EnhancerDB
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  3. vista50963[chr6:13597663-13598060]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50963[chr6:13597663-13598060]
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Tissue distribution of vista50963
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Transcription factor that possibly regulate vista50963[chr6:13597663-13598060]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13597663 13597678 FOXP1 JASPAR yes 70316306
chr6 13597664 13597670 TBP TRANSFAC yes 70316307
chr6 13597664 13597679 FOXP1 JASPAR yes 70316308
chr6 13597664 13597685 IRF1 JASPAR yes 70316309
chr6 13597665 13597680 FOXP1 JASPAR yes 70316310
chr6 13597665 13597686 IRF1 JASPAR yes 70316311
chr6 13597666 13597681 FOXP1 JASPAR yes 70316312
chr6 13597666 13597687 IRF1 JASPAR yes 70316313
chr6 13597667 13597682 FOXP1 JASPAR yes 70316314
chr6 13597667 13597688 IRF1 JASPAR yes 70316315
chr6 13597668 13597683 FOXP1 JASPAR yes 70316316
chr6 13597668 13597689 IRF1 JASPAR yes 70316317
chr6 13597669 13597684 FOXP1 JASPAR yes 70316318
chr6 13597669 13597690 IRF1 JASPAR yes 70316319
chr6 13597670 13597685 FOXP1 JASPAR yes 70316320
chr6 13597670 13597691 IRF1 JASPAR yes 70316321
chr6 13597671 13597686 FOXP1 JASPAR yes 70316322
chr6 13597672 13597687 FOXP1 JASPAR yes 70316323
chr6 13597674 13597695 IRF1 JASPAR yes 70316324
chr6 13597678 13597692 SPI1 JASPAR yes 70316325
chr6 13597678 13597692 SPIC JASPAR yes 70316326
chr6 13597683 13597688 ETS2 TRANSFAC yes 70316327
chr6 13597693 13597706 POU3F3 JASPAR yes 70316328
chr6 13597694 13597706 POU3F2 JASPAR yes 70316329
chr6 13597697 13597703 NFIC JASPAR yes 70316330
chr6 13597699 13597703 H1TF2 TRANSFAC yes 70316331
chr6 13597699 13597703 NFE TRANSFAC yes 70316332
chr6 13597699 13597703 SRF TRANSFAC yes 70316333
chr6 13597718 13597722 YY1 TRANSFAC yes 70316334
chr6 13597735 13597739 TEAD2 TRANSFAC yes 70316335
chr6 13597737 13597740 MYB TRANSFAC yes 70316336
chr6 13597742 13597752 ALX3 JASPAR yes 70316337
chr6 13597743 13597751 BSX JASPAR yes 70316338
chr6 13597743 13597751 DLX6 JASPAR yes 70316339
chr6 13597743 13597751 MSX1 JASPAR yes 70316340
chr6 13597743 13597751 MSX2 JASPAR yes 70316341
chr6 13597743 13597756 DUXA JASPAR yes 70316342
chr6 13597744 13597755 DUX4 JASPAR yes 70316343
chr6 13597744 13597755 PHOX2A JASPAR yes 70316344
chr6 13597744 13597755 PROP1 JASPAR yes 70316345
chr6 13597755 13597775 RREB1 JASPAR yes 70316346
chr6 13597762 13597768 TCF4 TRANSFAC yes 70316347
chr6 13597766 13597781 FOXA1 JASPAR yes 70316348
chr6 13597767 13597779 FOXI1 JASPAR yes 70316349
chr6 13597767 13597782 FOXP1 JASPAR yes 70316350
chr6 13597768 13597779 FOXP2 JASPAR yes 70316351
chr6 13597768 13597780 FOXC2 JASPAR yes 70316352
chr6 13597768 13597782 FOXF2 JASPAR yes 70316353
chr6 13597769 13597777 FOXG1 JASPAR yes 70316354
chr6 13597770 13597781 FOXA1 JASPAR yes 70316355
chr6 13597770 13597781 FOXH1 JASPAR yes 70316356
chr6 13597770 13597791 IRF1 JASPAR yes 70316357
chr6 13597774 13597778 YY1 TRANSFAC yes 70316358
chr6 13597775 13597796 IRF1 JASPAR yes 70316359
chr6 13597779 13597783 YY1 TRANSFAC yes 70316360
chr6 13597781 13597796 FOXP1 JASPAR yes 70316361
chr6 13597782 13597794 FOXC2 JASPAR yes 70316362
chr6 13597784 13597788 YY1 TRANSFAC yes 70316363
chr6 13597800 13597810 RELA JASPAR yes 70316364
chr6 13597811 13597815 NFE TRANSFAC yes 70316365
chr6 13597826 13597844 RARA JASPAR yes 70316366
chr6 13597844 13597858 TLX1 JASPAR yes 70316367
chr6 13597844 13597862 ESR2 JASPAR yes 70316368
chr6 13597845 13597862 ESR1 JASPAR yes 70316369
chr6 13597848 13597869 ZNF263 JASPAR yes 70316370
chr6 13597856 13597875 CTCF JASPAR yes 70316371
chr6 13597910 13597918 RHOXF1 JASPAR yes 70316372
chr6 13597939 13597951 MEF2D JASPAR yes 70316373
chr6 13597941 13597945 YY1 TRANSFAC yes 70316374
chr6 13597947 13597962 FOXP1 JASPAR yes 70316375
chr6 13597947 13597962 MEF2C JASPAR yes 70316376
chr6 13597968 13597980 HLF JASPAR yes 70316377
chr6 13597970 13597981 YY2 JASPAR yes 70316378
chr6 13597971 13597983 YY1 JASPAR yes 70316379
chr6 13598000 13598013 NR2F1 JASPAR yes 70316380
chr6 13598004 13598012 CREB1 JASPAR yes 70316381
chr6 13598016 13598022 ZNF354C JASPAR yes 70316382
SNP sites on vista50963[chr6:13597663-13598060]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13597665 rs60503838 TA T
FOXP1 IRF1 TBP
8845798
chr6 13597665 rs796250093 TA T
FOXP1 IRF1 TBP
8845799
chr6 13597745 rs114947905 T C
ALX3 BSX DLX6 DUX4 DUXA MSX1 MSX2 PHOX2A PROP1
8845800
chr6 13597772 rs141284695 GTTTAT G
FOXA1 FOXC2 FOXF2 FOXG1 FOXH1 FOXI1 FOXP1 FOXP2 IRF1 RREB1
8845801
chr6 13597786 rs189286563 A T
FOXC2 FOXP1 IRF1 YY1
8845802
chr6 13597813 rs552401711 TGTCACCCAGGCTGGA T
NFE
8845803
chr6 13597830 rs12192310 T C
RARA
8845804
chr6 13597923 rs145735064 G A no 8845805
chr6 13597934 rs141549862 C T no 8845806
chr6 13597935 rs186257943 G A no 8845807
chr6 13597997 rs147026380 C T no 8845808
Genes possibly regulated by vista50963[chr6:13597663-13598060]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13574816 13614790 + SIRT5 ENSG00000124523.10 13574816 0.68 1.0 6168 77153
chr6 13615559 13632971 + NOL7 ENSG00000225921.2 13615559 0.87 0.99 6169 82501
chr6 13615728 13621126 - AL441883.1 ENSG00000268059.1 13621126 0.99 1.0 6170 76934
Expression level of Genes
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miRNAs possibly regulated by vista50963[chr6:13597663-13598060]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results