EnhancerDB
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  3. vista5111[chr1:218648559-218648794]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5111[chr1:218648559-218648794]
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Tissue distribution of vista5111
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Transcription factor that possibly regulate vista5111[chr1:218648559-218648794]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 218648579 218648589 HMBOX1 JASPAR yes 35383556
chr1 218648579 218648589 HMBOX1 JASPAR yes 118459089
chr1 218648583 218648593 NKX2-3 JASPAR yes 35383557
chr1 218648583 218648593 NKX2-3 JASPAR yes 118459090
chr1 218648584 218648592 ISL2 JASPAR yes 35383558
chr1 218648584 218648592 ISL2 JASPAR yes 118459091
chr1 218648584 218648593 NKX3-2 JASPAR yes 35383559
chr1 218648584 218648593 NKX3-2 JASPAR yes 118459092
chr1 218648641 218648659 ESR1 JASPAR yes 35383560
chr1 218648641 218648659 ESR1 JASPAR yes 118459093
chr1 218648652 218648655 MYB TRANSFAC yes 35383561
chr1 218648652 218648655 MYB TRANSFAC yes 118459094
chr1 218648652 218648666 NR2F1 JASPAR yes 35383562
chr1 218648652 218648666 RXRG JASPAR yes 35383563
chr1 218648652 218648666 NR2F1 JASPAR yes 118459095
chr1 218648652 218648666 RXRG JASPAR yes 118459096
chr1 218648659 218648671 HES5 JASPAR yes 35383564
chr1 218648659 218648671 PKNOX1 JASPAR yes 35383565
chr1 218648659 218648671 PKNOX2 JASPAR yes 35383566
chr1 218648659 218648671 TGIF1 JASPAR yes 35383567
chr1 218648659 218648671 TGIF2 JASPAR yes 35383568
chr1 218648659 218648671 HES5 JASPAR yes 118459097
chr1 218648659 218648671 PKNOX1 JASPAR yes 118459098
chr1 218648659 218648671 PKNOX2 JASPAR yes 118459099
chr1 218648659 218648671 TGIF1 JASPAR yes 118459100
chr1 218648659 218648671 TGIF2 JASPAR yes 118459101
chr1 218648660 218648670 NKX2-3 JASPAR yes 35383569
chr1 218648660 218648670 NKX2-3 JASPAR yes 118459102
chr1 218648727 218648738 HOXC13 JASPAR yes 35383570
chr1 218648727 218648738 HOXC13 JASPAR yes 118459103
chr1 218648728 218648738 HOXC10 JASPAR yes 35383571
chr1 218648728 218648738 HOXC10 JASPAR yes 118459104
chr1 218648742 218648758 POU4F2 JASPAR yes 35383572
chr1 218648742 218648758 POU4F2 JASPAR yes 118459105
chr1 218648778 218648797 CTCF JASPAR yes 35383573
chr1 218648778 218648797 CTCF JASPAR yes 118459106
chr1 218648787 218648793 YY1 JASPAR yes 35383574
chr1 218648787 218648793 YY1 JASPAR yes 118459107
chr1 218648792 218648807 MEF2A JASPAR yes 35383575
chr1 218648792 218648807 MEF2A JASPAR yes 118459108
chr1 218648793 218648808 MEF2C JASPAR yes 35383576
chr1 218648793 218648808 MEF2C JASPAR yes 118459109
chr1 218648794 218648806 MEF2A JASPAR yes 35383577
chr1 218648794 218648806 MEF2B JASPAR yes 35383578
chr1 218648794 218648806 MEF2D JASPAR yes 35383579
chr1 218648794 218648806 MEF2A JASPAR yes 118459110
chr1 218648794 218648806 MEF2B JASPAR yes 118459111
chr1 218648794 218648806 MEF2D JASPAR yes 118459112
SNP sites on vista5111[chr1:218648559-218648794]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 218648570 rs189940641 T G no 949473
chr1 218648579 rs75052853 C T
HMBOX1
949474
chr1 218648712 rs114935802 A G no 949475
chr1 218648716 rs536514090 A G no 949476
Genes possibly regulated by vista5111[chr1:218648559-218648794]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 218683438 218699320 + C1orf143 ENSG00000228208.2 218683438 0.97 0.94 1850 65356
Expression level of Genes
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miRNAs possibly regulated by vista5111[chr1:218648559-218648794]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results