EnhancerDB
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  3. vista51223[chr6:18402733-18403120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51223[chr6:18402733-18403120]
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Tissue distribution of vista51223
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Transcription factor that possibly regulate vista51223[chr6:18402733-18403120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 18402756 18402761 ETS2 TRANSFAC yes 70329702
chr6 18402780 18402793 POU2F2 JASPAR yes 70329703
chr6 18402780 18402794 POU1F1 JASPAR yes 70329704
chr6 18402781 18402793 POU3F1 JASPAR yes 70329705
chr6 18402781 18402793 POU3F2 JASPAR yes 70329706
chr6 18402781 18402794 POU3F3 JASPAR yes 70329707
chr6 18402782 18402786 YY1 TRANSFAC yes 70329708
chr6 18402782 18402794 POU2F1 JASPAR yes 70329709
chr6 18402783 18402790 POU2F1 TRANSFAC yes 70329710
chr6 18402783 18402790 POU2F2C TRANSFAC yes 70329711
chr6 18402783 18402790 POU2F2 TRANSFAC yes 70329712
chr6 18402783 18402791 POU2F1 TRANSFAC yes 70329713
chr6 18402783 18402792 POU3F4 JASPAR yes 70329714
chr6 18402783 18402792 POU5F1B JASPAR yes 70329715
chr6 18402809 18402820 RUNX1 JASPAR yes 70329716
chr6 18402810 18402820 RUNX3 JASPAR yes 70329717
chr6 18402811 18402820 RUNX2 JASPAR yes 70329718
chr6 18402813 18402834 IRF1 JASPAR yes 70329719
chr6 18402817 18402832 PRDM1 JASPAR yes 70329720
chr6 18402837 18402852 FOXP1 JASPAR yes 70329721
chr6 18402840 18402848 FOXO3 JASPAR yes 70329722
chr6 18402861 18402879 RARA JASPAR yes 70329723
chr6 18402862 18402866 YY1 TRANSFAC yes 70329724
chr6 18402865 18402879 RXRB JASPAR yes 70329725
chr6 18402865 18402880 LEF1 JASPAR yes 70329726
chr6 18402865 18402880 NR2C2 JASPAR yes 70329727
chr6 18402904 18402913 THAP1 JASPAR yes 70329728
chr6 18402943 18402947 YY1 TRANSFAC yes 70329729
chr6 18402962 18402976 POU1F1 JASPAR yes 70329730
chr6 18402962 18402977 MEF2C JASPAR yes 70329731
chr6 18402963 18402975 POU3F1 JASPAR yes 70329732
chr6 18402963 18402975 POU3F2 JASPAR yes 70329733
chr6 18402963 18402978 MEF2A JASPAR yes 70329734
chr6 18402965 18402974 POU5F1B JASPAR yes 70329735
chr6 18402972 18402975 MYB TRANSFAC yes 70329736
chr6 18402981 18402995 STAT1 JASPAR yes 70329737
chr6 18402983 18402995 TEAD1 JASPAR yes 70329738
chr6 18402985 18402990 ETS2 TRANSFAC yes 70329739
chr6 18402985 18402995 TEAD1 JASPAR yes 70329740
chr6 18402985 18402995 TEAD4 JASPAR yes 70329741
chr6 18402986 18402994 TEAD3 JASPAR yes 70329742
chr6 18403015 18403021 YY1 JASPAR yes 70329743
chr6 18403060 18403072 YY1 JASPAR yes 70329744
chr6 18403076 18403091 FOXA1 JASPAR yes 70329745
chr6 18403080 18403091 FOXA1 JASPAR yes 70329746
chr6 18403088 18403104 POU4F2 JASPAR yes 70329747
chr6 18403095 18403107 POU2F1 JASPAR yes 70329748
chr6 18403095 18403108 POU3F3 JASPAR yes 70329749
chr6 18403095 18403109 POU1F1 JASPAR yes 70329750
SNP sites on vista51223[chr6:18402733-18403120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 18402909 rs377133432 C T
THAP1
8883057
chr6 18402949 rs182583677 C A no 8883058
chr6 18402992 rs9477735 T A
STAT1 TEAD1 TEAD3 TEAD4
8883059
chr6 18403004 rs563345292 T C no 8883060
Genes possibly regulated by vista51223[chr6:18402733-18403120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 18368779 18469105 + RNF144B ENSG00000137393.8 18368779 0.87 0.99 6190 66046
Expression level of Genes
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miRNAs possibly regulated by vista51223[chr6:18402733-18403120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results