EnhancerDB
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  3. vista50978[chr6:14075513-14075713]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50978[chr6:14075513-14075713]
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Tissue distribution of vista50978
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Transcription factor that possibly regulate vista50978[chr6:14075513-14075713]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 14075454 14075810 IRF1 UCSC Txn Factor no Conserved 108538614
chr6 14075505 14075514 PITX3 JASPAR yes 70317034
chr6 14075505 14075514 PITX3 JASPAR yes 100078196
chr6 14075505 14075515 GSC2 JASPAR yes 70317035
chr6 14075505 14075515 GSC JASPAR yes 70317036
chr6 14075505 14075515 GSC2 JASPAR yes 100078197
chr6 14075505 14075515 GSC JASPAR yes 100078198
chr6 14075506 14075514 OTX1 JASPAR yes 70317037
chr6 14075506 14075514 OTX1 JASPAR yes 100078199
chr6 14075532 14075538 MYC TRANSFAC yes 70317038
chr6 14075532 14075538 MYC TRANSFAC yes 100078200
chr6 14075557 14075565 OTX2 JASPAR yes 70317039
chr6 14075557 14075565 OTX2 JASPAR yes 100078201
chr6 14075562 14075566 YY1 TRANSFAC yes 70317040
chr6 14075562 14075566 YY1 TRANSFAC yes 100078202
chr6 14075582 14075593 HOXC13 JASPAR yes 70317041
chr6 14075582 14075593 HOXC13 JASPAR yes 100078203
chr6 14075585 14075588 MYB TRANSFAC yes 70317042
chr6 14075585 14075588 MYB TRANSFAC yes 100078204
chr6 14075611 14075629 IRF2 JASPAR yes 70317043
chr6 14075611 14075629 IRF2 JASPAR yes 100078205
chr6 14075612 14075633 IRF1 JASPAR yes 70317044
chr6 14075612 14075633 IRF1 JASPAR yes 100078206
chr6 14075614 14075629 STAT2 JASPAR yes 70317045
chr6 14075614 14075629 STAT2 JASPAR yes 100078207
chr6 14075615 14075629 STAT1 JASPAR yes 70317046
chr6 14075615 14075629 STAT1 JASPAR yes 100078208
chr6 14075616 14075628 IRF1 JASPAR yes 70317047
chr6 14075616 14075628 IRF1 JASPAR yes 100078209
chr6 14075616 14075630 IRF7 JASPAR yes 70317048
chr6 14075616 14075630 IRF8 JASPAR yes 70317049
chr6 14075616 14075630 IRF7 JASPAR yes 100078210
chr6 14075616 14075630 IRF8 JASPAR yes 100078211
chr6 14075616 14075631 IRF9 JASPAR yes 70317050
chr6 14075616 14075631 IRF9 JASPAR yes 100078212
chr6 14075620 14075635 PRDM1 JASPAR yes 70317051
chr6 14075620 14075635 PRDM1 JASPAR yes 100078213
chr6 14075621 14075625 YY1 TRANSFAC yes 70317052
chr6 14075621 14075625 YY1 TRANSFAC yes 100078214
chr6 14075649 14075664 NFYB JASPAR yes 70317053
chr6 14075649 14075664 NFYB JASPAR yes 100078215
chr6 14075651 14075656 NFY TRANSFAC yes 70317054
chr6 14075651 14075656 NFY TRANSFAC yes 100078216
chr6 14075655 14075665 NFKB1 JASPAR yes 70317055
chr6 14075655 14075665 RELA JASPAR yes 70317056
chr6 14075655 14075665 REL JASPAR yes 70317057
chr6 14075655 14075665 NFKB1 JASPAR yes 100078217
chr6 14075655 14075665 RELA JASPAR yes 100078218
chr6 14075655 14075665 REL JASPAR yes 100078219
chr6 14075655 14075666 NFKB1 JASPAR yes 70317058
chr6 14075655 14075666 NFKB1 JASPAR yes 100078220
chr6 14075656 14075660 LFA1 TRANSFAC yes 70317059
chr6 14075656 14075660 LFA1 TRANSFAC yes 100078221
chr6 14075658 14075666 TEAD3 JASPAR yes 70317060
chr6 14075658 14075666 TEAD3 JASPAR yes 100078222
chr6 14075662 14075683 IRF1 JASPAR yes 70317061
chr6 14075662 14075683 IRF1 JASPAR yes 100078223
SNP sites on vista50978[chr6:14075513-14075713]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 14075513 rs9464650 C A
GSC GSC2 IRF1 OTX1 PITX3
8849104
chr6 14075689 rs192341162 G A
IRF1
8849105
chr6 14075713 rs147415558 G A
IRF1
8849106
Genes possibly regulated by vista50978[chr6:14075513-14075713]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 14117872 14137149 + CD83 ENSG00000112149.5 14117872 0.86 0.99 6174 57841
Expression level of Genes
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miRNAs possibly regulated by vista50978[chr6:14075513-14075713]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results