EnhancerDB
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  3. vista51341[chr6:24686171-24686408]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51341[chr6:24686171-24686408]
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Tissue distribution of vista51341
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Transcription factor that possibly regulate vista51341[chr6:24686171-24686408]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 24686180 24686194 PLAG1 JASPAR yes 70335040
chr6 24686187 24686195 TBX15 JASPAR yes 70335041
chr6 24686188 24686193 SP1 TRANSFAC yes 70335042
chr6 24686196 24686211 TFAP2A JASPAR yes 70335043
chr6 24686196 24686211 TFAP2C JASPAR yes 70335044
chr6 24686197 24686209 PBX1 JASPAR yes 70335045
chr6 24686199 24686211 TFAP2A JASPAR yes 70335046
chr6 24686203 24686212 THAP1 JASPAR yes 70335047
chr6 24686204 24686222 RARA JASPAR yes 70335048
chr6 24686206 24686210 LFA1 TRANSFAC yes 70335049
chr6 24686218 24686230 GLI2 JASPAR yes 70335050
chr6 24686232 24686235 MYB TRANSFAC yes 70335051
chr6 24686239 24686252 SMAD2 JASPAR yes 70335052
chr6 24686258 24686273 MEF2C JASPAR yes 70335053
chr6 24686262 24686268 TBP TRANSFAC yes 70335054
chr6 24686263 24686277 SPIC JASPAR yes 70335055
chr6 24686266 24686281 FOXP1 JASPAR yes 70335056
chr6 24686266 24686287 IRF1 JASPAR yes 70335057
chr6 24686267 24686282 FOXP1 JASPAR yes 70335058
chr6 24686268 24686273 ETS2 TRANSFAC yes 70335059
chr6 24686268 24686289 IRF1 JASPAR yes 70335060
chr6 24686269 24686284 FOXP1 JASPAR yes 70335061
chr6 24686279 24686294 MYBL2 JASPAR yes 70335062
chr6 24686281 24686293 MYBL1 JASPAR yes 70335063
chr6 24686286 24686289 MYB TRANSFAC yes 70335064
chr6 24686316 24686320 TEAD2 TRANSFAC yes 70335065
chr6 24686316 24686321 TBP TRANSFAC yes 70335066
chr6 24686320 24686328 NR4A2 JASPAR yes 70335067
chr6 24686335 24686346 FOXB1 JASPAR yes 70335068
chr6 24686335 24686346 FOXC1 JASPAR yes 70335069
chr6 24686335 24686347 FOXC2 JASPAR yes 70335070
chr6 24686338 24686346 FOXO3 JASPAR yes 70335071
chr6 24686347 24686363 ZNF143 JASPAR yes 70335072
chr6 24686348 24686355 NKX3-1 JASPAR yes 70335073
chr6 24686362 24686372 MEF2A JASPAR yes 70335074
chr6 24686363 24686367 TEAD2 TRANSFAC yes 70335075
chr6 24686363 24686368 TBP TRANSFAC yes 70335076
chr6 24686376 24686379 MYB TRANSFAC yes 70335077
chr6 24686376 24686387 RUNX1 JASPAR yes 70335078
chr6 24686379 24686388 SOX9 JASPAR yes 70335079
chr6 24686387 24686394 E2F1 TRANSFAC yes 70335080
SNP sites on vista51341[chr6:24686171-24686408]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 24686209 rs184840415 G A
LFA1 PBX1 RARA TFAP2A TFAP2C THAP1
8915666
chr6 24686291 rs4712839 C A
MYBL1 MYBL2
8915667
chr6 24686385 rs148691887 GT G
RUNX1 SOX9
8915668
Genes possibly regulated by vista51341[chr6:24686171-24686408]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 24544332 24646383 - KIAA0319 ENSG00000137261.9 24646383 0.88 0.99 6204 60212
chr6 24650205 24667261 - TDP2 ENSG00000111802.9 24667261 0.71 0.98 6205 81090
chr6 24667263 24705293 + ACOT13 ENSG00000112304.6 24667263 0.83 0.99 6206 81092
chr6 24705089 24721064 - C6orf62 ENSG00000112308.8 24721064 0.73 0.99 6207 65344
chr6 24775159 24786327 + GMNN ENSG00000112312.5 24775159 0.86 0.97 6208 11249
Expression level of Genes
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miRNAs possibly regulated by vista51341[chr6:24686171-24686408]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results