EnhancerDB
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  3. vista50971[chr6:13709903-13710182]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50971[chr6:13709903-13710182]
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Tissue distribution of vista50971
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Transcription factor that possibly regulate vista50971[chr6:13709903-13710182]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13709912 13709925 HSF1 JASPAR yes 70316725
chr6 13709925 13709940 MEF2A JASPAR yes 70316726
chr6 13709926 13709941 MEF2C JASPAR yes 70316727
chr6 13709929 13709933 YY1 TRANSFAC yes 70316728
chr6 13709946 13709960 E2F7 JASPAR yes 70316729
chr6 13709960 13709964 YY1 TRANSFAC yes 70316730
chr6 13709969 13709974 H4TF1 TRANSFAC yes 70316731
chr6 13709992 13710008 POU4F2 JASPAR yes 70316732
chr6 13709994 13710009 HNF1A JASPAR yes 70316733
chr6 13709995 13710007 HNF1B JASPAR yes 70316734
chr6 13709995 13710008 HNF1B JASPAR yes 70316735
chr6 13710004 13710007 MYB TRANSFAC yes 70316736
chr6 13710004 13710015 PROP1 JASPAR yes 70316737
chr6 13710008 13710015 NKX3-1 JASPAR yes 70316738
chr6 13710037 13710053 SRF JASPAR yes 70316739
chr6 13710043 13710047 TEAD2 TRANSFAC yes 70316740
chr6 13710058 13710061 MYB TRANSFAC yes 70316741
chr6 13710058 13710067 RUNX2 JASPAR yes 70316742
chr6 13710058 13710068 RUNX3 JASPAR yes 70316743
chr6 13710058 13710069 RUNX1 JASPAR yes 70316744
chr6 13710067 13710079 FOXI1 JASPAR yes 70316745
chr6 13710067 13710081 GATA2 JASPAR yes 70316746
chr6 13710067 13710082 FOXP1 JASPAR yes 70316747
chr6 13710068 13710079 FOXP2 JASPAR yes 70316748
chr6 13710069 13710077 FOXG1 JASPAR yes 70316749
chr6 13710069 13710077 FOXO3 JASPAR yes 70316750
chr6 13710071 13710079 GATA3 JASPAR yes 70316751
chr6 13710118 13710134 NFYA JASPAR yes 70316752
chr6 13710119 13710137 NFYA JASPAR yes 70316753
chr6 13710123 13710127 H1TF2 TRANSFAC yes 70316754
chr6 13710123 13710127 NFE TRANSFAC yes 70316755
chr6 13710123 13710127 SRF TRANSFAC yes 70316756
chr6 13710154 13710168 SPI1 JASPAR yes 70316757
chr6 13710156 13710176 RREB1 JASPAR yes 70316758
chr6 13710172 13710177 SP1 TRANSFAC yes 70316759
SNP sites on vista50971[chr6:13709903-13710182]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13709938 rs561838140 T C
MEF2A MEF2C
8846391
chr6 13710021 rs150503280 C A no 8846392
chr6 13710070 rs112159299 T A,C
FOXG1 FOXI1 FOXO3 FOXP1 FOXP2 GATA2
8846393
chr6 13710124 rs566426477 C T
H1TF2 NFE NFYA SRF
8846394
Genes possibly regulated by vista50971[chr6:13709903-13710182]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13615559 13632971 + NOL7 ENSG00000225921.2 13615559 0.87 0.99 6169 5656
chr6 13615728 13621126 - AL441883.1 ENSG00000268059.1 13621126 0.99 1.0 6170 11223
chr6 13621730 13711796 - RANBP9 ENSG00000010017.9 13711796 0.64 0.99 6171 98386
Expression level of Genes
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miRNAs possibly regulated by vista50971[chr6:13709903-13710182]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results