EnhancerDB
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  3. vista51218[chr6:18353568-18353841]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51218[chr6:18353568-18353841]
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Tissue distribution of vista51218
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Transcription factor that possibly regulate vista51218[chr6:18353568-18353841]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 18353580 18353589 SOX9 JASPAR yes 70329392
chr6 18353580 18353589 SOX9 JASPAR yes 100435275
chr6 18353594 18353598 TEAD2 TRANSFAC yes 70329393
chr6 18353594 18353598 TEAD2 TRANSFAC yes 100435276
chr6 18353594 18353599 TBP TRANSFAC yes 70329394
chr6 18353594 18353599 TBP TRANSFAC yes 100435277
chr6 18353602 18353623 ZNF263 JASPAR yes 70329395
chr6 18353602 18353623 ZNF263 JASPAR yes 100435278
chr6 18353606 18353613 CEBPA TRANSFAC yes 70329396
chr6 18353606 18353613 CEBPA TRANSFAC yes 100435279
chr6 18353607 18353618 E2F6 JASPAR yes 70329397
chr6 18353607 18353618 E2F6 JASPAR yes 100435280
chr6 18353622 18353636 BATF3 JASPAR yes 70329398
chr6 18353622 18353636 BATF3 JASPAR yes 100435281
chr6 18353624 18353634 SREBF2 JASPAR yes 70329399
chr6 18353624 18353634 SREBF2 JASPAR yes 100435282
chr6 18353626 18353644 NR3C1 JASPAR yes 70329400
chr6 18353626 18353644 NR3C1 JASPAR yes 100435283
chr6 18353640 18353653 NFKB1 JASPAR yes 70329401
chr6 18353640 18353653 NFKB2 JASPAR yes 70329402
chr6 18353640 18353653 NFKB1 JASPAR yes 100435284
chr6 18353640 18353653 NFKB2 JASPAR yes 100435285
chr6 18353641 18353651 RELA JASPAR yes 70329403
chr6 18353641 18353651 REL JASPAR yes 70329404
chr6 18353641 18353651 RELA JASPAR yes 100435286
chr6 18353641 18353651 REL JASPAR yes 100435287
chr6 18353641 18353652 NFKB1 JASPAR yes 70329405
chr6 18353641 18353652 NFKB1 JASPAR yes 100435288
chr6 18353642 18353652 NFKB1 JASPAR yes 70329406
chr6 18353642 18353652 RELA JASPAR yes 70329407
chr6 18353642 18353652 NFKB1 JASPAR yes 100435289
chr6 18353642 18353652 RELA JASPAR yes 100435290
chr6 18353642 18353653 NFKB1 JASPAR yes 70329408
chr6 18353642 18353653 NFKB1 JASPAR yes 100435291
chr6 18353644 18353649 H4TF1 TRANSFAC yes 70329409
chr6 18353644 18353649 H4TF1 TRANSFAC yes 100435292
chr6 18353653 18353664 NFKB1 JASPAR yes 70329410
chr6 18353653 18353664 NFKB1 JASPAR yes 100435293
chr6 18353657 18353669 E2F8 JASPAR yes 70329411
chr6 18353657 18353669 E2F8 JASPAR yes 100435294
chr6 18353658 18353670 E2F8 JASPAR yes 70329412
chr6 18353658 18353670 E2F8 JASPAR yes 100435295
chr6 18353661 18353667 MZF1 JASPAR yes 70329413
chr6 18353661 18353667 MZF1 JASPAR yes 100435296
chr6 18353669 18353681 PKNOX2 JASPAR yes 70329414
chr6 18353669 18353681 TGIF1 JASPAR yes 70329415
chr6 18353669 18353681 PKNOX2 JASPAR yes 100435297
chr6 18353669 18353681 TGIF1 JASPAR yes 100435298
chr6 18353690 18353701 DMRT3 JASPAR yes 70329416
chr6 18353690 18353701 DMRT3 JASPAR yes 100435299
chr6 18353696 18353706 HOXA13 JASPAR yes 70329417
chr6 18353696 18353706 HOXA13 JASPAR yes 100435300
chr6 18353697 18353701 YY1 TRANSFAC yes 70329418
chr6 18353697 18353701 YY1 TRANSFAC yes 100435301
chr6 18353700 18353706 TBP TRANSFAC yes 70329419
chr6 18353700 18353706 TBP TRANSFAC yes 100435302
chr6 18353743 18353746 MYB TRANSFAC yes 70329420
chr6 18353743 18353746 MYB TRANSFAC yes 100435303
chr6 18353752 18353757 ETS2 TRANSFAC yes 70329421
chr6 18353752 18353757 ETS2 TRANSFAC yes 100435304
chr6 18353771 18353775 YY1 TRANSFAC yes 70329422
chr6 18353771 18353775 YY1 TRANSFAC yes 100435305
chr6 18353789 18353794 MYB TRANSFAC yes 70329423
chr6 18353789 18353794 MYB TRANSFAC yes 100435306
chr6 18353804 18353810 SOX10 JASPAR yes 70329424
chr6 18353804 18353810 SOX10 JASPAR yes 100435307
chr6 18353807 18353818 FOXH1 JASPAR yes 70329425
chr6 18353807 18353818 FOXH1 JASPAR yes 100435308
chr6 18353815 18353836 IRF1 JASPAR yes 70329426
chr6 18353815 18353836 IRF1 JASPAR yes 100435309
chr6 18353817 18353832 STAT2 JASPAR yes 70329427
chr6 18353817 18353832 STAT2 JASPAR yes 100435310
chr6 18353818 18353832 SPI1 JASPAR yes 70329428
chr6 18353818 18353832 SPI1 JASPAR yes 100435311
chr6 18353820 18353841 IRF1 JASPAR yes 70329429
chr6 18353820 18353841 IRF1 JASPAR yes 100435312
chr6 18353821 18353836 FOXP1 JASPAR yes 70329430
chr6 18353821 18353836 FOXP1 JASPAR yes 100435313
chr6 18353822 18353833 FOXP2 JASPAR yes 70329431
chr6 18353822 18353833 FOXP2 JASPAR yes 100435314
chr6 18353822 18353837 STAT2 JASPAR yes 70329432
chr6 18353822 18353837 STAT2 JASPAR yes 100435315
chr6 18353823 18353838 FOXP1 JASPAR yes 70329433
chr6 18353823 18353838 FOXP1 JASPAR yes 100435316
chr6 18353825 18353840 FOXP1 JASPAR yes 70329434
chr6 18353825 18353840 FOXP1 JASPAR yes 100435317
chr6 18353835 18353846 NFIL3 JASPAR yes 70329435
chr6 18353835 18353846 NFIL3 JASPAR yes 100435318
SNP sites on vista51218[chr6:18353568-18353841]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 18353643 rs9371045 G A
NFKB1 NFKB2 NR3C1 REL RELA
8882694
chr6 18353652 rs2031360 C A
NFKB1 NFKB2 RELA
8882695
chr6 18353659 rs146375873 T A
E2F8 NFKB1
8882696
chr6 18353696 rs148558567 T C
DMRT3 HOXA13
8882697
chr6 18353777 rs9477711 T A no 8882698
chr6 18353793 rs2031359 G T
MYB
8882699
Genes possibly regulated by vista51218[chr6:18353568-18353841]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 18224099 18265054 - DEK ENSG00000124795.10 18265054 0.69 0.97 6189 11486
chr6 18368779 18469105 + RNF144B ENSG00000137393.8 18368779 0.87 0.99 6190 85062
Expression level of Genes
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miRNAs possibly regulated by vista51218[chr6:18353568-18353841]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results