EnhancerDB
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  3. vista51226[chr6:18407685-18408142]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51226[chr6:18407685-18408142]
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Tissue distribution of vista51226
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Transcription factor that possibly regulate vista51226[chr6:18407685-18408142]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 18407682 18407689 NKX3-1 JASPAR yes 70329847
chr6 18407682 18407689 NKX3-1 JASPAR yes 100439665
chr6 18407726 18407736 MEF2A JASPAR yes 70329848
chr6 18407726 18407736 MEF2A JASPAR yes 100439666
chr6 18407730 18407745 RUNX2 JASPAR yes 70329849
chr6 18407730 18407745 RUNX2 JASPAR yes 100439667
chr6 18407733 18407744 RUNX1 JASPAR yes 70329850
chr6 18407733 18407744 RUNX1 JASPAR yes 100439668
chr6 18407770 18407775 NFY TRANSFAC yes 70329851
chr6 18407770 18407775 NFY TRANSFAC yes 100439669
chr6 18407774 18407784 NFKB1 JASPAR yes 70329852
chr6 18407774 18407784 NFKB1 JASPAR yes 100439670
chr6 18407776 18407793 ZNF410 JASPAR yes 70329853
chr6 18407776 18407793 ZNF410 JASPAR yes 100439671
chr6 18407784 18407805 MAFG JASPAR yes 70329854
chr6 18407784 18407805 MAFG JASPAR yes 100439672
chr6 18407795 18407805 PAX7 JASPAR yes 70329855
chr6 18407795 18407805 PAX7 JASPAR yes 100439673
chr6 18407799 18407814 STAT1 JASPAR yes 70329856
chr6 18407799 18407814 STAT1 JASPAR yes 100439674
chr6 18407804 18407814 NFATC3 JASPAR yes 70329857
chr6 18407804 18407814 NFATC3 JASPAR yes 100439675
chr6 18407813 18407828 IRF9 JASPAR yes 70329858
chr6 18407813 18407828 IRF9 JASPAR yes 100439676
chr6 18407814 18407828 IRF7 JASPAR yes 70329859
chr6 18407814 18407828 IRF8 JASPAR yes 70329860
chr6 18407814 18407828 IRF7 JASPAR yes 100439677
chr6 18407814 18407828 IRF8 JASPAR yes 100439678
chr6 18407815 18407830 STAT2 JASPAR yes 70329861
chr6 18407815 18407830 STAT2 JASPAR yes 100439679
chr6 18407819 18407824 MYB TRANSFAC yes 70329862
chr6 18407819 18407824 MYB TRANSFAC yes 100439680
chr6 18407822 18407834 YY1 JASPAR yes 70329863
chr6 18407822 18407834 YY1 JASPAR yes 100439681
chr6 18407830 18407836 TCF4 TRANSFAC yes 70329864
chr6 18407830 18407836 TCF4 TRANSFAC yes 100439682
chr6 18407844 18407848 YY1 TRANSFAC yes 70329865
chr6 18407844 18407848 YY1 TRANSFAC yes 100439683
chr6 18407849 18407861 GRHL1 JASPAR yes 70329866
chr6 18407849 18407861 GRHL1 JASPAR yes 100439684
chr6 18407850 18407860 TFCP2 JASPAR yes 70329867
chr6 18407850 18407860 TFCP2 JASPAR yes 100439685
chr6 18407851 18407870 RFX2 JASPAR yes 70329868
chr6 18407851 18407870 RFX2 JASPAR yes 100439686
chr6 18407859 18407871 POU2F1 JASPAR yes 70329869
chr6 18407859 18407871 POU2F1 JASPAR yes 100439687
chr6 18407859 18407872 POU3F3 JASPAR yes 70329870
chr6 18407859 18407872 POU3F3 JASPAR yes 100439688
chr6 18407859 18407873 POU1F1 JASPAR yes 70329871
chr6 18407859 18407873 POU1F1 JASPAR yes 100439689
chr6 18407860 18407872 POU3F1 JASPAR yes 70329872
chr6 18407860 18407872 POU3F2 JASPAR yes 70329873
chr6 18407860 18407872 POU3F1 JASPAR yes 100439690
chr6 18407860 18407872 POU3F2 JASPAR yes 100439691
chr6 18407860 18407873 POU2F2 JASPAR yes 70329874
chr6 18407860 18407873 POU2F2 JASPAR yes 100439692
chr6 18407861 18407869 FOXL1 JASPAR yes 70329875
chr6 18407861 18407869 FOXL1 JASPAR yes 100439693
chr6 18407861 18407870 POU3F4 JASPAR yes 70329876
chr6 18407861 18407870 POU5F1B JASPAR yes 70329877
chr6 18407861 18407870 POU3F4 JASPAR yes 100439694
chr6 18407861 18407870 POU5F1B JASPAR yes 100439695
chr6 18407872 18407875 MYB TRANSFAC yes 70329878
chr6 18407872 18407875 MYB TRANSFAC yes 100439696
chr6 18407885 18407895 ETV6 JASPAR yes 70329879
chr6 18407885 18407895 ETV6 JASPAR yes 100439697
chr6 18407896 18407910 IRF7 JASPAR yes 70329880
chr6 18407896 18407910 IRF7 JASPAR yes 100439698
chr6 18407898 18407913 SOX21 JASPAR yes 70329881
chr6 18407898 18407913 SOX21 JASPAR yes 100439699
chr6 18407922 18407932 HOXD11 JASPAR yes 70329882
chr6 18407922 18407932 HOXD11 JASPAR yes 100439700
chr6 18407922 18407933 HOXC12 JASPAR yes 70329883
chr6 18407922 18407933 HOXC12 JASPAR yes 100439701
chr6 18407970 18407974 YY1 TRANSFAC yes 70329884
chr6 18407970 18407974 YY1 TRANSFAC yes 100439702
chr6 18407978 18407989 ESRRB JASPAR yes 70329885
chr6 18407978 18407989 ESRRB JASPAR yes 100439703
chr6 18407978 18407992 GATA2 JASPAR yes 70329886
chr6 18407978 18407992 GATA2 JASPAR yes 100439704
chr6 18407999 18408005 SP1 TRANSFAC yes 70329887
chr6 18407999 18408005 SP1 TRANSFAC yes 100439705
chr6 18408000 18408005 SP1 TRANSFAC yes 70329888
chr6 18408000 18408005 SP1 TRANSFAC yes 100439706
chr6 18408000 18408012 HINFP JASPAR yes 70329889
chr6 18408000 18408012 HINFP JASPAR yes 100439707
chr6 18408006 18408011 ATF1 TRANSFAC yes 70329890
chr6 18408006 18408011 ATF1 TRANSFAC yes 100439708
chr6 18408012 18408023 FOS JASPAR yes 70329891
chr6 18408012 18408023 FOS JASPAR yes 100439709
chr6 18408013 18408022 JDP2 JASPAR yes 70329892
chr6 18408013 18408022 JDP2 JASPAR yes 100439710
chr6 18408013 18408025 HNF1B JASPAR yes 70329893
chr6 18408013 18408025 HNF1B JASPAR yes 100439711
chr6 18408017 18408033 POU4F2 JASPAR yes 70329894
chr6 18408017 18408033 POU4F3 JASPAR yes 70329895
chr6 18408017 18408033 POU4F2 JASPAR yes 100439712
chr6 18408017 18408033 POU4F3 JASPAR yes 100439713
chr6 18408047 18408051 H1TF2 TRANSFAC yes 70329896
chr6 18408047 18408051 NFE TRANSFAC yes 70329897
chr6 18408047 18408051 SRF TRANSFAC yes 70329898
chr6 18408047 18408051 H1TF2 TRANSFAC yes 100439714
chr6 18408047 18408051 NFE TRANSFAC yes 100439715
chr6 18408047 18408051 SRF TRANSFAC yes 100439716
chr6 18408053 18408061 FEV JASPAR yes 70329899
chr6 18408053 18408061 FEV JASPAR yes 100439717
chr6 18408067 18408071 NFE TRANSFAC yes 70329900
chr6 18408067 18408071 NFE TRANSFAC yes 100439718
chr6 18408067 18408072 GATA1 TRANSFAC yes 70329901
chr6 18408067 18408072 GATA1 TRANSFAC yes 100439719
chr6 18408067 18408073 GATA3 JASPAR yes 70329902
chr6 18408067 18408073 GATA3 JASPAR yes 100439720
chr6 18408098 18408113 STAT2 JASPAR yes 70329903
chr6 18408098 18408113 STAT2 JASPAR yes 100439721
chr6 18408104 18408108 H1TF2 TRANSFAC yes 70329904
chr6 18408104 18408108 NFE TRANSFAC yes 70329905
chr6 18408104 18408108 SRF TRANSFAC yes 70329906
chr6 18408104 18408108 H1TF2 TRANSFAC yes 100439722
chr6 18408104 18408108 NFE TRANSFAC yes 100439723
chr6 18408104 18408108 SRF TRANSFAC yes 100439724
chr6 18408109 18408117 MEIS2 JASPAR yes 70329907
chr6 18408109 18408117 MEIS2 JASPAR yes 100439725
chr6 18408109 18408120 FOXB1 JASPAR yes 70329908
chr6 18408109 18408120 FOXB1 JASPAR yes 100439726
chr6 18408110 18408114 NFE TRANSFAC yes 70329909
chr6 18408110 18408114 NFE TRANSFAC yes 100439727
chr6 18408110 18408117 MEIS1 JASPAR yes 70329910
chr6 18408110 18408117 MEIS1 JASPAR yes 100439728
chr6 18408117 18408120 MYB TRANSFAC yes 70329911
chr6 18408117 18408120 MYB TRANSFAC yes 100439729
chr6 18408140 18408144 YY1 TRANSFAC yes 70329912
chr6 18408140 18408144 YY1 TRANSFAC yes 100439730
SNP sites on vista51226[chr6:18407685-18408142]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 18407714 rs187482258 A G no 8883120
chr6 18407718 rs1408262 A T no 8883121
chr6 18407743 rs1408263 T C
RUNX1 RUNX2
8883122
chr6 18408005 rs116022166 G A
HINFP SP1
8883123
chr6 18408090 rs184788322 G T no 8883124
chr6 18408099 rs1359230 T C
STAT2
8883125
chr6 18408132 rs552992521 G A no 8883126
Genes possibly regulated by vista51226[chr6:18407685-18408142]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 18368779 18469105 + RNF144B ENSG00000137393.8 18368779 0.87 0.99 6190 61094
Expression level of Genes
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miRNAs possibly regulated by vista51226[chr6:18407685-18408142]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results