EnhancerDB
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  3. vista50962[chr6:13527016-13527208]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50962[chr6:13527016-13527208]
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Tissue distribution of vista50962
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Transcription factor that possibly regulate vista50962[chr6:13527016-13527208]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13527016 13527027 FOXA1 JASPAR yes 70316258
chr6 13527016 13527027 FOXA1 JASPAR yes 100041485
chr6 13527018 13527029 FOXP2 JASPAR yes 70316259
chr6 13527018 13527029 FOXP2 JASPAR yes 100041486
chr6 13527019 13527027 FOXO3 JASPAR yes 70316260
chr6 13527019 13527027 FOXO3 JASPAR yes 100041487
chr6 13527020 13527027 FOXD2 JASPAR yes 70316261
chr6 13527020 13527027 FOXI1 JASPAR yes 70316262
chr6 13527020 13527027 FOXL1 JASPAR yes 70316263
chr6 13527020 13527027 FOXO4 JASPAR yes 70316264
chr6 13527020 13527027 FOXO6 JASPAR yes 70316265
chr6 13527020 13527027 FOXP3 JASPAR yes 70316266
chr6 13527020 13527027 FOXD2 JASPAR yes 100041488
chr6 13527020 13527027 FOXI1 JASPAR yes 100041489
chr6 13527020 13527027 FOXL1 JASPAR yes 100041490
chr6 13527020 13527027 FOXO4 JASPAR yes 100041491
chr6 13527020 13527027 FOXO6 JASPAR yes 100041492
chr6 13527020 13527027 FOXP3 JASPAR yes 100041493
chr6 13527020 13527028 FOXD1 JASPAR yes 70316267
chr6 13527020 13527028 FOXO3 JASPAR yes 70316268
chr6 13527020 13527028 FOXD1 JASPAR yes 100041494
chr6 13527020 13527028 FOXO3 JASPAR yes 100041495
chr6 13527036 13527051 MEF2A JASPAR yes 70316269
chr6 13527036 13527051 MEF2A JASPAR yes 100041496
chr6 13527037 13527052 MEF2C JASPAR yes 70316270
chr6 13527037 13527052 MEF2C JASPAR yes 100041497
chr6 13527039 13527049 MEF2A JASPAR yes 70316271
chr6 13527039 13527049 MEF2A JASPAR yes 100041498
chr6 13527040 13527044 YY1 TRANSFAC yes 70316272
chr6 13527040 13527044 YY1 TRANSFAC yes 100041499
chr6 13527043 13527057 PAX6 JASPAR yes 70316273
chr6 13527043 13527057 PAX6 JASPAR yes 100041500
chr6 13527061 13527072 JUND JASPAR yes 70316274
chr6 13527061 13527072 JUND JASPAR yes 100041501
chr6 13527087 13527091 LFA1 TRANSFAC yes 70316275
chr6 13527087 13527091 LFA1 TRANSFAC yes 100041502
chr6 13527089 13527100 FLI1 JASPAR yes 70316276
chr6 13527089 13527100 FLI1 JASPAR yes 100041503
chr6 13527095 13527105 NEUROG2 JASPAR yes 70316277
chr6 13527095 13527105 NEUROG2 JASPAR yes 100041504
chr6 13527095 13527107 TAL1 JASPAR yes 70316278
chr6 13527095 13527107 TAL1 JASPAR yes 100041505
chr6 13527099 13527105 YY1 JASPAR yes 70316279
chr6 13527099 13527105 YY1 JASPAR yes 100041506
chr6 13527104 13527120 SOX8 JASPAR yes 70316280
chr6 13527104 13527120 SOX8 JASPAR yes 100041507
chr6 13527113 13527124 CEBPB JASPAR yes 70316281
chr6 13527113 13527124 CEBPB JASPAR yes 100041508
chr6 13527114 13527125 CEBPA JASPAR yes 70316282
chr6 13527114 13527125 CEBPA JASPAR yes 100041509
chr6 13527120 13527123 MYB TRANSFAC yes 70316283
chr6 13527120 13527123 MYB TRANSFAC yes 100041510
chr6 13527120 13527135 FOXP1 JASPAR yes 70316284
chr6 13527120 13527135 FOXP1 JASPAR yes 100041511
chr6 13527120 13527141 IRF1 JASPAR yes 70316285
chr6 13527120 13527141 IRF1 JASPAR yes 100041512
chr6 13527123 13527138 FOXP1 JASPAR yes 70316286
chr6 13527123 13527138 FOXP1 JASPAR yes 100041513
chr6 13527124 13527139 FOXP1 JASPAR yes 70316287
chr6 13527124 13527139 FOXP1 JASPAR yes 100041514
chr6 13527125 13527140 FOXP1 JASPAR yes 70316288
chr6 13527125 13527140 FOXP1 JASPAR yes 100041515
chr6 13527126 13527141 FOXP1 JASPAR yes 70316289
chr6 13527126 13527141 FOXP1 JASPAR yes 100041516
chr6 13527126 13527147 IRF1 JASPAR yes 70316290
chr6 13527126 13527147 IRF1 JASPAR yes 100041517
chr6 13527127 13527142 FOXP1 JASPAR yes 70316291
chr6 13527127 13527142 FOXP1 JASPAR yes 100041518
chr6 13527128 13527143 FOXP1 JASPAR yes 70316292
chr6 13527128 13527143 FOXP1 JASPAR yes 100041519
chr6 13527128 13527149 IRF1 JASPAR yes 70316293
chr6 13527128 13527149 IRF1 JASPAR yes 100041520
chr6 13527129 13527144 FOXP1 JASPAR yes 70316294
chr6 13527129 13527144 FOXP1 JASPAR yes 100041521
chr6 13527143 13527153 POU6F2 JASPAR yes 70316295
chr6 13527143 13527153 POU6F2 JASPAR yes 100041522
chr6 13527156 13527160 YY1 TRANSFAC yes 70316296
chr6 13527156 13527160 YY1 TRANSFAC yes 100041523
chr6 13527160 13527170 FEV JASPAR yes 70316297
chr6 13527160 13527170 FEV JASPAR yes 100041524
chr6 13527162 13527168 ETS1 JASPAR yes 70316298
chr6 13527162 13527168 SPI1 JASPAR yes 70316299
chr6 13527162 13527168 ETS1 JASPAR yes 100041525
chr6 13527162 13527168 SPI1 JASPAR yes 100041526
chr6 13527174 13527188 TCF7L2 JASPAR yes 70316300
chr6 13527174 13527188 TCF7L2 JASPAR yes 100041527
chr6 13527174 13527189 LEF1 JASPAR yes 70316301
chr6 13527174 13527189 LEF1 JASPAR yes 100041528
chr6 13527178 13527184 TCF4 TRANSFAC yes 70316302
chr6 13527178 13527184 TCF4 TRANSFAC yes 100041529
chr6 13527187 13527194 JUN TRANSFAC yes 70316303
chr6 13527187 13527194 JUN TRANSFAC yes 100041530
chr6 13527199 13527209 SP1 JASPAR yes 70316304
chr6 13527199 13527209 SP1 JASPAR yes 100041531
chr6 13527200 13527205 SP1 TRANSFAC yes 70316305
chr6 13527200 13527205 SP1 TRANSFAC yes 100041532
SNP sites on vista50962[chr6:13527016-13527208]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13527126 rs398000527 GA G
FOXP1 IRF1
8845455
chr6 13527126 rs528066657 GA G
FOXP1 IRF1
8845456
chr6 13527126 rs58700824 GA G
FOXP1 IRF1
8845457
chr6 13527169 rs531239308 T G
FEV
8845458
Genes possibly regulated by vista50962[chr6:13527016-13527208]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 60878
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 59399
chr6 13574816 13614790 + SIRT5 ENSG00000124523.10 13574816 0.68 1.0 6168 52392
chr6 13615559 13632971 + NOL7 ENSG00000225921.2 13615559 0.87 0.99 6169 11649
chr6 13615728 13621126 - AL441883.1 ENSG00000268059.1 13621126 0.99 1.0 6170 6082
Expression level of Genes
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miRNAs possibly regulated by vista50962[chr6:13527016-13527208]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results