EnhancerDB
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  3. vista50969[chr6:13662469-13662838]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50969[chr6:13662469-13662838]
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Tissue distribution of vista50969
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Transcription factor that possibly regulate vista50969[chr6:13662469-13662838]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13662480 13662486 SOX10 JASPAR yes 70316623
chr6 13662483 13662488 ETS2 TRANSFAC yes 70316624
chr6 13662496 13662501 GATA2 JASPAR yes 70316625
chr6 13662529 13662543 TLX1 JASPAR yes 70316626
chr6 13662541 13662554 ZBTB18 JASPAR yes 70316627
chr6 13662636 13662649 HSF2 JASPAR yes 70316628
chr6 13662646 13662667 IRF1 JASPAR yes 70316629
chr6 13662654 13662668 ONECUT1 JASPAR yes 70316630
chr6 13662654 13662668 ONECUT2 JASPAR yes 70316631
chr6 13662654 13662668 ONECUT3 JASPAR yes 70316632
chr6 13662656 13662668 FOXC2 JASPAR yes 70316633
chr6 13662657 13662667 CUX2 JASPAR yes 70316634
chr6 13662659 13662670 HOXA10 JASPAR yes 70316635
chr6 13662660 13662670 HOXB13 JASPAR yes 70316636
chr6 13662660 13662670 HOXD13 JASPAR yes 70316637
chr6 13662672 13662689 ZNF410 JASPAR yes 70316638
chr6 13662723 13662741 SRF JASPAR yes 70316639
chr6 13662724 13662728 H4TF2 TRANSFAC yes 70316640
chr6 13662725 13662741 SRF JASPAR yes 70316641
chr6 13662725 13662743 SRF JASPAR yes 70316642
chr6 13662726 13662738 SRF JASPAR yes 70316643
chr6 13662728 13662740 SRF JASPAR yes 70316644
chr6 13662738 13662755 ZNF410 JASPAR yes 70316645
chr6 13662752 13662757 SP1 TRANSFAC yes 70316646
chr6 13662753 13662770 RARA JASPAR yes 70316647
chr6 13662764 13662779 ESR2 JASPAR yes 70316648
chr6 13662764 13662781 RXRA JASPAR yes 70316649
chr6 13662765 13662769 ESR1 TRANSFAC yes 70316650
chr6 13662783 13662795 TEAD1 JASPAR yes 70316651
chr6 13662801 13662813 SRF JASPAR yes 70316652
chr6 13662804 13662813 CDX1 JASPAR yes 70316653
chr6 13662804 13662814 HOXA13 JASPAR yes 70316654
chr6 13662804 13662814 HOXB13 JASPAR yes 70316655
chr6 13662804 13662814 HOXD13 JASPAR yes 70316656
chr6 13662814 13662834 TP63 JASPAR yes 70316657
chr6 13662815 13662833 TP73 JASPAR yes 70316658
SNP sites on vista50969[chr6:13662469-13662838]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13662603 rs180761376 G C no 8845986
chr6 13662693 rs188383262 G A no 8845987
chr6 13662724 rs138188485 C T
H4TF2 SRF
8845988
chr6 13662818 rs144014512 C T
TP63 TP73
8845989
Genes possibly regulated by vista50969[chr6:13662469-13662838]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13574816 13614790 + SIRT5 ENSG00000124523.10 13574816 0.68 1.0 6168 12347
chr6 13615559 13632971 + NOL7 ENSG00000225921.2 13615559 0.87 0.99 6169 53090
chr6 13615728 13621126 - AL441883.1 ENSG00000268059.1 13621126 0.99 1.0 6170 58657
chr6 13621730 13711796 - RANBP9 ENSG00000010017.9 13711796 0.64 0.99 6171 51042
Expression level of Genes
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miRNAs possibly regulated by vista50969[chr6:13662469-13662838]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results