462265 13462275 CEBPE JASPAR yes 100034699
chr6 13462265 13462275 CEBPG JASPAR yes 100034700
chr6 13462266 13462274 NF-IL6 TRANSFAC yes 70316157
chr6 13462266 13462274 NF-IL6 TRANSFAC yes 100034701
chr6 13462271 13462274 MYB TRANSFAC yes 70316158
chr6 13462271 13462274 MYB TRANSFAC yes 100034702
chr6 13462272 13462293 REST JASPAR yes 70316159
chr6 13462272 13462293 REST JASPAR yes 100034703
chr6 13462273 13462292 REST JASPAR yes 70316160
chr6 13462273 13462292 REST JASPAR yes 100034704
chr6 13462278 13462282 LFA1 TRANSFAC yes 70316161
chr6 13462278 13462282 LFA1 TRANSFAC yes 100034705
chr6 13462284 13462288 H4TF2 TRANSFAC yes 70316162
chr6 13462284 13462288 H4TF2 TRANSFAC yes 100034706
chr6 13462289 13462310 IRF1 JASPAR yes 70316163
chr6 13462289 13462310 IRF1 JASPAR yes 100034707
chr6 13462290 13462293 MYB TRANSFAC yes 70316164
chr6 13462290 13462293 MYB TRANSFAC yes 100034708
chr6 13462306 13462316 MAX JASPAR yes 70316165
chr6 13462306 13462316 MAX JASPAR yes 100034709
chr6 13462324 13462335 FLI1 JASPAR yes 70316166
chr6 13462324 13462335 FLI1 JASPAR yes 100034710
chr6 13462325 13462335 ETV6 JASPAR yes 70316167
chr6 13462325 13462335 ETV6 JASPAR yes 100034711
chr6 13462325 13462338 ELF1 JASPAR yes 70316168
chr6 13462325 13462338 ELF1 JASPAR yes 100034712
chr6 13462326 13462333 SPI1 JASPAR yes 70316169
chr6 13462326 13462333 SPI1 JASPAR yes 100034713
chr6 13462326 13462334 EHF JASPAR yes 70316170
chr6 13462326 13462334 EHF JASPAR yes 100034714
chr6 13462363 13462373 NFIA JASPAR yes 70316171
chr6 13462363 13462373 NFIA JASPAR yes 100034715
chr6 13462364 13462373 NFIX JASPAR yes 70316172
chr6 13462364 13462373 NFIX JASPAR yes 100034716
chr6 13462365 13462371 NFIC JASPAR yes 70316173
chr6 13462365 13462371 NFIC JASPAR yes 100034717
chr6 13462365 13462379 TLX1 JASPAR yes 70316174
chr6 13462365 13462379 TLX1 JASPAR yes 100034718
chr6 13462366 13462376 MAX JASPAR yes 70316175
chr6 13462366 13462376 MAX JASPAR yes 100034719
chr6 13462366 13462377 USF2 JASPAR yes 70316176
chr6 13462366 13462377 USF2 JASPAR yes 100034720
chr6 13462366 13462378 HES5 JASPAR yes 70316177
chr6 13462366 13462378 HES7 JASPAR yes 70316178
chr6 13462366 13462378 PKNOX2 JASPAR yes 70316179
chr6 13462366 13462378 HES5 JASPAR yes 100034721
chr6 13462366 13462378 HES7 JASPAR yes 100034722
chr6 13462366 13462378 PKNOX2 JASPAR yes 100034723
chr6 13462366 13462380 TLX1 JASPAR yes 70316180
chr6 13462366 13462380 TLX1 JASPAR yes 100034724
chr6 13462378 13462392 EBF1 JASPAR yes 70316181
chr6 13462378 13462392 EBF1 JASPAR yes 100034725
chr6 13462394 13462398 YY1 TRANSFAC yes 70316182
chr6 13462394 13462398 YY1 TRANSFAC yes 100034726
chr6 13462410 13462418 EHF JASPAR yes 70316183
chr6 13462410 13462418 EHF JASPAR yes 100034727
chr6 13462451 13462455 YY1 TRANSFAC yes 70316184
chr6 13462451 13462455 YY1 TRANSFAC yes 100034728
SNP sites on vista50960[chr6:13462093-13462464]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13462095 rs2560754 G A
LFA1
8844723
chr6 13462107 rs75904535 C T no 8844724
chr6 13462108 rs370191482 G A no 8844725
chr6 13462198 rs2841560 T C no 8844726
chr6 13462299 rs115413301 C T
IRF1
8844727
chr6 13462405 rs9367488 G A no 8844728
chr6 13462422 rs533956657 T C no 8844729
Genes possibly regulated by vista50960[chr6:13462093-13462464]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 74570
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 76049
Expression level of Genes
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miRNAs possibly regulated by vista50960[chr6:13462093-13462464]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results