EnhancerDB
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  3. vista51227[chr6:18412355-18412775]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51227[chr6:18412355-18412775]
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Tissue distribution of vista51227
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Transcription factor that possibly regulate vista51227[chr6:18412355-18412775]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 18412340 18412355 MEF2C JASPAR yes 70329913
chr6 18412340 18412355 MEF2C JASPAR yes 100440524
chr6 18412341 18412356 MEF2A JASPAR yes 70329914
chr6 18412341 18412356 MEF2A JASPAR yes 100440525
chr6 18412353 18412364 CEBPB JASPAR yes 70329915
chr6 18412353 18412364 CEBPB JASPAR yes 100440527
chr6 18412353 18412365 HLF JASPAR yes 70329916
chr6 18412353 18412365 HLF JASPAR yes 100440528
chr6 18412354 18412365 CEBPA JASPAR yes 70329917
chr6 18412354 18412365 CEBPA JASPAR yes 100440529
chr6 18412359 18412374 MEF2C JASPAR yes 70329918
chr6 18412359 18412374 MEF2C JASPAR yes 100440530
chr6 18412360 18412363 MYB TRANSFAC yes 70329919
chr6 18412360 18412363 MYB TRANSFAC yes 100440531
chr6 18412360 18412371 RUNX1 JASPAR yes 70329920
chr6 18412360 18412371 RUNX1 JASPAR yes 100440532
chr6 18412374 18412390 POU4F2 JASPAR yes 70329921
chr6 18412374 18412390 POU4F3 JASPAR yes 70329922
chr6 18412374 18412390 POU4F2 JASPAR yes 100440533
chr6 18412374 18412390 POU4F3 JASPAR yes 100440534
chr6 18412377 18412381 YY1 TRANSFAC yes 70329923
chr6 18412377 18412381 YY1 TRANSFAC yes 100440535
chr6 18412402 18412410 HOXA5 JASPAR yes 70329924
chr6 18412402 18412410 HOXA5 JASPAR yes 100440536
chr6 18412411 18412426 SCRT1 JASPAR yes 70329925
chr6 18412411 18412426 SCRT1 JASPAR yes 100440537
chr6 18412419 18412430 CEBPA JASPAR yes 70329926
chr6 18412419 18412430 CEBPA JASPAR yes 100440538
chr6 18412426 18412441 RFX5 JASPAR yes 70329927
chr6 18412426 18412441 RFX5 JASPAR yes 100440539
chr6 18412429 18412438 NFIX JASPAR yes 70329928
chr6 18412429 18412438 NFIX JASPAR yes 100440540
chr6 18412430 18412436 NFIC JASPAR yes 70329929
chr6 18412430 18412436 NFIC JASPAR yes 100440541
chr6 18412451 18412466 HNF4G JASPAR yes 70329930
chr6 18412451 18412466 HNF4G JASPAR yes 100440542
chr6 18412452 18412467 HNF4A JASPAR yes 70329931
chr6 18412452 18412467 HNF4A JASPAR yes 100440543
chr6 18412484 18412488 YY1 TRANSFAC yes 70329932
chr6 18412484 18412488 YY1 TRANSFAC yes 100440544
chr6 18412485 18412495 NFATC3 JASPAR yes 70329933
chr6 18412485 18412495 NFATC3 JASPAR yes 100440545
chr6 18412486 18412493 NFATC2 JASPAR yes 70329934
chr6 18412486 18412493 NFATC2 JASPAR yes 100440546
chr6 18412542 18412550 RHOXF1 JASPAR yes 70329935
chr6 18412542 18412550 RHOXF1 JASPAR yes 100440547
chr6 18412549 18412560 FLI1 JASPAR yes 70329936
chr6 18412549 18412560 FLI1 JASPAR yes 100440548
chr6 18412549 18412562 ELF3 JASPAR yes 70329937
chr6 18412549 18412562 ELF3 JASPAR yes 100440549
chr6 18412550 18412560 ETV6 JASPAR yes 70329938
chr6 18412550 18412560 ETV6 JASPAR yes 100440550
chr6 18412550 18412561 ELF5 JASPAR yes 70329939
chr6 18412550 18412561 ETV2 JASPAR yes 70329940
chr6 18412550 18412561 ELF5 JASPAR yes 100440551
chr6 18412550 18412561 ETV2 JASPAR yes 100440552
chr6 18412550 18412562 EHF JASPAR yes 70329941
chr6 18412550 18412562 ELF1 JASPAR yes 70329942
chr6 18412550 18412562 ELF4 JASPAR yes 70329943
chr6 18412550 18412562 EHF JASPAR yes 100440553
chr6 18412550 18412562 ELF1 JASPAR yes 100440554
chr6 18412550 18412562 ELF4 JASPAR yes 100440555
chr6 18412550 18412563 ELF1 JASPAR yes 70329944
chr6 18412550 18412563 ELF1 JASPAR yes 100440556
chr6 18412550 18412564 SPI1 JASPAR yes 70329945
chr6 18412550 18412564 SPIC JASPAR yes 70329946
chr6 18412550 18412564 SPI1 JASPAR yes 100440557
chr6 18412550 18412564 SPIC JASPAR yes 100440558
chr6 18412551 18412558 SPI1 JASPAR yes 70329947
chr6 18412551 18412558 SPI1 JASPAR yes 100440559
chr6 18412551 18412559 EHF JASPAR yes 70329948
chr6 18412551 18412559 EHF JASPAR yes 100440560
chr6 18412553 18412560 SPIB JASPAR yes 70329949
chr6 18412553 18412560 SPIB JASPAR yes 100440561
chr6 18412556 18412566 MEF2A JASPAR yes 70329950
chr6 18412556 18412566 MEF2A JASPAR yes 100440562
chr6 18412565 18412571 PEA3 TRANSFAC yes 70329951
chr6 18412565 18412571 PEA3 TRANSFAC yes 100440563
chr6 18412565 18412576 FLI1 JASPAR yes 70329952
chr6 18412565 18412576 FLI1 JASPAR yes 100440564
chr6 18412568 18412586 NR3C1 JASPAR yes 70329953
chr6 18412568 18412586 NR3C1 JASPAR yes 100440565
chr6 18412606 18412610 NFE TRANSFAC yes 70329954
chr6 18412606 18412610 NFE TRANSFAC yes 100440566
chr6 18412606 18412611 GATA1 TRANSFAC yes 70329955
chr6 18412606 18412611 GATA1 TRANSFAC yes 100440567
chr6 18412606 18412612 GATA3 JASPAR yes 70329956
chr6 18412606 18412612 GATA3 JASPAR yes 100440568
chr6 18412613 18412619 TBP TRANSFAC yes 70329957
chr6 18412613 18412619 TBP TRANSFAC yes 100440569
chr6 18412635 18412646 GCM1 JASPAR yes 70329958
chr6 18412635 18412646 GCM1 JASPAR yes 100440570
chr6 18412668 18412680 MEF2A JASPAR yes 70329959
chr6 18412668 18412680 MEF2B JASPAR yes 70329960
chr6 18412668 18412680 MEF2D JASPAR yes 70329961
chr6 18412668 18412680 MEF2A JASPAR yes 100440571
chr6 18412668 18412680 MEF2B JASPAR yes 100440572
chr6 18412668 18412680 MEF2D JASPAR yes 100440573
chr6 18412677 18412687 MEOX2 JASPAR yes 70329962
chr6 18412677 18412687 MEOX2 JASPAR yes 100440574
chr6 18412679 18412690 PHOX2A JASPAR yes 70329963
chr6 18412679 18412690 PROP1 JASPAR yes 70329964
chr6 18412679 18412690 PHOX2A JASPAR yes 100440575
chr6 18412679 18412690 PROP1 JASPAR yes 100440576
chr6 18412692 18412710 E2F3 JASPAR yes 70329965
chr6 18412692 18412710 E2F3 JASPAR yes 100440577
chr6 18412693 18412709 E2F2 JASPAR yes 70329966
chr6 18412693 18412709 E2F2 JASPAR yes 100440578
chr6 18412747 18412763 SOX4 JASPAR yes 70329967
chr6 18412747 18412763 SOX4 JASPAR yes 100440579
chr6 18412748 18412760 YY1 JASPAR yes 70329968
chr6 18412748 18412760 YY1 JASPAR yes 100440580
chr6 18412748 18412763 SOX21 JASPAR yes 70329969
chr6 18412748 18412763 SOX21 JASPAR yes 100440581
SNP sites on vista51227[chr6:18412355-18412775]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 18412407 rs547656358 A G
HOXA5
8883207
chr6 18412469 rs6931433 C G no 8883208
chr6 18412478 rs115898737 C G no 8883209
chr6 18412503 rs147452764 C T no 8883210
chr6 18412566 rs555319549 G A
FLI1 MEF2A PEA3
8883211
chr6 18412577 rs9465139 A G
NR3C1
8883212
Genes possibly regulated by vista51227[chr6:18412355-18412775]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 18368779 18469105 + RNF144B ENSG00000137393.8 18368779 0.87 0.99 6190 56424
Expression level of Genes
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miRNAs possibly regulated by vista51227[chr6:18412355-18412775]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results