EnhancerDB
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  3. vista51330[chr6:24313904-24313964]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51330[chr6:24313904-24313964]
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Tissue distribution of vista51330
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Transcription factor that possibly regulate vista51330[chr6:24313904-24313964]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 24313567 24314043 EP300 UCSC Txn Factor no Conserved 108539067
chr6 24313569 24314034 TCF12 UCSC Txn Factor no Conserved 108539068
chr6 24313576 24314046 GATA3 UCSC Txn Factor no Conserved 108539069
chr6 24313592 24313972 ARID3A UCSC Txn Factor no Conserved 108539070
chr6 24313595 24313997 TEAD4 UCSC Txn Factor no Conserved 108539071
chr6 24313671 24313942 FOXA1 UCSC Txn Factor no Conserved 108539072
chr6 24313674 24313920 FOXA2 UCSC Txn Factor no Conserved 108539073
chr6 24313707 24313952 CEBPB UCSC Txn Factor no Conserved 108539074
chr6 24313928 24313937 NFIX JASPAR yes 70334681
chr6 24313928 24313937 NFIX JASPAR yes 100774626
chr6 24313928 24313938 NFIA JASPAR yes 70334682
chr6 24313928 24313938 NFIA JASPAR yes 100774627
chr6 24313929 24313938 HIC2 JASPAR yes 70334683
chr6 24313929 24313938 HIC2 JASPAR yes 100774628
chr6 24313930 24313936 NFIC JASPAR yes 70334684
chr6 24313930 24313936 NFIC JASPAR yes 100774629
chr6 24313942 24313956 RORA JASPAR yes 70334685
chr6 24313942 24313956 RORA JASPAR yes 100774630
SNP sites on vista51330[chr6:24313904-24313964]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 24313912 rs114768379 G A
ARID3A CEBPB EP300 FOXA1 FOXA2 GATA3 TCF12 TEAD4
8914030
Genes possibly regulated by vista51330[chr6:24313904-24313964]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 24171984 24358280 - DCDC2 ENSG00000146038.7 24358280 0.99 0.98 6199 55684
chr6 24357131 24358512 + KAAG1 ENSG00000146049.1 24357131 0.99 0.97 6200 56833
chr6 24403153 24425810 + MRS2 ENSG00000124532.10 24403153 0.67 0.99 6201 10811
Expression level of Genes
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miRNAs possibly regulated by vista51330[chr6:24313904-24313964]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results