EnhancerDB
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  3. vista50966[chr6:13636617-13636971]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50966[chr6:13636617-13636971]
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Tissue distribution of vista50966
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Transcription factor that possibly regulate vista50966[chr6:13636617-13636971]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13636554 13636835 STAT3 UCSC Txn Factor no Conserved 108538608
chr6 13636617 13636631 RXRB JASPAR yes 70316478
chr6 13636617 13636631 RXRG JASPAR yes 70316479
chr6 13636620 13636626 TCF1 TRANSFAC yes 70316480
chr6 13636628 13636643 PRDM1 JASPAR yes 70316481
chr6 13636630 13636651 IRF1 JASPAR yes 70316482
chr6 13636632 13636647 PRDM1 JASPAR yes 70316483
chr6 13636633 13636647 SPIC JASPAR yes 70316484
chr6 13636655 13636661 SOX10 JASPAR yes 70316485
chr6 13636656 13636670 SPI1 JASPAR yes 70316486
chr6 13636661 13636668 PEA3 TRANSFAC yes 70316487
chr6 13636681 13636691 GABPA JASPAR yes 70316488
chr6 13636683 13636689 ETS1 JASPAR yes 70316489
chr6 13636683 13636689 SPI1 JASPAR yes 70316490
chr6 13636698 13636709 STAT1 JASPAR yes 70316491
chr6 13636698 13636709 STAT3 JASPAR yes 70316492
chr6 13636711 13636726 MEF2A JASPAR yes 70316493
chr6 13636712 13636724 MEF2A JASPAR yes 70316494
chr6 13636726 13636734 FOXO3 JASPAR yes 70316495
chr6 13636733 13636744 ELK4 JASPAR yes 70316496
chr6 13636733 13636744 FLI1 JASPAR yes 70316497
chr6 13636733 13636746 ELF3 JASPAR yes 70316498
chr6 13636734 13636745 ELF5 JASPAR yes 70316499
chr6 13636734 13636746 EHF JASPAR yes 70316500
chr6 13636734 13636747 ELF1 JASPAR yes 70316501
chr6 13636735 13636742 SPI1 JASPAR yes 70316502
chr6 13636735 13636743 EHF JASPAR yes 70316503
chr6 13636735 13636743 FEV JASPAR yes 70316504
chr6 13636749 13636754 GATA2 JASPAR yes 70316505
chr6 13636803 13636809 NFIC JASPAR yes 70316506
chr6 13636816 13636826 CUX1 JASPAR yes 70316507
chr6 13636816 13636826 CUX2 JASPAR yes 70316508
chr6 13636833 13636837 H1TF2 TRANSFAC yes 70316509
chr6 13636833 13636837 NFE TRANSFAC yes 70316510
chr6 13636833 13636837 SRF TRANSFAC yes 70316511
chr6 13636839 13636843 YY1 TRANSFAC yes 70316512
chr6 13636846 13636850 TEAD2 TRANSFAC yes 70316513
chr6 13636846 13636851 TBP TRANSFAC yes 70316514
chr6 13636862 13636869 NKX3-1 JASPAR yes 70316515
chr6 13636867 13636870 MYB TRANSFAC yes 70316516
chr6 13636877 13636881 YY1 TRANSFAC yes 70316517
chr6 13636883 13636898 MEF2A JASPAR yes 70316518
chr6 13636884 13636899 MEF2C JASPAR yes 70316519
chr6 13636885 13636897 MEF2A JASPAR yes 70316520
chr6 13636885 13636897 MEF2B JASPAR yes 70316521
chr6 13636885 13636897 MEF2D JASPAR yes 70316522
chr6 13636886 13636896 MEF2A JASPAR yes 70316523
chr6 13636887 13636891 YY1 TRANSFAC yes 70316524
chr6 13636898 13636902 TEAD2 TRANSFAC yes 70316525
chr6 13636901 13636914 POU3F3 JASPAR yes 70316526
chr6 13636903 13636907 YY1 TRANSFAC yes 70316527
chr6 13636903 13636917 ONECUT2 JASPAR yes 70316528
chr6 13636903 13636917 ONECUT3 JASPAR yes 70316529
chr6 13636916 13636920 YY1 TRANSFAC yes 70316530
chr6 13636917 13636927 NFATC3 JASPAR yes 70316531
chr6 13636918 13636925 NFATC2 JASPAR yes 70316532
chr6 13636922 13636926 H1TF2 TRANSFAC yes 70316533
chr6 13636922 13636926 NFE TRANSFAC yes 70316534
chr6 13636922 13636926 SRF TRANSFAC yes 70316535
SNP sites on vista50966[chr6:13636617-13636971]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13636826 rs201970605 AT A
CUX1 CUX2 STAT3
8845923
chr6 13636943 rs76243851 T C no 8845924
Genes possibly regulated by vista50966[chr6:13636617-13636971]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13574816 13614790 + SIRT5 ENSG00000124523.10 13574816 0.68 1.0 6168 38199
chr6 13615559 13632971 + NOL7 ENSG00000225921.2 13615559 0.87 0.99 6169 78942
chr6 13615728 13621126 - AL441883.1 ENSG00000268059.1 13621126 0.99 1.0 6170 84509
chr6 13621730 13711796 - RANBP9 ENSG00000010017.9 13711796 0.64 0.99 6171 25175
Expression level of Genes
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miRNAs possibly regulated by vista50966[chr6:13636617-13636971]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results