EnhancerDB
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  3. vista5104[chr1:218546684-218546887]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5104[chr1:218546684-218546887]
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Tissue distribution of vista5104
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Transcription factor that possibly regulate vista5104[chr1:218546684-218546887]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 218546679 218546699 RREB1 JASPAR yes 35372735
chr1 218546679 218546699 RREB1 JASPAR yes 118458718
chr1 218546695 218546699 LFA1 TRANSFAC yes 35372736
chr1 218546695 218546699 LFA1 TRANSFAC yes 118458719
chr1 218546700 218546706 ZNF354C JASPAR yes 35372737
chr1 218546700 218546706 ZNF354C JASPAR yes 118458720
chr1 218546707 218546711 NFE TRANSFAC yes 35372738
chr1 218546707 218546711 NFE TRANSFAC yes 118458721
chr1 218546715 218546719 TEAD2 TRANSFAC yes 35372739
chr1 218546715 218546719 TEAD2 TRANSFAC yes 118458722
chr1 218546715 218546724 SRY JASPAR yes 35372740
chr1 218546715 218546724 SRY JASPAR yes 118458723
chr1 218546715 218546726 FOXC1 JASPAR yes 35372741
chr1 218546715 218546726 FOXC1 JASPAR yes 118458724
chr1 218546717 218546720 MYB TRANSFAC yes 35372742
chr1 218546717 218546720 MYB TRANSFAC yes 118458725
chr1 218546737 218546751 JUN JASPAR yes 35372743
chr1 218546737 218546751 JUN JASPAR yes 118458726
chr1 218546739 218546750 BATF JASPAR yes 35372744
chr1 218546739 218546750 BATF JASPAR yes 118458727
chr1 218546740 218546751 JUNB JASPAR yes 35372745
chr1 218546740 218546751 JUNB JASPAR yes 118458728
chr1 218546741 218546752 JUND JASPAR yes 35372746
chr1 218546741 218546752 JUND JASPAR yes 118458729
chr1 218546742 218546751 JDP2 JASPAR yes 35372747
chr1 218546742 218546751 JDP2 JASPAR yes 118458730
chr1 218546747 218546758 PHOX2A JASPAR yes 35372748
chr1 218546747 218546758 PROP1 JASPAR yes 35372749
chr1 218546747 218546758 PHOX2A JASPAR yes 118458731
chr1 218546747 218546758 PROP1 JASPAR yes 118458732
chr1 218546759 218546770 PHOX2A JASPAR yes 35372750
chr1 218546759 218546770 PROP1 JASPAR yes 35372751
chr1 218546759 218546770 PHOX2A JASPAR yes 118458733
chr1 218546759 218546770 PROP1 JASPAR yes 118458734
chr1 218546773 218546787 JUN JASPAR yes 35372752
chr1 218546773 218546787 JUN JASPAR yes 118458735
chr1 218546775 218546786 BATF JASPAR yes 35372753
chr1 218546775 218546786 BATF JASPAR yes 118458736
chr1 218546776 218546787 JUNB JASPAR yes 35372754
chr1 218546776 218546787 JUNB JASPAR yes 118458737
chr1 218546777 218546788 JUND JASPAR yes 35372755
chr1 218546777 218546788 JUND JASPAR yes 118458738
chr1 218546778 218546787 JDP2 JASPAR yes 35372756
chr1 218546778 218546787 JDP2 JASPAR yes 118458739
chr1 218546783 218546794 PHOX2A JASPAR yes 35372757
chr1 218546783 218546794 PROP1 JASPAR yes 35372758
chr1 218546783 218546794 PHOX2A JASPAR yes 118458740
chr1 218546783 218546794 PROP1 JASPAR yes 118458741
chr1 218546795 218546806 PHOX2A JASPAR yes 35372759
chr1 218546795 218546806 PROP1 JASPAR yes 35372760
chr1 218546795 218546806 PHOX2A JASPAR yes 118458742
chr1 218546795 218546806 PROP1 JASPAR yes 118458743
chr1 218546808 218546812 TEAD2 TRANSFAC yes 35372761
chr1 218546808 218546812 TEAD2 TRANSFAC yes 118458744
chr1 218546810 218546821 PHOX2A JASPAR yes 35372762
chr1 218546810 218546821 PROP1 JASPAR yes 35372763
chr1 218546810 218546821 PHOX2A JASPAR yes 118458745
chr1 218546810 218546821 PROP1 JASPAR yes 118458746
chr1 218546814 218546827 DUXA JASPAR yes 35372764
chr1 218546814 218546827 DUXA JASPAR yes 118458747
chr1 218546815 218546826 PROP1 JASPAR yes 35372765
chr1 218546815 218546826 PROP1 JASPAR yes 118458748
chr1 218546834 218546843 SRY JASPAR yes 35372766
chr1 218546834 218546843 SRY JASPAR yes 118458749
chr1 218546848 218546851 MYB TRANSFAC yes 35372767
chr1 218546848 218546851 MYB TRANSFAC yes 118458750
chr1 218546851 218546855 NFE TRANSFAC yes 35372768
chr1 218546851 218546855 NFE TRANSFAC yes 118458751
chr1 218546885 218546895 GSC JASPAR yes 35372769
chr1 218546885 218546895 GSC JASPAR yes 118458752
chr1 218546886 218546900 POU1F1 JASPAR yes 35372770
chr1 218546886 218546900 POU1F1 JASPAR yes 118458753
chr1 218546887 218546899 POU3F1 JASPAR yes 35372771
chr1 218546887 218546899 POU3F2 JASPAR yes 35372772
chr1 218546887 218546899 POU3F1 JASPAR yes 118458754
chr1 218546887 218546899 POU3F2 JASPAR yes 118458755
chr1 218546887 218546900 POU3F3 JASPAR yes 35372773
chr1 218546887 218546900 POU3F3 JASPAR yes 118458756
SNP sites on vista5104[chr1:218546684-218546887]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 218546808 rs1538926 T C
TEAD2
948562
chr1 218546846 rs149219173 TACTA T no 948563
Genes possibly regulated by vista5104[chr1:218546684-218546887]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 218458629 218511325 + RRP15 ENSG00000067533.5 218458629 0.79 0.98 1848 11945
chr1 218519577 218617961 + TGFB2 ENSG00000092969.7 218519577 0.83 0.97 1849 72893
Expression level of Genes
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miRNAs possibly regulated by vista5104[chr1:218546684-218546887]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results