EnhancerDB
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  3. vista51220[chr6:18370927-18371512]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51220[chr6:18370927-18371512]
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Tissue distribution of vista51220
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Transcription factor that possibly regulate vista51220[chr6:18370927-18371512]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 18370927 18370931 TEAD2 TRANSFAC yes 70329473
chr6 18370927 18370932 TBP TRANSFAC yes 70329474
chr6 18370928 18370943 FOXP1 JASPAR yes 70329475
chr6 18370928 18370949 IRF1 JASPAR yes 70329476
chr6 18370929 18370944 FOXP1 JASPAR yes 70329477
chr6 18370930 18370945 FOXP1 JASPAR yes 70329478
chr6 18370930 18370951 IRF1 JASPAR yes 70329479
chr6 18370931 18370946 FOXP1 JASPAR yes 70329480
chr6 18370932 18370947 FOXP1 JASPAR yes 70329481
chr6 18370932 18370953 IRF1 JASPAR yes 70329482
chr6 18370933 18370948 FOXP1 JASPAR yes 70329483
chr6 18370936 18370951 PRDM1 JASPAR yes 70329484
chr6 18370936 18370951 STAT2 JASPAR yes 70329485
chr6 18370938 18370959 IRF1 JASPAR yes 70329486
chr6 18370954 18370959 SP1 TRANSFAC yes 70329487
chr6 18370960 18370964 TEAD2 TRANSFAC yes 70329488
chr6 18370962 18370965 MYB TRANSFAC yes 70329489
chr6 18370979 18370989 MYF6 JASPAR yes 70329490
chr6 18370979 18370989 NEUROG2 JASPAR yes 70329491
chr6 18370985 18370996 FOXA1 JASPAR yes 70329492
chr6 18371008 18371024 SOX8 JASPAR yes 70329493
chr6 18371017 18371021 YY1 TRANSFAC yes 70329494
chr6 18371037 18371053 T JASPAR yes 70329495
chr6 18371049 18371062 HSF4 JASPAR yes 70329496
chr6 18371070 18371073 MYB TRANSFAC yes 70329497
chr6 18371074 18371084 BARHL2 JASPAR yes 70329498
chr6 18371082 18371094 HNF1B JASPAR yes 70329499
chr6 18371100 18371104 YY1 TRANSFAC yes 70329500
chr6 18371123 18371127 H1TF2 TRANSFAC yes 70329501
chr6 18371123 18371127 NFE TRANSFAC yes 70329502
chr6 18371123 18371127 SRF TRANSFAC yes 70329503
chr6 18371166 18371169 MYB TRANSFAC yes 70329504
chr6 18371170 18371174 YY1 TRANSFAC yes 70329505
chr6 18371184 18371191 NKX3-1 JASPAR yes 70329506
chr6 18371196 18371206 MEF2A JASPAR yes 70329507
chr6 18371197 18371201 TEAD2 TRANSFAC yes 70329508
chr6 18371199 18371206 POU2F1 TRANSFAC yes 70329509
chr6 18371204 18371212 GATA3 JASPAR yes 70329510
chr6 18371206 18371227 IRF1 JASPAR yes 70329511
chr6 18371211 18371226 FOXP1 JASPAR yes 70329512
chr6 18371212 18371227 FOXP1 JASPAR yes 70329513
chr6 18371213 18371228 FOXP1 JASPAR yes 70329514
chr6 18371214 18371229 FOXP1 JASPAR yes 70329515
chr6 18371215 18371230 FOXP1 JASPAR yes 70329516
chr6 18371216 18371231 FOXP1 JASPAR yes 70329517
chr6 18371218 18371233 FOXP1 JASPAR yes 70329518
chr6 18371218 18371233 MEF2C JASPAR yes 70329519
chr6 18371227 18371231 TEAD2 TRANSFAC yes 70329520
chr6 18371227 18371237 MEOX2 JASPAR yes 70329521
chr6 18371245 18371260 LEF1 JASPAR yes 70329522
chr6 18371266 18371278 TEAD1 JASPAR yes 70329523
chr6 18371321 18371325 TEAD2 TRANSFAC yes 70329524
chr6 18371326 18371338 FOXC2 JASPAR yes 70329525
chr6 18371326 18371341 STAT2 JASPAR yes 70329526
chr6 18371370 18371388 RARA JASPAR yes 70329527
chr6 18371376 18371380 YY1 TRANSFAC yes 70329528
chr6 18371398 18371401 MYB TRANSFAC yes 70329529
chr6 18371405 18371409 NFE TRANSFAC yes 70329530
chr6 18371432 18371437 GATA2 JASPAR yes 70329531
chr6 18371436 18371444 HOXA5 JASPAR yes 70329532
chr6 18371458 18371468 RELA JASPAR yes 70329533
chr6 18371458 18371468 REL JASPAR yes 70329534
chr6 18371458 18371469 NFKB1 JASPAR yes 70329535
chr6 18371459 18371468 NF-kappaB TRANSFAC yes 70329536
chr6 18371462 18371470 FEV JASPAR yes 70329537
chr6 18371464 18371469 ETS2 TRANSFAC yes 70329538
chr6 18371485 18371490 H4TF1 TRANSFAC yes 70329539
chr6 18371485 18371495 ERG JASPAR yes 70329540
chr6 18371485 18371495 ETS1 JASPAR yes 70329541
chr6 18371485 18371496 ETV2 JASPAR yes 70329542
chr6 18371487 18371493 ETS1 JASPAR yes 70329543
chr6 18371495 18371504 NKX2-8 JASPAR yes 70329544
chr6 18371495 18371505 NKX2-3 JASPAR yes 70329545
SNP sites on vista51220[chr6:18370927-18371512]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 18370934 rs11298219 GA G
FOXP1 IRF1
8882814
chr6 18370934 rs398084793 GA G
FOXP1 IRF1
8882815
chr6 18370956 rs535402373 G A
IRF1 SP1
8882816
chr6 18371018 rs554016721 C A
SOX8 YY1
8882817
chr6 18371148 rs145655048 T C no 8882818
chr6 18371156 rs147732549 G T no 8882819
chr6 18371212 rs200467791 CT C
FOXP1 GATA3 IRF1
8882820
chr6 18371212 rs548016716 CT C
FOXP1 GATA3 IRF1
8882821
chr6 18371330 rs545058391 G GT
FOXC2 STAT2
8882822
Genes possibly regulated by vista51220[chr6:18370927-18371512]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 18368779 18469105 + RNF144B ENSG00000137393.8 18368779 0.87 0.99 6190 97852
Expression level of Genes
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miRNAs possibly regulated by vista51220[chr6:18370927-18371512]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results